Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p61110 Brassica napus HOM05D005114 ORTHO05D021810 3.6e-46 188.0 99 100.0
BcaNung02389 Brassica carinata HOM05D005114 ORTHO05D021810 6.8e-45 183.7 99 98.0
BcaNung06456 Brassica carinata HOM05D005114 ORTHO05D021810 6.8e-29 130.6 99 77.8
AL7G15830 Arabidopsis lyrata HOM05D005114 ORTHO05D006301 2.9e-19 98.6 91 63.7
AT4G35320 Arabidopsis thaliana HOM05D005114 ORTHO05D006301 2.9e-19 98.6 91 63.7
Carub.0007s0497 Capsella rubella HOM05D005114 ORTHO05D006301 3.7e-19 98.2 91 64.8
CARHR243650 Cardamine hirsuta HOM05D005114 ORTHO05D006301 3.2e-18 95.1 91 64.8
Sp7g33120 Schrenkiella parvula HOM05D005114 ORTHO05D006301 7.8e-17 90.5 91 62.6
BolC1t00348H Brassica oleracea HOM05D005114 ORTHO05D006301 3.0e-16 88.6 91 58.2
Aa31LG2G14950 Aethionema arabicum HOM05D005114 ORTHO05D006301 3.9e-16 88.2 94 60.6
BcaNung00605 Brassica carinata HOM05D005114 ORTHO05D006301 3.9e-16 88.2 91 57.1
C01p03580 Brassica napus HOM05D005114 ORTHO05D006301 3.9e-16 88.2 91 57.1
A01p03230 Brassica napus HOM05D005114 ORTHO05D006301 1.9e-15 85.9 91 57.1
BraA01t00308Z Brassica rapa HOM05D005114 ORTHO05D006301 1.9e-15 85.9 91 57.1
Thhalv10026488m.g Eutrema salsugineum HOM05D005114 ORTHO05D006301 4.3e-15 84.7 94 58.5
BcaC06g36254 Brassica carinata HOM05D005114 ORTHO05D006301 4.4e-12 74.7 91 56.0
A07p03740 Brassica napus HOM05D005114 ORTHO05D006301 4.4e-12 74.7 91 56.0
C07p05980 Brassica napus HOM05D005114 ORTHO05D006301 4.4e-12 74.7 91 56.0
BolC7t41007H Brassica oleracea HOM05D005114 ORTHO05D006301 4.4e-12 74.7 91 56.0
Carub.0003s3126 Capsella rubella HOM05D005114 ORTHO05D006301 2.2e-11 72.4 88 53.4
BraA07t28162Z Brassica rapa HOM05D005114 ORTHO05D006301 2.9e-11 72.0 91 54.9
BcaB03g16485 Brassica carinata HOM05D005114 ORTHO05D006301 4.9e-11 71.2 90 55.6
THA.LOC104819696 Tarenaya hassleriana HOM05D005114 ORTHO05D006301 9.2e-10 67.0 92 53.3
Thhalv10023149m.g Eutrema salsugineum HOM05D005114 ORTHO05D006301 1.6e-09 66.2 96 51.0
AL3G50180 Arabidopsis lyrata HOM05D005114 ORTHO05D006301 6.0e-09 64.3 90 51.1
AT2G17300 Arabidopsis thaliana HOM05D005114 ORTHO05D006301 6.0e-09 64.3 90 51.1
BolC7t46535H Brassica oleracea HOM05D034566 ORTHO05D021810 1.3e-08 63.2 34 97.1
THA.LOC104807409 Tarenaya hassleriana HOM05D005114 ORTHO05D006301 1.7e-08 62.8 89 52.8
Rhsim05G0044800 Rhododendron simsii HOM05D005114 ORTHO05D006301 6.6e-08 60.8 103 43.7
CARHR107410 Cardamine hirsuta HOM05D005114 ORTHO05D006301 2.5e-07 58.9 89 47.2
Glyma.02G311900 Glycine max HOM05D005114 ORTHO05D006301 1.2e-06 56.6 89 41.6
Sabra04G0139700 Salix brachista HOM05D005114 ORTHO05D006301 1.2e-06 56.6 93 45.2
Sp3g30650 Schrenkiella parvula HOM05D005114 ORTHO05D006301 1.2e-06 56.6 84 51.2
SalBow5G2991 Salvia bowleyana HOM05D005114 ORTHO05D006301 2.8e-06 55.5 91 42.9
SalBow5G4655 Salvia bowleyana HOM05D005114 ORTHO05D006301 2.8e-06 55.5 91 42.9


User provided reference genes

Program Settings