Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 4.1e-65 251.1 118 100.0
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 2.0e-64 248.8 118 99.2
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 2.0e-64 248.8 118 99.2
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 2.0e-64 248.8 118 99.2
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 2.0e-64 248.8 118 99.2
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 98.3
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 98.3
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 1.3e-63 246.1 118 98.3
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 1.7e-63 245.7 118 97.5
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 3.8e-63 244.6 118 97.5
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 3.8e-63 244.6 118 96.6
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 5.0e-63 244.2 118 96.6
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 5.0e-63 244.2 118 96.6
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 5.0e-63 244.2 118 96.6
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 5.0e-63 244.2 118 96.6
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 5.0e-63 244.2 118 96.6
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 9.5e-62 240.0 117 96.6
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 9.5e-62 240.0 118 95.8
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 2.1e-61 238.8 118 94.9
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 2.6e-59 231.9 118 89.8
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 1.7e-58 229.2 153 75.8
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 7.0e-57 223.8 118 87.3
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 3.0e-55 218.4 110 91.8
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 4.7e-53 211.1 116 83.6
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 4.7e-53 211.1 116 82.8
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 4.7e-53 211.1 116 82.8
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 6.2e-53 210.7 116 83.6
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 6.2e-53 210.7 116 83.6
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 6.2e-53 210.7 116 82.8
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 1.4e-52 209.5 116 82.8
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 1.4e-52 209.5 116 82.8
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.3e-52 208.8 116 81.9
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 4.0e-52 208.0 116 81.9
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 5.2e-52 207.6 116 82.8
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 6.8e-52 207.2 115 82.6
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 8.9e-52 206.8 116 81.9
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 8.9e-52 206.8 116 81.9
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 2.0e-51 205.7 116 81.9
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 2.6e-51 205.3 116 81.9
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 2.6e-51 205.3 116 81.0
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 2.6e-51 205.3 116 81.0
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 2.6e-51 205.3 112 82.1
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 5.8e-51 204.1 116 80.2
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 7.5e-51 203.8 114 81.6
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 7.5e-51 203.8 115 81.7
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 7.5e-51 203.8 113 80.5
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 9.8e-51 203.4 116 81.0
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 1.3e-50 203.0 112 82.1
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 1.3e-50 203.0 116 79.3
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 1.7e-50 202.6 114 81.6
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 2.2e-50 202.2 116 79.3
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 2.2e-50 202.2 116 80.2
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 6.4e-50 200.7 112 83.0
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 80.2
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 1.1e-49 199.9 112 83.0
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 1.1e-49 199.9 116 79.3
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.4e-49 199.5 113 79.6
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 1.4e-49 199.5 115 76.5
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 1.9e-49 199.1 113 79.6
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 2.4e-49 198.7 112 80.4
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 3.2e-49 198.4 117 77.8
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 9.2e-49 196.8 113 77.9
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 1.2e-48 196.4 113 77.9
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 1.2e-48 196.4 116 77.6
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 1.2e-48 196.4 112 78.6
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 1.2e-48 196.4 113 78.8
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 1.2e-48 196.4 111 78.4
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 1.6e-48 196.1 111 80.2
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 2.0e-48 195.7 111 79.3
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 2.0e-48 195.7 112 77.7
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.7e-48 195.3 113 77.0
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 2.7e-48 195.3 116 76.7
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 2.7e-48 195.3 112 75.9
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 2.7e-48 195.3 112 75.9
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 3.5e-48 194.9 115 76.5
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 3.5e-48 194.9 112 79.5
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 4.6e-48 194.5 116 78.4
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 4.6e-48 194.5 115 76.5
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 6.0e-48 194.1 113 76.1
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 6.0e-48 194.1 118 77.1
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 6.0e-48 194.1 116 75.9
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 7.8e-48 193.7 113 77.0
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 7.8e-48 193.7 115 77.4
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 1.0e-47 193.4 115 74.8
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.0e-47 193.4 115 77.4
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 1.3e-47 193.0 113 77.9
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 2.3e-47 192.2 112 76.8
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 2.3e-47 192.2 113 77.0
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 3.9e-47 191.4 112 75.9
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 5.0e-47 191.0 116 76.7
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 5.0e-47 191.0 116 74.1
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 8.6e-47 190.3 112 71.4
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 1.1e-46 189.9 108 79.6
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 1.5e-46 189.5 108 78.7
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 1.5e-46 189.5 115 73.0
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 1.9e-46 189.1 113 75.2
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 4.3e-46 188.0 116 76.7
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 4.3e-46 188.0 115 73.0
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 7.3e-46 187.2 111 75.7
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 9.5e-46 186.8 115 74.8
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 1.6e-45 186.0 112 77.7
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 2.1e-45 185.7 137 65.7
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 2.8e-45 185.3 113 70.8
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 3.6e-45 184.9 111 74.8
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 3.1e-44 181.8 118 77.1
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 3.4e-43 178.3 104 73.1
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 4.4e-43 177.9 104 73.1
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 9.8e-43 176.8 103 74.8
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.7e-42 176.0 104 78.8
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 2.2e-42 175.6 116 72.4
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.9e-42 175.3 105 76.2
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 1.1e-41 173.3 104 76.0
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 1.1e-41 173.3 102 77.5
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 2.4e-41 172.2 109 72.5
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 3.2e-41 171.8 105 70.5
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 4.1e-41 171.4 101 73.3
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 1.7e-39 166.0 180 50.0
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 2.3e-39 165.6 96 80.2
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 3.0e-39 165.2 121 65.3
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 8.6e-39 163.7 101 72.3
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 1.8e-36 156.0 91 80.2
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.7e-34 149.4 115 63.5
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 4.1e-33 144.8 112 58.9
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 5.4e-33 144.4 115 62.6
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 7.8e-32 140.6 113 54.0
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 1.1e-30 136.7 111 55.0
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 7.3e-30 134.0 85 70.6
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 3.1e-28 128.6 109 52.3
BolC3t20846H Brassica oleracea HOM05D005368 ORTHO05D006417 5.4e-25 117.9 83 75.9
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-25 117.1 114 50.0
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 1.0e-23 113.6 103 52.4
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 2.3e-23 112.5 58 79.3
Gohir.A13G090800 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.9e-23 111.7 85 64.7
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 6.6e-23 110.9 99 53.5
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 4.3e-22 108.2 60 75.0
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 7.3e-22 107.5 57 78.9
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 1.3e-21 106.7 91 56.0
BcaNung04613 Brassica carinata HOM05D005368 ORTHO05D006417 1.4e-20 103.2 55 87.3
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 4.0e-20 101.7 113 48.7
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 5.8e-19 97.8 58 72.4
BcaNung02377 Brassica carinata HOM05D005368 ORTHO05D006417 2.2e-18 95.9 47 91.5
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 8.4e-18 94.0 152 38.2
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 1.1e-17 93.6 96 46.9
Migut.B00174 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.6e-16 89.7 55 76.4
HanXRQChr17g0544121 Helianthus annuus HOM05D005368 ORTHO05D006417 4.6e-16 88.2 58 77.6
MD05G1026100 Malus domestica HOM05D005333 ORTHO05D005776 2.5e-14 82.4 79 55.7
Cre11.g467668 Chlamydomonas reinhardtii HOM05D005368 ORTHO05D006417 1.4e-09 66.6 99 35.4
VMungo0540G1094 Vigna mungo HOM05D003030 ORTHO05D006417 5.6e-06 54.7 82 42.7


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