Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p61450 Brassica napus HOM05D004095 ORTHO05D003197 2.7e-144 515.8 353 100.0
BcaNung05051 Brassica carinata HOM05D004095 ORTHO05D003197 6.8e-140 501.1 353 92.9
BolC7t46570H Brassica oleracea HOM05D004095 ORTHO05D003197 8.6e-135 484.2 365 94.2
BraA03t15466Z Brassica rapa HOM05D004095 ORTHO05D003197 7.8e-120 434.5 368 75.0
A03p63990 Brassica napus HOM05D004095 ORTHO05D003197 1.3e-117 427.2 365 74.5
CARHR244340 Cardamine hirsuta HOM05D004095 ORTHO05D003197 1.5e-78 297.4 369 56.1
AL7G15100 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 5.5e-73 278.9 368 59.2
AT4G35940 Arabidopsis thaliana HOM05D004095 ORTHO05D003197 3.0e-71 273.1 385 57.9
C01p03060 Brassica napus HOM05D004095 ORTHO05D003197 5.7e-70 268.9 362 58.3
Sp7g33720 Schrenkiella parvula HOM05D004095 ORTHO05D003197 1.8e-68 263.8 381 52.8
Carub.0007s0428 Capsella rubella HOM05D004095 ORTHO05D003197 3.1e-68 263.1 370 54.9
Thhalv10027062m.g Eutrema salsugineum HOM05D004095 ORTHO05D003197 9.1e-68 261.5 292 57.9
BcaNung00778 Brassica carinata HOM05D004095 ORTHO05D003197 1.0e-66 258.1 365 58.6
BolC1t00292H Brassica oleracea HOM05D004095 ORTHO05D003197 1.7e-66 257.3 362 58.3
BraA01t00262Z Brassica rapa HOM05D004095 ORTHO05D003197 8.0e-64 248.4 365 57.5
A01p02760 Brassica napus HOM05D004095 ORTHO05D003197 2.8e-61 240.0 363 59.0
Aa31LG6G12890 Aethionema arabicum HOM05D004095 ORTHO05D003197 3.4e-46 189.9 383 49.1
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 9.8e-38 161.8 382 40.3
THA.LOC104807504 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 2.1e-32 144.1 382 36.9
Thhalv10022767m.g Eutrema salsugineum HOM05D004095 ORTHO05D003197 1.8e-31 141.0 372 38.7
BcaB07g31703 Brassica carinata HOM05D004095 ORTHO05D003197 2.3e-31 140.6 362 39.2
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 9.2e-28 128.6 366 34.7
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 9.2e-28 128.6 367 36.5
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 2.3e-26 124.0 366 30.9
Carub.0003s3193 Capsella rubella HOM05D004095 ORTHO05D003197 5.0e-26 122.9 390 34.1
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 6.6e-26 122.5 364 37.4
AT2G17787 Arabidopsis thaliana HOM05D004095 ORTHO05D003197 1.1e-25 121.7 389 32.4
BcaC06g36322 Brassica carinata HOM05D004095 ORTHO05D003197 1.1e-25 121.7 361 34.3
C07p05400 Brassica napus HOM05D004095 ORTHO05D003197 1.5e-25 121.3 365 31.5
CARHR108180 Cardamine hirsuta HOM05D004095 ORTHO05D003197 1.5e-25 121.3 360 34.2
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 1.5e-25 121.3 366 35.5
A07p03170 Brassica napus HOM05D004095 ORTHO05D003197 5.6e-25 119.4 366 33.1
BolC7t40940H Brassica oleracea HOM05D004095 ORTHO05D003197 9.5e-25 118.6 365 31.2
BraA07t28113Z Brassica rapa HOM05D004095 ORTHO05D003197 1.6e-24 117.9 367 32.2
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.8e-24 117.1 364 36.5
BraA09t36805Z Brassica rapa HOM05D004095 ORTHO05D003197 6.2e-24 115.9 366 32.8
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 6.2e-24 115.9 368 35.6
A09p11580 Brassica napus HOM05D004095 ORTHO05D003197 1.1e-23 115.2 371 29.6
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 1.2e-22 111.7 368 34.8
AL3G50810 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 4.4e-22 109.8 390 35.1
C09p13630 Brassica napus HOM05D004095 ORTHO05D003197 1.3e-21 108.2 360 33.9
BcaC04g22942 Brassica carinata HOM05D004095 ORTHO05D003197 2.4e-20 104.0 360 33.6
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 3.3e-17 93.6 404 30.7
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.4e-15 88.2 372 38.2
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 8.4e-13 79.0 364 31.6
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 3.2e-12 77.0 236 42.4
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 9.2e-12 75.5 369 30.6
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 2.1e-11 74.3 460 34.8
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.0e-10 72.0 176 29.0
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.0e-10 70.5 268 29.1
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 3.0e-10 70.5 385 31.9
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 3.9e-10 70.1 360 30.6
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 3.9e-10 70.1 198 40.4
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 5.1e-10 69.7 224 37.1
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 5.1e-10 69.7 358 30.2
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 5.1e-10 69.7 356 29.5
Gohir.D12G193466 Gossypium hirsutum HOM05D004095 ORTHO05D003197 8.7e-10 68.9 228 25.4
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 8.7e-10 68.9 356 29.5
Ciclev10025767m.g Citrus clementina HOM05D004095 ORTHO05D003197 1.1e-09 68.6 335 26.6
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 3.3e-09 67.0 374 31.0
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 3.3e-09 67.0 373 32.4
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 5.6e-09 66.2 379 31.7
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 4.7e-08 63.2 372 30.6
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 2.4e-07 60.8 378 30.4
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 2.4e-07 60.8 365 31.2
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 3.1e-07 60.5 365 28.5
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 4.0e-07 60.1 368 27.2
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 5.2e-07 59.7 373 28.2
FvH4_1g11400 Fragaria vesca HOM05D024588 ORTHO05D003197 5.2e-07 59.7 224 42.0
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 9.0e-07 58.9 366 27.9
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 1.2e-06 58.5 367 28.6
RcHm_v2.0_Chr2g0098961 Rosa chinensis HOM05D024588 ORTHO05D003197 1.2e-06 58.5 190 40.5
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 1.2e-06 58.5 202 39.6
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 2.0e-06 57.8 362 29.3
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 9.9e-06 55.5 377 30.2


User provided reference genes

Program Settings