Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p60660 Brassica napus HOM05D006691 ORTHO05D007620 4.6e-39 164.1 83 100.0
BolC7t46496H Brassica oleracea HOM05D006691 ORTHO05D007620 4.6e-39 164.1 83 100.0
A03p63030 Brassica napus HOM05D006691 ORTHO05D007620 3.9e-38 161.0 83 97.6
BraA03t15377Z Brassica rapa HOM05D006691 ORTHO05D007620 3.9e-38 161.0 83 97.6
BcaB03g11823 Brassica carinata HOM05D006691 ORTHO05D007620 5.1e-30 134.0 83 83.1
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 9.7e-29 129.8 83 81.9
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 2.8e-28 128.3 83 77.1
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 4.8e-28 127.5 83 80.7
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 5.3e-27 124.0 83 75.9
BcaC01g00889 Brassica carinata HOM05D006691 ORTHO05D007620 7.0e-27 123.6 83 80.7
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 1.2e-26 122.9 83 80.7
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 1.2e-26 122.9 83 80.7
BraA08t33636Z Brassica rapa HOM05D006691 ORTHO05D007620 2.0e-26 122.1 83 79.5
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 2.6e-26 121.7 83 78.3
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 2.6e-26 121.7 83 79.5
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 2.6e-26 121.7 83 73.5
BolC3t20851H Brassica oleracea HOM05D006691 ORTHO05D007620 7.7e-26 120.2 85 76.5
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 3.1e-19 98.2 63 73.0
C03p85630 Brassica napus HOM05D006691 ORTHO05D007620 7.0e-19 97.1 55 83.6
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 3.5e-18 94.7 77 55.8
A08p16710 Brassica napus HOM05D006691 ORTHO05D007620 4.5e-18 94.4 55 81.8
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 5.9e-18 94.0 78 53.8
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 7.7e-18 93.6 79 58.2
BolC1t00407H Brassica oleracea HOM05D006691 ORTHO05D007620 9.4e-16 86.7 87 62.1
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 2.6e-13 78.6 84 48.8
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 3.7e-12 74.7 84 48.8
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 4.8e-12 74.3 84 48.8
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 2.4e-11 72.0 91 42.9
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 4.1e-11 71.2 88 46.6
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 4.1e-11 71.2 85 48.2
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 5.4e-11 70.9 89 44.9
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 2.0e-10 68.9 94 44.7
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 3.5e-10 68.2 84 47.6
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 4.5e-10 67.8 94 43.6
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 5.0e-09 64.3 92 40.2
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 6.5e-09 63.9 91 40.7
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 6.5e-09 63.9 87 40.2
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 6.5e-09 63.9 87 39.1
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 8.5e-09 63.5 94 40.4
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 1.1e-08 63.2 96 42.7
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 1.1e-08 63.2 93 39.8
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 1.9e-08 62.4 91 38.5
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 2.5e-08 62.0 93 37.6
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 3.2e-08 61.6 88 40.9
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 3.2e-08 61.6 87 41.4
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 5.5e-08 60.8 88 39.8
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 7.2e-08 60.5 87 41.4
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 9.4e-08 60.1 81 40.7
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 9.4e-08 60.1 94 40.4
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 1.6e-07 59.3 88 42.0
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 2.1e-07 58.9 90 43.3
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 4.7e-07 57.8 85 37.6
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 4.7e-07 57.8 90 34.4
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 4.7e-07 57.8 77 41.6
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 4.7e-07 57.8 88 42.0
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 6.1e-07 57.4 80 42.5
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 6.1e-07 57.4 80 42.5
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 8.0e-07 57.0 81 39.5
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 8.0e-07 57.0 84 34.5
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.0e-06 56.6 90 38.9
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.0e-06 56.6 90 38.9
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 1.0e-06 56.6 85 35.3
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 1.4e-06 56.2 90 34.4
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 1.4e-06 56.2 87 37.9
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 1.8e-06 55.8 83 38.6
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 1.8e-06 55.8 93 38.7
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 1.8e-06 55.8 80 38.8
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 2.3e-06 55.5 90 36.7
AT4G34600 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 3.0e-06 55.1 45 71.1
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 3.0e-06 55.1 86 36.0
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.0e-06 55.1 93 36.6
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 4.0e-06 54.7 81 39.5
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 4.0e-06 54.7 88 35.2
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 5.2e-06 54.3 85 37.6
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 5.2e-06 54.3 91 37.4
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.2e-06 54.3 81 39.5
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 5.2e-06 54.3 86 40.7
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 6.8e-06 53.9 81 39.5
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 6.8e-06 53.9 80 40.0
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 6.8e-06 53.9 80 41.2


User provided reference genes

Program Settings