Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p60300 Brassica napus HOM05D014889 ORTHO05D000013 2.7e-58 228.4 111 100.0
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 2.4e-38 162.2 79 94.9
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 1.2e-37 159.8 79 93.7
BolC2t08170H Brassica oleracea HOM05D014889 ORTHO05D000013 3.1e-30 135.2 110 60.0
A02p12550 Brassica napus HOM05D006289 ORTHO05D000013 1.1e-14 83.6 78 50.0
BraA10t43451Z Brassica rapa HOM05D006289 ORTHO05D000013 1.1e-14 83.6 78 50.0
A06p16010 Brassica napus HOM05D000017 ORTHO05D000013 2.4e-14 82.4 94 42.6
A09p34770 Brassica napus HOM05D000017 ORTHO05D000013 5.3e-14 81.3 102 39.2
C07p09740 Brassica napus HOM05D000017 ORTHO05D000013 5.3e-14 81.3 101 37.6
BraA07t28815Z Brassica rapa HOM05D000017 ORTHO05D000013 6.9e-14 80.9 102 40.2
A09p28370 Brassica napus HOM05D000017 ORTHO05D000013 1.2e-13 80.1 79 46.8
BraA05t21308Z Brassica rapa HOM05D006289 ORTHO05D000013 1.2e-13 80.1 78 48.7
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 2.0e-13 79.3 77 48.1
A10p07440 Brassica napus HOM05D006289 ORTHO05D000013 3.4e-13 78.6 102 39.2
A02p37010 Brassica napus HOM05D000017 ORTHO05D000013 4.5e-13 78.2 103 39.8
BraA02t08688Z Brassica rapa HOM05D000017 ORTHO05D000013 4.5e-13 78.2 103 39.8
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 7.6e-13 77.4 102 38.2
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 2.9e-12 75.5 102 38.2
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 2.9e-12 75.5 102 38.2
Sp4g09850 Schrenkiella parvula HOM05D006289 ORTHO05D000013 2.9e-12 75.5 72 47.2
A05p28240 Brassica napus HOM05D006289 ORTHO05D000013 3.8e-12 75.1 78 47.4
BolC7t43637H Brassica oleracea HOM05D000017 ORTHO05D000013 3.8e-12 75.1 102 36.3
BraA05t21705Z Brassica rapa HOM05D006289 ORTHO05D000013 3.8e-12 75.1 78 47.4
A04p22200 Brassica napus HOM05D000017 ORTHO05D000013 1.9e-11 72.8 89 41.6
BraA08t34503Z Brassica rapa HOM05D000017 ORTHO05D000013 1.9e-11 72.8 98 35.7
C06p10560 Brassica napus HOM05D000017 ORTHO05D000013 7.2e-11 70.9 77 42.9
BolC2t07875H Brassica oleracea HOM05D034814 ORTHO05D000013 7.2e-11 70.9 77 45.5
BolC6t36137H Brassica oleracea HOM05D000017 ORTHO05D000013 7.2e-11 70.9 77 42.9
BraA05t19812Z Brassica rapa HOM05D000017 ORTHO05D000013 7.2e-11 70.9 80 43.8
A02p27280 Brassica napus HOM05D000017 ORTHO05D000013 1.6e-10 69.7 98 40.8
BraA01t02314Z Brassica rapa HOM05D008389 ORTHO05D043201 4.6e-10 68.2 78 42.3
BraA10t43804Z Brassica rapa HOM05D008389 ORTHO05D010630 4.6e-10 68.2 78 42.3
BolC3t19701H Brassica oleracea HOM05D008389 ORTHO05D010630 6.1e-10 67.8 78 41.0
BolC9t55634H Brassica oleracea HOM05D008389 ORTHO05D043201 6.1e-10 67.8 78 42.3
C04p57210 Brassica napus HOM05D000017 ORTHO05D000013 7.9e-10 67.4 77 45.5
A03p64330 Brassica napus HOM05D009136 ORTHO05D011560 1.0e-09 67.0 77 45.5
A04p08420 Brassica napus HOM05D014889 ORTHO05D027864 1.0e-09 67.0 39 74.4
A09p24200 Brassica napus HOM05D009136 ORTHO05D000013 1.0e-09 67.0 77 45.5
C02p34160 Brassica napus HOM05D009136 ORTHO05D000013 1.8e-09 66.2 77 44.2
BraA09t36745Z Brassica rapa HOM05D006289 ORTHO05D000013 1.8e-09 66.2 64 50.0
C05p38720 Brassica napus HOM05D034814 ORTHO05D039365 2.3e-09 65.9 61 45.9
BolC8t47819H Brassica oleracea HOM05D008389 ORTHO05D000013 8.8e-09 63.9 88 36.4
A03p57830 Brassica napus HOM05D000017 ORTHO05D000013 1.1e-08 63.5 77 44.2
BolC1t02114H Brassica oleracea HOM05D000017 ORTHO05D000013 1.1e-08 63.5 78 38.5
C04p15990 Brassica napus HOM05D000017 ORTHO05D000013 1.5e-08 63.2 77 42.9
C04p40820 Brassica napus HOM05D009136 ORTHO05D000013 1.5e-08 63.2 77 42.9
BolC4t23172H Brassica oleracea HOM05D000017 ORTHO05D000013 1.5e-08 63.2 77 42.9
A08p09560 Brassica napus HOM05D000017 ORTHO05D000013 1.9e-08 62.8 102 31.4
A08p10970 Brassica napus HOM05D009136 ORTHO05D000013 1.9e-08 62.8 77 44.2
C02p51030 Brassica napus HOM05D000017 ORTHO05D000013 1.9e-08 62.8 77 44.2
