Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p61860 Brassica napus HOM05D003167 ORTHO05D033269 6.9e-39 163.3 72 100.0
BcaNung00709 Brassica carinata HOM05D003167 ORTHO05D003929 5.8e-22 107.1 48 97.9
BcaNung06144 Brassica carinata HOM05D003167 ORTHO05D003929 1.2e-19 99.4 48 89.6
Aa31LG1G9100 Aethionema arabicum HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
AL1G13510 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
AT1G03910 Arabidopsis thaliana HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
A10p02430 Brassica napus HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
C05p02250 Brassica napus HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
BolC5t29003H Brassica oleracea HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
Carub.0001s0306 Capsella rubella HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
CARHR003250 Cardamine hirsuta HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
Thhalv10006994m.g Eutrema salsugineum HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
Sp1g02770 Schrenkiella parvula HOM05D003167 ORTHO05D003929 1.6e-19 99.0 48 87.5
Ca_08942_v3 Cicer arietinum L. HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Glyma.19G188800 Glycine max HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Lj1g0005916 Lotus japonicus HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Lalb_Chr21g0315291 Lupinus albus HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Lalb_Chr25g0288761 Lupinus albus HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
MD14G1096200 Malus domestica HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Medtr1g061860 Medicago truncatula HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Medtr7g102700 Medicago truncatula HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Phvul.001G184000 Phaseolus vulgaris HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Psat3g037760 Pisum sativum HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Psat6g078080 Pisum sativum HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
TPR.G27088 Trifolium pratense HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
TPR.G31678 Trifolium pratense HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
VMungo1383G0302 Vigna mungo HOM05D003167 ORTHO05D003929 3.5e-19 97.8 48 85.4
Atru.chr8.1695 Acer truncatum HOM05D003167 ORTHO05D003929 6.1e-19 97.1 48 85.4
Ah.15g091340 Amaranthus hybridus HOM05D003167 ORTHO05D003929 6.1e-19 97.1 48 85.4
EL10Ac7g16722 Beta vulgaris HOM05D003167 ORTHO05D003929 6.1e-19 97.1 48 85.4
AUR62040188 Chenopodium quinoa HOM05D003167 ORTHO05D003929 6.1e-19 97.1 48 85.4
AUR62042696 Chenopodium quinoa HOM05D003167 ORTHO05D003929 6.1e-19 97.1 48 85.4
Hund04098 Selenicereus undatus HOM05D003167 ORTHO05D003929 6.1e-19 97.1 48 85.4
BcaC07g42222 Brassica carinata HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
A09p68130 Brassica napus HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
C08p52570 Brassica napus HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
BolC8t52784H Brassica oleracea HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
BraA09t42148Z Brassica rapa HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
Cfa016494 Carpinus fangiana HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
Cc10_g12700 Coffea canephora HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
THA.LOC104816364 Tarenaya hassleriana HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
Zm00001eb061170 Zea mays HOM05D003167 ORTHO05D003929 7.9e-19 96.7 48 85.4
Glyma.03G188600 Glycine max HOM05D003167 ORTHO05D003929 1.3e-18 95.9 48 83.3
ATR0724G050 Amborella trichopoda HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
arahy.Tifrunner.gnm1.ann1.P92TZX Arachis hypogaea HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
arahy.Tifrunner.gnm1.ann1.WY8M22 Arachis hypogaea HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
MSTRG.21603 Avicennia marina HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
CSS0014862 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
CSS0043785 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
CANSAT80G1311 Cannabis sativa HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Cpa.g.sc5.120 Carica papaya HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
