Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p61990 Brassica napus HOM05D004904 ORTHO05D027820 5.6e-85 317.4 142 100.0
C07p62000 Brassica napus HOM05D004904 ORTHO05D027820 5.6e-85 317.4 142 100.0
BolC7t46619H Brassica oleracea HOM05D004904 ORTHO05D027820 5.6e-85 317.4 142 100.0
C07p62010 Brassica napus HOM05D004904 ORTHO05D027820 3.8e-81 304.7 136 100.0
C07p62020 Brassica napus HOM05D004904 ORTHO05D012458 1.0e-65 253.4 142 83.8
C07p62040 Brassica napus HOM05D004904 ORTHO05D012458 9.3e-64 246.9 143 82.5
BolC7t46620H Brassica oleracea HOM05D004904 ORTHO05D106633 1.8e-59 232.6 105 99.0
C08p44250 Brassica napus HOM05D004904 ORTHO05D012458 1.4e-30 136.7 140 50.0
BraA09t41444Z Brassica rapa HOM05D004904 ORTHO05D012458 1.4e-30 136.7 139 50.4
BraA09t41446Z Brassica rapa HOM05D004904 ORTHO05D012458 1.4e-30 136.7 140 50.0
BolC4t25152H Brassica oleracea HOM05D004904 ORTHO05D012458 4.0e-30 135.2 140 50.7
BraA04t16123Z Brassica rapa HOM05D004904 ORTHO05D012458 2.0e-29 132.9 140 50.0
C08p44310 Brassica napus HOM05D004904 ORTHO05D012458 5.7e-29 131.3 143 50.3
BolC8t51974H Brassica oleracea HOM05D004904 ORTHO05D012458 5.7e-29 131.3 143 50.3
BolC8t51971H Brassica oleracea HOM05D004904 ORTHO05D012458 1.6e-26 123.2 128 48.4
Carub.0001s4015 Capsella rubella HOM05D004904 ORTHO05D012458 1.7e-17 93.2 143 39.9
AL1G57680 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 1.2e-15 87.0 142 39.4
CARHR220080 Cardamine hirsuta HOM05D004904 ORTHO05D012458 4.7e-15 85.1 142 34.5
AT1G51240 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 6.1e-15 84.7 143 37.1
AT1G51250 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 8.0e-15 84.3 143 36.4
Carub.0001s4014 Capsella rubella HOM05D004904 ORTHO05D012458 1.4e-14 83.6 143 36.4
CARHR041320 Cardamine hirsuta HOM05D004904 ORTHO05D012458 3.0e-14 82.4 143 37.1
AL1G59040 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 2.6e-13 79.3 131 38.9
A09p07740 Brassica napus HOM05D004904 ORTHO05D010762 4.4e-13 78.6 143 36.4
C09p08640 Brassica napus HOM05D004904 ORTHO05D010762 3.7e-12 75.5 145 36.6
BolC9t53775H Brassica oleracea HOM05D004904 ORTHO05D010762 3.7e-12 75.5 145 36.6
AL1G59050 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 4.9e-12 75.1 131 36.6
A09p07720 Brassica napus HOM05D004904 ORTHO05D010762 4.9e-12 75.1 145 36.6
Thhalv10029524m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 8.3e-12 74.3 138 36.2
BcaB06g25859 Brassica carinata HOM05D004904 ORTHO05D010762 1.4e-11 73.6 130 36.2
A02p42370 Brassica napus HOM05D004904 ORTHO05D010762 1.4e-11 73.6 141 33.3
BraA02t09168Z Brassica rapa HOM05D004904 ORTHO05D010762 1.4e-11 73.6 141 33.3
BcaC04g23408 Brassica carinata HOM05D004904 ORTHO05D010762 2.4e-11 72.8 141 34.0
C09p08630 Brassica napus HOM05D004904 ORTHO05D010762 2.4e-11 72.8 141 34.0
BolC2t12283H Brassica oleracea HOM05D004904 ORTHO05D010762 2.4e-11 72.8 141 31.9
BolC9t53774H Brassica oleracea HOM05D004904 ORTHO05D010762 2.4e-11 72.8 141 34.0
BolC6t38173H Brassica oleracea HOM05D004904 ORTHO05D012610 5.4e-11 71.6 144 36.8
AL7G45630 Arabidopsis lyrata HOM05D002460 ORTHO05D002716 1.2e-10 70.5 131 34.4
BraA09t36422Z Brassica rapa HOM05D004904 ORTHO05D010762 1.2e-10 70.5 145 35.2
BcaC04g23406 Brassica carinata HOM05D004904 ORTHO05D010762 1.6e-10 70.1 145 34.5
C09p50630 Brassica napus HOM05D004904 ORTHO05D010762 1.6e-10 70.1 145 35.2
BolC9t57916H Brassica oleracea HOM05D004904 ORTHO05D010762 1.6e-10 70.1 145 35.2
