Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 6.1e-194 680.6 345 100.0
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 6.4e-191 670.6 345 98.3
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 3.2e-174 615.1 345 92.2
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 1.2e-165 586.6 360 86.7
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 6.6e-164 580.9 400 78.2
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 1.5e-152 543.1 355 80.8
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 4.9e-151 538.1 355 80.3
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 2.3e-148 529.3 351 79.2
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 5.1e-148 528.1 352 79.8
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 6.7e-148 527.7 357 78.4
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 5.6e-147 524.6 357 77.6
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 7.4e-131 471.1 380 69.2
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 4.2e-126 455.3 351 69.2
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 3.3e-115 419.1 354 63.3
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 5.7e-115 418.3 353 64.3
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 5.7e-115 418.3 353 64.3
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 8.2e-114 414.5 354 63.6
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.8e-113 413.3 354 63.0
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 2.4e-113 412.9 355 62.8
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 9.1e-113 411.0 354 62.4
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 2.6e-112 409.5 354 62.7
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 1.0e-111 407.5 355 62.5
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.7e-111 406.8 351 62.7
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 2.1e-109 399.8 358 61.2
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 4.7e-109 398.7 355 61.4
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 6.1e-109 398.3 355 60.6
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 7.9e-109 397.9 338 62.4
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 8.8e-108 394.4 351 60.7
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 3.3e-107 392.5 355 59.2
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 3.3e-107 392.5 336 61.3
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 4.4e-107 392.1 360 57.8
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 7.4e-107 391.3 361 59.6
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 3.7e-106 389.0 335 61.2
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 6.3e-106 388.3 335 60.9
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 1.1e-105 387.5 338 60.4
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 1.8e-105 386.7 362 58.0
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 3.1e-105 386.0 343 61.2
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 1.2e-104 384.0 356 57.3
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 1.6e-104 383.6 356 57.3
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 1.6e-104 383.6 351 57.5
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 2.0e-104 383.3 360 57.8
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 2.0e-104 383.3 351 60.4
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 2.6e-104 382.9 353 57.5
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 2.6e-104 382.9 360 58.6
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 3.5e-104 382.5 354 59.0
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 3.5e-104 382.5 361 58.2
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 3.5e-104 382.5 358 56.1
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 4.5e-104 382.1 355 57.5
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 5.9e-104 381.7 355 57.7
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 5.9e-104 381.7 333 62.2
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 7.7e-104 381.3 360 58.1
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 1.0e-103 380.9 337 58.5
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 1.7e-103 380.2 388 55.4
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 1.7e-103 380.2 358 58.1
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 2.9e-103 379.4 360 57.8
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.8e-103 379.0 360 57.5
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 5.0e-103 378.6 361 56.8
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 6.5e-103 378.3 345 58.0
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 6.5e-103 378.3 360 57.5
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 1.5e-102 377.1 363 57.0
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 1.9e-102 376.7 344 58.7
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 1.9e-102 376.7 335 60.6
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 3.2e-102 375.9 348 58.6
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 3.2e-102 375.9 381 54.9
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 7.2e-102 374.8 358 55.9
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 7.2e-102 374.8 345 59.1
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 1.2e-101 374.0 360 58.1
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 1.2e-101 374.0 333 59.5
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 2.3e-100 369.8 392 52.6
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 2.3e-100 369.8 364 56.3
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 3.0e-100 369.4 342 57.9
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 6.7e-100 368.2 337 57.9
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 2.6e-99 366.3 335 58.8
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 2.6e-99 366.3 345 55.9
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 2.6e-99 366.3 358 54.7
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 3.3e-99 365.9 359 54.9
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 5.7e-99 365.2 360 54.7
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 5.7e-99 365.2 358 54.5
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 2.8e-98 362.8 355 55.5
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 2.8e-98 362.8 331 57.7
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 3.7e-98 362.5 341 57.5
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 4.8e-98 362.1 350 55.4
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 6.3e-98 361.7 343 57.1
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 8.2e-98 361.3 341 55.7
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 3.1e-97 359.4 315 60.0
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 3.1e-97 359.4 336 55.7
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 1.6e-96 357.1 341 56.3
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 7.7e-96 354.8 331 56.5
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 5.0e-95 352.1 308 61.4
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 2.5e-94 349.7 358 53.4
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 4.7e-93 345.5 351 53.8
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 1.5e-91 340.5 340 53.5
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 1.5e-91 340.5 383 49.1
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 4.4e-91 339.0 357 55.2
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 9.8e-91 337.8 359 51.8
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 4.8e-90 335.5 344 51.7
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 2.4e-89 333.2 338 55.6
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 5.4e-89 332.0 362 50.8
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 2.0e-88 330.1 313 57.8
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 3.5e-88 329.3 350 49.7
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.7e-87 327.0 311 55.9
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 1.7e-87 327.0 345 51.9
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 2.2e-87 326.6 308 56.8
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 8.5e-87 324.7 338 50.9
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 9.5e-86 321.2 326 53.4
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 2.1e-85 320.1 308 55.8
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 3.6e-85 319.3 290 59.3
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 4.7e-85 318.9 340 50.3
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 4.7e-85 318.9 365 50.7
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.8e-84 317.0 339 53.4
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 8.8e-84 314.7 345 49.6
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.7e-82 310.5 346 49.4
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 1.7e-82 310.5 337 49.6
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 1.7e-82 310.5 308 57.1
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.2e-82 310.1 339 49.9
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 2.2e-82 310.1 324 54.6
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 6.3e-82 308.5 337 49.9
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 6.3e-82 308.5 337 49.9
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 1.1e-81 307.8 337 49.3
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 1.8e-81 307.0 337 49.9
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 9.2e-81 304.7 347 48.4
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 2.7e-80 303.1 337 48.7
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 7.8e-80 301.6 337 48.4
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 2.8e-77 293.1 353 46.2
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 9.8e-75 284.6 244 62.7
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 8.3e-74 281.6 311 49.2
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 2.4e-73 280.0 354 42.7
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 5.4e-73 278.9 240 62.1
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 2.7e-72 276.6 328 47.6
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 4.6e-72 275.8 255 56.9
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 4.6e-72 275.8 253 58.5
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 8.6e-71 271.6 333 45.6
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 3.1e-68 263.1 365 43.0
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 4.0e-68 262.7 368 42.4
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 7.8e-64 248.4 338 42.9
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 7.8e-64 248.4 363 39.7
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 1.0e-63 248.1 306 49.3
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.2e-61 241.1 300 44.3
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 3.7e-58 229.6 236 51.7
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.2e-56 224.6 227 55.9
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.3e-50 204.5 163 62.6
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.1e-38 164.9 161 51.6
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.1e-38 164.9 161 51.6
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 9.6e-38 161.8 139 61.2
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 6.0e-32 142.5 352 29.8
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 7.9e-32 142.1 148 50.7
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 3.7e-29 133.3 111 62.2
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 1.7e-26 124.4 96 63.5
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 4.2e-25 119.8 336 28.6
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.1e-24 117.5 112 58.9
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 2.1e-24 117.5 127 51.2
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 4.3e-22 109.8 321 27.7
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 6.2e-21 105.9 157 43.3
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 5.3e-20 102.8 84 57.1
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 1.6e-16 91.3 254 29.9
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 2.9e-10 70.5 46 65.2


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