BolC8t47293H Brassica oleracea HOM05D000017 ORTHO05D000013 1.9e-08 62.8 68 44.1
THA.LOC104821604 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.9e-08 62.8 97 36.1
C01p26860 Brassica napus HOM05D000017 ORTHO05D000013 2.5e-08 62.4 77 42.9
A03p63760 Brassica napus HOM05D000017 ORTHO05D000013 3.3e-08 62.0 59 50.8
A08p09880 Brassica napus HOM05D009136 ORTHO05D000013 3.3e-08 62.0 59 50.8
Thhalv10012336m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 3.3e-08 62.0 78 37.2
THA.LOC104809906 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.3e-08 62.0 88 37.5
C04p58400 Brassica napus HOM05D009418 ORTHO05D017574 4.3e-08 61.6 84 35.7
C05p33190 Brassica napus HOM05D000017 ORTHO05D000013 4.3e-08 61.6 77 42.9
THA.LOC104809156 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.3e-08 61.6 102 36.3
C04p36610 Brassica napus HOM05D009136 ORTHO05D011560 5.7e-08 61.2 77 40.3
C05p35180 Brassica napus HOM05D000017 ORTHO05D000013 7.4e-08 60.8 77 41.6
C09p33380 Brassica napus HOM05D000017 ORTHO05D011560 7.4e-08 60.8 77 41.6
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 7.4e-08 60.8 78 38.5
C05p37060 Brassica napus HOM05D009136 ORTHO05D011560 9.7e-08 60.5 77 40.3
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.7e-08 60.5 70 35.7
THA.LOC104801857 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.3e-07 60.1 81 39.5
A05p23500 Brassica napus HOM05D000017 ORTHO05D000013 1.7e-07 59.7 101 31.7
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 1.7e-07 59.7 84 35.7
BraA05t21217Z Brassica rapa HOM05D000017 ORTHO05D000013 1.7e-07 59.7 101 31.7
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 1.7e-07 59.7 84 35.7
THA.LOC104825704 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.7e-07 59.7 81 39.5
C02p22610 Brassica napus HOM05D009136 ORTHO05D000013 2.2e-07 59.3 77 41.6
C04p20940 Brassica napus HOM05D000017 ORTHO05D000013 2.2e-07 59.3 59 49.2
C07p25820 Brassica napus HOM05D000017 ORTHO05D011560 2.2e-07 59.3 77 40.3
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-07 58.9 72 34.7
THA.LOC104817083 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.8e-07 58.9 106 34.0
C04p36260 Brassica napus HOM05D009136 ORTHO05D011560 3.7e-07 58.5 77 41.6
Dinv26433 Davidia involucrata HOM05D000017 ORTHO05D000013 3.7e-07 58.5 78 41.0
Rhsim02G0065400 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.7e-07 58.5 70 41.4
Rhsim02G0065700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.7e-07 58.5 70 41.4
Rhsim11G0079200 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.7e-07 58.5 70 41.4
A05p23630 Brassica napus HOM05D009136 ORTHO05D000013 4.8e-07 58.2 77 40.3
A09p24410 Brassica napus HOM05D011901 ORTHO05D000013 4.8e-07 58.2 74 43.2
C04p20510 Brassica napus HOM05D014889 ORTHO05D000013 4.8e-07 58.2 40 65.0
BolC2t10215H Brassica oleracea HOM05D000017 ORTHO05D000013 4.8e-07 58.2 67 44.8
THA.LOC104800036 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.8e-07 58.2 73 39.7
C02p28130 Brassica napus HOM05D009136 ORTHO05D011560 6.3e-07 57.8 77 40.3
THA.LOC104810148 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.3e-07 57.8 81 38.3
C06p05160 Brassica napus HOM05D000017 ORTHO05D000013 8.2e-07 57.4 63 38.1
BraA08t32812Z Brassica rapa HOM05D000017 ORTHO05D000013 8.2e-07 57.4 101 33.7
THA.LOC104820474 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 8.2e-07 57.4 73 38.4
C02p39170 Brassica napus HOM05D006142 ORTHO05D000013 1.1e-06 57.0 69 39.1
C04p51500 Brassica napus HOM05D009136 ORTHO05D011560 1.4e-06 56.6 77 40.3
Oeu021079.1 Olea europaea HOM05D000017 ORTHO05D000013 1.4e-06 56.6 70 40.0
A09p33970 Brassica napus HOM05D000017 ORTHO05D000013 1.8e-06 56.2 102 31.4
C01p33570 Brassica napus HOM05D009590 ORTHO05D020087 1.8e-06 56.2 80 40.0
TPR.G40323 Trifolium pratense HOM05D000017 ORTHO05D000013 1.8e-06 56.2 71 35.2
FvH4_6g31092 Fragaria vesca HOM05D000017 ORTHO05D000013 2.4e-06 55.8 74 39.2