CARHR102040 Cardamine hirsuta HOM05D004904 ORTHO05D012610 1.6e-10 70.1 143 32.9
CARHR112870 Cardamine hirsuta HOM05D004904 ORTHO05D010762 1.6e-10 70.1 150 36.0
BolC9t53777H Brassica oleracea HOM05D004904 ORTHO05D010762 2.0e-10 69.7 145 34.5
AT1G51230 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 2.7e-10 69.3 130 34.6
A09p07760 Brassica napus HOM05D004904 ORTHO05D010762 2.7e-10 69.3 145 34.5
BraA09t36424Z Brassica rapa HOM05D004904 ORTHO05D010762 2.7e-10 69.3 145 34.5
AL6G36930 Arabidopsis lyrata HOM05D004904 ORTHO05D010762 4.5e-10 68.6 130 33.8
BraA09t36421Z Brassica rapa HOM05D004904 ORTHO05D010762 5.9e-10 68.2 141 34.0
A09p07710 Brassica napus HOM05D004904 ORTHO05D010762 7.8e-10 67.8 141 34.0
Thhalv10014983m.g Eutrema salsugineum HOM05D004904 ORTHO05D012993 1.0e-09 67.4 142 34.5
AL7G45640 Arabidopsis lyrata HOM05D004904 ORTHO05D010762 1.3e-09 67.0 134 35.1
A10p15680 Brassica napus HOM05D004904 ORTHO05D010762 1.3e-09 67.0 145 34.5
BraA10t43666Z Brassica rapa HOM05D004904 ORTHO05D010762 1.3e-09 67.0 145 34.5
CARHR216060 Cardamine hirsuta HOM05D004904 ORTHO05D010762 1.3e-09 67.0 141 34.0
CARHR216070 Cardamine hirsuta HOM05D004904 ORTHO05D010762 1.3e-09 67.0 142 32.4
Thhalv10002784m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 1.7e-09 66.6 146 34.9
Thhalv10000458m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 2.3e-09 66.2 148 35.1
Thhalv10005414m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 2.9e-09 65.9 142 35.2
CARHR057800 Cardamine hirsuta HOM05D004904 ORTHO05D010762 3.8e-09 65.5 141 34.0
C06p30060 Brassica napus HOM05D004904 ORTHO05D012610 6.6e-09 64.7 144 35.4
BolC6t38167H Brassica oleracea HOM05D004904 ORTHO05D012610 6.6e-09 64.7 144 35.4
Thhalv10026501m.g Eutrema salsugineum HOM05D004904 ORTHO05D012458 8.6e-09 64.3 151 29.8
AL2G29420 Arabidopsis lyrata HOM05D004904 ORTHO05D012993 1.1e-08 63.9 155 29.7
BraA07t30372Z Brassica rapa HOM05D004904 ORTHO05D012610 1.1e-08 63.9 145 34.5
Carub.0001s4013 Capsella rubella HOM05D004904 ORTHO05D012458 1.9e-08 63.2 149 32.9
Carub.0003s2589 Capsella rubella HOM05D004904 ORTHO05D012610 1.9e-08 63.2 149 33.6
C09p08660 Brassica napus HOM05D004904 ORTHO05D010762 2.5e-08 62.8 142 33.1
Thhalv10023047m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 4.3e-08 62.0 128 31.2
CARHR216110 Cardamine hirsuta HOM05D004904 ORTHO05D010762 7.3e-08 61.2 141 31.9
C06p30120 Brassica napus HOM05D004904 ORTHO05D012610 1.2e-07 60.5 132 35.6
Carub.0002s1683 Capsella rubella HOM05D004904 ORTHO05D012993 2.1e-07 59.7 131 32.1
Thhalv10005113m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 2.1e-07 59.7 131 31.3
BcaNung01392 Brassica carinata HOM05D004904 ORTHO05D010762 3.6e-07 58.9 125 33.6
Carub.0007s3223 Capsella rubella HOM05D004904 ORTHO05D010762 4.7e-07 58.5 127 31.5
A07p27280 Brassica napus HOM05D004904 ORTHO05D012610 1.0e-06 57.4 145 33.1
BraA07t30371Z Brassica rapa HOM05D004904 ORTHO05D012610 1.0e-06 57.4 145 33.1
C02p36240 Brassica napus HOM05D011693 ORTHO05D017562 1.8e-06 56.6 148 28.4
BolC2t09637H Brassica oleracea HOM05D011693 ORTHO05D017562 1.8e-06 56.6 148 28.4
Carub.0007s3224 Capsella rubella HOM05D004904 ORTHO05D010762 2.3e-06 56.2 127 30.7
Carub.0007s2940 Capsella rubella HOM05D004904 ORTHO05D010762 3.0e-06 55.8 140 30.7
Aa31LG3G3090 Aethionema arabicum HOM05D004904 ORTHO05D002833 6.8e-06 54.7 135 29.6
Thhalv10005700m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 8.9e-06 54.3 131 30.5


User provided reference genes

Program Settings