ClCG10G019590 Citrullus lanatus HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
COL.COLO4_22264 Corchorus olitorius HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Haze_19497 Corylus avellana HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
MELO3C009413.2 Cucumis melo HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
CsaV3_3G036590 Cucumis sativus L. HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Duzib093G1992 Durio zibethinus HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
ECA232G4074 Erigeron canadensis HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
ECA238G2918 Erigeron canadensis HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Migut.G00710 Erythranthe guttata HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Eucgr.K02416 Eucalyptus grandis HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
FvH4_6g17312 Fragaria vesca HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
FAN02G2003 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
FAN05G3544 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
FAN05G3981 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
FAN14G2907 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Gohir.A04G067800 Gossypium hirsutum HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Gohir.D04G106400 Gossypium hirsutum HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Gorai.009G410400 Gossypium raimondii HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
HanXRQChr11g0325191 Helianthus annuus HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Hma1.2p1_0564F.1_g179130 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Lsat_1_v5_gn_2_23140 Lactuca sativa HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Lj3C1008T14 Lonicera japonica HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Manes.08G017200 Manihot esculenta HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Mapoly0001s0156 Marchantia polymorpha HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Pp3c27_420 Physcomitrium patens HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Prupe.7G122300 Prunus persica HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
PGR142G4079 Punica granatum HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
RcHm_v2.0_Chr3g0471451 Rosa chinensis HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
SalBow8G1467 Salvia bowleyana HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
SalBow8G3947 Salvia bowleyana HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Sed0027110 Sechium edule HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
SMO169G0108 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
SGA_v2.0_scaffold312G48279 Striga asiatica HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Thecc.05G076300 Theobroma cacao HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
TAR623G0013 Trochodendron aralioides HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
vmacro07353 Vaccinium macrocarpon HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
VMungo0720G2588 Vigna mungo HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
GSVIVG01033725001 Vitis vinifera HOM05D003167 ORTHO05D003929 1.8e-18 95.5 48 83.3
Peaxi162Scf00732g00028 Petunia axillaris HOM05D003167 ORTHO05D003929 3.0e-18 94.7 48 83.3
Aqoxy1G01021 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
CDE04G1328 Ceratophyllum demersum HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
Ciclev10011207m.g Citrus clementina HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
DCAR_020795 Daucus carota HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
Dinv35839 Davidia involucrata HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
Nitab4.5_0002027g0020 Nicotiana tabacum HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
PSO339G0841 Papaver somniferum HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
Peaxi162Scf01089g10011 Petunia axillaris HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
Potri.006G118700 Populus trichocarpa HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
Sabra06G0093300 Salix brachista HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
SEGI_34935 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
Solyc10g085410.3 Solanum lycopersicum HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