PGR031G0508 Punica granatum HOM05D000017 ORTHO05D000013 2.4e-06 55.8 61 42.6
Aa31LG6G10560 Aethionema arabicum HOM05D000017 ORTHO05D000013 3.1e-06 55.5 72 36.1
BolC3t17680H Brassica oleracea HOM05D009136 ORTHO05D011560 3.1e-06 55.5 77 40.3
BolC7t42636H Brassica oleracea HOM05D000017 ORTHO05D000013 3.1e-06 55.5 77 33.8
Thhalv10026781m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 3.1e-06 55.5 77 26.0
THA.LOC104801856 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.1e-06 55.5 73 38.4
THA.LOC104803431 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.1e-06 55.5 71 32.4
THA.LOC104806000 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.1e-06 55.5 71 32.4
THA.LOC104808850 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.1e-06 55.5 62 35.5
THA.LOC104810570 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.1e-06 55.5 75 40.0
THA.LOC104824602 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.1e-06 55.5 71 32.4
C02p54970 Brassica napus HOM05D006142 ORTHO05D000013 4.1e-06 55.1 67 41.8
C04p39270 Brassica napus HOM05D000017 ORTHO05D000013 4.1e-06 55.1 78 39.7
BolC9t57659H Brassica oleracea HOM05D008389 ORTHO05D000013 4.1e-06 55.1 81 35.8
Duzib192G0424 Durio zibethinus HOM05D000017 ORTHO05D000013 4.1e-06 55.1 72 40.3
Hma1.2p1_1076F.1_g254590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.1e-06 55.1 70 37.1
PSO210G3669 Papaver somniferum HOM05D000017 ORTHO05D000013 4.1e-06 55.1 74 37.8
PSO761G0609 Papaver somniferum HOM05D000017 ORTHO05D000013 4.1e-06 55.1 74 36.5
THA.LOC104815186 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.1e-06 55.1 72 38.9
THA.LOC104824926 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.1e-06 55.1 73 38.4
Aa31sc107G50 Aethionema arabicum HOM05D000017 ORTHO05D009795 5.3e-06 54.7 72 38.9
Ah.12g064410 Amaranthus hybridus HOM05D000017 ORTHO05D000013 5.3e-06 54.7 57 40.4
BolC2t10361H Brassica oleracea HOM05D000017 ORTHO05D000013 5.3e-06 54.7 101 34.7
BolC5t32183H Brassica oleracea HOM05D008389 ORTHO05D000013 5.3e-06 54.7 81 35.8
BolC7t41797H Brassica oleracea HOM05D008389 ORTHO05D010630 5.3e-06 54.7 79 34.2
Hma1.2p1_1572F.1_g291350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.3e-06 54.7 70 35.7
RcHm_v2.0_Chr5g0049571 Rosa chinensis HOM05D000017 ORTHO05D000013 5.3e-06 54.7 70 31.4
THA.LOC104818540 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.3e-06 54.7 73 38.4
THA.LOC109117169 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.3e-06 54.7 81 38.3
Aa31sc119G30 Aethionema arabicum HOM05D000017 ORTHO05D009795 6.9e-06 54.3 72 34.7
CANSAT01G1754 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 54.3 69 39.1
CANSAT01G2716 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 54.3 69 39.1
CANSAT64G2354 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 54.3 67 37.3
Dinv18500 Davidia involucrata HOM05D007604 ORTHO05D008966 6.9e-06 54.3 99 32.3
Oeu010760.1 Olea europaea HOM05D000017 ORTHO05D000013 6.9e-06 54.3 78 35.9
THA.LOC104801928 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.9e-06 54.3 71 32.4
THA.LOC104817109 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.9e-06 54.3 72 37.5
THA.LOC109116471 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.9e-06 54.3 72 38.9
Atru.chr8.638 Acer truncatum HOM05D000017 ORTHO05D000013 9.1e-06 53.9 60 38.3
Atru.chr9.234 Acer truncatum HOM05D000017 ORTHO05D000013 9.1e-06 53.9 57 38.6
Atru.chr9.320 Acer truncatum HOM05D000017 ORTHO05D000013 9.1e-06 53.9 77 37.7
C07p08940 Brassica napus HOM05D000017 ORTHO05D000013 9.1e-06 53.9 61 44.3
BolC3t20958H Brassica oleracea HOM05D000017 ORTHO05D000013 9.1e-06 53.9 101 33.7
THA.LOC104800336 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.1e-06 53.9 75 38.7
THA.LOC104807849 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.1e-06 53.9 98 30.6


User provided reference genes

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