Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p61900 Brassica napus HOM05D000764 ORTHO05D004953 3.8e-63 244.6 116 100.0
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 2.8e-10 68.9 52 69.2
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 3.7e-10 68.6 48 75.0
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 4.8e-10 68.2 49 69.4
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 6.3e-10 67.8 56 64.3
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 8.3e-10 67.4 48 70.8
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 1.1e-09 67.0 36 86.1
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 2.4e-09 65.9 36 83.3
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 2.4e-09 65.9 55 60.0
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 2.4e-09 65.9 49 67.3
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 3.1e-09 65.5 50 70.0
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 3.1e-09 65.5 36 83.3
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 3.1e-09 65.5 51 66.7
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 4.1e-09 65.1 52 67.3
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 5.4e-09 64.7 52 61.5
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 7.0e-09 64.3 49 69.4
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 7.0e-09 64.3 36 83.3
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 7.0e-09 64.3 36 83.3
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 7.0e-09 64.3 62 59.7
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 9.1e-09 63.9 36 80.6
VMungo1080G0389 Vigna mungo HOM05D000764 ORTHO05D004953 9.1e-09 63.9 39 74.4
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 1.2e-08 63.5 36 83.3
CAN.G1237.21 Capsicum annuum HOM05D000764 ORTHO05D004953 1.2e-08 63.5 61 54.1
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 1.2e-08 63.5 51 66.7
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 1.2e-08 63.5 48 68.8
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 1.2e-08 63.5 60 60.0
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.6e-08 63.2 35 82.9
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 1.6e-08 63.2 53 67.9
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 2.0e-08 62.8 50 66.0
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 2.0e-08 62.8 55 58.2
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 2.0e-08 62.8 49 69.4
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 2.0e-08 62.8 36 80.6
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 2.0e-08 62.8 52 63.5
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 2.0e-08 62.8 51 62.7
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 2.0e-08 62.8 51 62.7
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 2.0e-08 62.8 51 64.7
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 2.7e-08 62.4 62 58.1
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 2.7e-08 62.4 49 63.3
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 3.5e-08 62.0 46 69.6
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 3.5e-08 62.0 46 67.4
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 3.5e-08 62.0 46 67.4
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 3.5e-08 62.0 46 67.4
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 3.5e-08 62.0 46 67.4
CAN.G1237.45 Capsicum annuum HOM05D000764 ORTHO05D004953 4.5e-08 61.6 56 62.5
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 4.5e-08 61.6 49 63.3
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 4.5e-08 61.6 36 77.8
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 4.5e-08 61.6 49 61.2
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 4.5e-08 61.6 36 75.0
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 5.9e-08 61.2 52 63.5
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 5.9e-08 61.2 47 72.3
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 5.9e-08 61.2 53 62.3
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 5.9e-08 61.2 36 80.6
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 5.9e-08 61.2 30 93.3
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 5.9e-08 61.2 36 77.8
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 5.9e-08 61.2 36 77.8
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 5.9e-08 61.2 49 61.2
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 5.9e-08 61.2 49 61.2
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 5.9e-08 61.2 49 61.2
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 5.9e-08 61.2 63 50.8
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 5.9e-08 61.2 36 77.8
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 5.9e-08 61.2 49 67.3
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 5.9e-08 61.2 49 67.3
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 7.7e-08 60.8 36 80.6
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 7.7e-08 60.8 36 77.8
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 1.3e-07 60.1 31 90.3
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 1.3e-07 60.1 49 67.3
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 1.3e-07 60.1 49 65.3
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 1.7e-07 59.7 36 77.8
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 1.7e-07 59.7 36 77.8
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 1.7e-07 59.7 30 90.0
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 1.7e-07 59.7 52 59.6
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 1.7e-07 59.7 36 75.0
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 2.3e-07 59.3 35 77.1
CAN.G610.44 Capsicum annuum HOM05D000764 ORTHO05D004953 2.9e-07 58.9 52 61.5
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 5.0e-07 58.2 48 64.6
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 6.6e-07 57.8 48 62.5
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 6.6e-07 57.8 34 76.5
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 6.6e-07 57.8 35 74.3
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 6.6e-07 57.8 52 55.8
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 6.6e-07 57.8 36 75.0
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 1.5e-06 56.6 30 86.7
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 1.9e-06 56.2 49 59.2
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 3.3e-06 55.5 36 72.2
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 7.2e-06 54.3 62 48.4
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 9.5e-06 53.9 36 63.9
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 9.5e-06 53.9 36 63.9


User provided reference genes

Program Settings