Sopen10g034860 Solanum pennellii HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
PGSC0003DMG400040194 Solanum tuberosum HOM05D003167 ORTHO05D003929 3.9e-18 94.4 48 81.2
FAN05G5009 Fragaria x ananassa HOM05D003167 ORTHO05D003929 5.1e-18 94.0 48 81.2
QL07p041296 Quercus lobata HOM05D003167 ORTHO05D003929 5.1e-18 94.0 47 80.9
TAR636G1269 Trochodendron aralioides HOM05D003167 ORTHO05D003929 5.1e-18 94.0 48 81.2
Aqoxy1G01022 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 6.7e-18 93.6 48 83.3
CiPaw.10G002600 Carya illinoinensis HOM05D003167 ORTHO05D003929 6.7e-18 93.6 48 81.2
CAN.G738.3 Capsicum annuum HOM05D003167 ORTHO05D003929 1.9e-17 92.0 48 79.2
Hma1.2p1_2996F.1_g331470 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 1.9e-17 92.0 47 83.0
Oeu027192.1 Olea europaea HOM05D003167 ORTHO05D003929 2.5e-17 91.7 48 81.2
SHI27742 Sapria himalayana HOM05D003167 ORTHO05D003929 2.5e-17 91.7 48 79.2
FAN23G0551 Fragaria x ananassa HOM05D003167 ORTHO05D003929 4.3e-17 90.9 48 79.2
FAN26G0867 Fragaria x ananassa HOM05D003167 ORTHO05D003929 4.3e-17 90.9 48 79.2
FAN26G2184 Fragaria x ananassa HOM05D003167 ORTHO05D003929 4.3e-17 90.9 48 79.2
FvH4_1g06450 Fragaria vesca HOM05D003167 ORTHO05D003929 7.4e-17 90.1 47 80.9
FAN19G3088 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.3e-16 89.4 48 77.1
Thecc.06G013600 Theobroma cacao HOM05D003167 ORTHO05D003929 1.3e-16 89.4 48 77.1
Carub.0004s1866 Capsella rubella HOM05D003167 ORTHO05D003929 1.6e-16 89.0 48 81.2
Cre09.g398650 Chlamydomonas reinhardtii HOM05D003167 ORTHO05D003929 1.6e-16 89.0 48 75.0
Lj8P306T56 Lonicera japonica HOM05D003167 ORTHO05D003929 1.6e-16 89.0 47 78.7
PSO210G0575 Papaver somniferum HOM05D003167 ORTHO05D003929 2.8e-16 88.2 46 80.4
Lj1P1240T21 Lonicera japonica HOM05D003167 ORTHO05D003929 4.8e-16 87.4 48 79.2
Eucgr.D02277 Eucalyptus grandis HOM05D003167 ORTHO05D003929 6.3e-16 87.0 48 77.1
Hma1.2p1_0033F.1_g020920 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 1.1e-15 86.3 47 78.7
FAN28G1035 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-15 85.5 46 76.1
RcHm_v2.0_Chr2g0092191 Rosa chinensis HOM05D003167 ORTHO05D003929 1.8e-15 85.5 48 77.1
Aqoxy3G01485 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 2.6e-14 81.6 49 71.4
SMO364G0524 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 2.6e-14 81.6 48 75.0
Cc07_g17880 Coffea canephora HOM05D003167 ORTHO05D003929 3.4e-14 81.3 48 72.9
QL10p008780 Quercus lobata HOM05D003167 ORTHO05D033269 4.5e-14 80.9 47 72.3
CARHR131270 Cardamine hirsuta HOM05D003167 ORTHO05D003929 5.9e-14 80.5 48 70.8
AUR62018820 Chenopodium quinoa HOM05D003167 ORTHO05D003929 5.9e-14 80.5 48 72.9
AUR62022073 Chenopodium quinoa HOM05D003167 ORTHO05D003929 5.9e-14 80.5 48 75.0
AUR62022074 Chenopodium quinoa HOM05D003167 ORTHO05D003929 5.9e-14 80.5 48 75.0
Nitab4.5_0007768g0040 Nicotiana tabacum HOM05D003167 ORTHO05D003929 1.0e-13 79.7 43 69.8
Thecc.08G192100 Theobroma cacao HOM05D003167 ORTHO05D003929 1.7e-13 79.0 48 72.9
Potri.001G242900 Populus trichocarpa HOM05D003167 ORTHO05D003929 2.9e-13 78.2 47 68.1
Cc04_g07780 Coffea canephora HOM05D003167 ORTHO05D003929 3.8e-13 77.8 43 72.1
AL4G33010 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 6.5e-13 77.0 48 77.1
FAN23G2272 Fragaria x ananassa HOM05D003167 ORTHO05D003929 6.5e-13 77.0 45 71.1
QL10p005646 Quercus lobata HOM05D003167 ORTHO05D003929 6.5e-13 77.0 47 70.2
COL.COLO4_36480 Corchorus olitorius HOM05D003167 ORTHO05D003929 8.5e-13 76.6 48 72.9
SEGI_27063 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 1.1e-12 76.3 41 78.0
AUR62007182 Chenopodium quinoa HOM05D003167 ORTHO05D003929 1.4e-12 75.9 48 66.7
AUR62007183 Chenopodium quinoa HOM05D003167 ORTHO05D003929 1.4e-12 75.9 48 66.7
Atru.chr10.2404 Acer truncatum HOM05D003167 ORTHO05D003929 1.9e-12 75.5 45 73.3
Aqoxy3G01613 Aquilegia oxysepala HOM05D003167 ORTHO05D000007 1.9e-12 75.5 45 68.9
FAN19G0600 Fragaria x ananassa HOM05D003167 ORTHO05D003929 5.1e-10 67.4 32 81.2
Cfa022090 Carpinus fangiana HOM05D003167 ORTHO05D003929 4.3e-09 64.3 44 59.1
BolC7t46608H Brassica oleracea HOM05D003167 ORTHO05D033269 8.2e-08 60.1 24 100.0
HPP92_017793 Vanilla planifolia HOM05D003167 ORTHO05D003929 1.4e-07 59.3 28 82.1
PRCOL_00002534 Prasinoderma coloniale HOM05D003167 ORTHO05D003929 1.2e-06 56.2 48 54.2


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