Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 2.2e-266 921.8 481 100.0
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 2.2e-258 895.2 481 95.0
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 6.4e-258 893.6 481 97.1
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 2.3e-255 885.2 481 97.1
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 3.0e-247 858.2 481 95.2
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 7.4e-246 853.6 478 88.7
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 7.4e-246 853.6 478 88.7
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 1.3e-245 852.8 478 91.6
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 4.0e-244 847.8 479 88.1
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 6.9e-244 847.0 478 87.7
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 5.8e-243 844.0 478 88.7
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 5.8e-243 844.0 478 88.3
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 6.5e-242 840.5 479 88.1
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.6e-240 835.9 478 93.1
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 1.0e-239 833.2 478 92.7
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 4.8e-237 824.3 478 87.2
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 2.0e-222 775.8 482 80.1
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 4.4e-222 774.6 481 86.3
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.0e-215 753.4 482 77.0
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.7e-213 746.1 481 76.9
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 3.7e-213 745.0 482 76.3
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 4.8e-213 744.6 481 76.9
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 8.2e-213 743.8 394 88.3
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 8.2e-213 743.8 482 75.7
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 1.4e-212 743.0 483 76.6
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 1.8e-212 742.7 484 76.4
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.8e-212 742.7 482 76.3
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.4e-212 742.3 480 76.9
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 2.4e-212 742.3 483 77.0
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 4.1e-212 741.5 395 88.4
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 4.1e-212 741.5 483 76.8
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 5.3e-212 741.1 480 75.6
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 5.3e-212 741.1 397 88.9
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 5.3e-212 741.1 482 76.1
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 7.0e-212 740.7 484 76.2
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 9.1e-212 740.3 483 76.4
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 9.1e-212 740.3 484 76.7
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.6e-211 739.6 485 77.1
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 1.6e-211 739.6 483 77.2
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 2.0e-211 739.2 480 75.8
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 2.0e-211 739.2 487 76.2
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.0e-211 739.2 480 76.9
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.0e-211 739.2 480 76.9
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 2.0e-211 739.2 488 76.4
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.0e-211 739.2 394 89.1
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 2.0e-211 739.2 394 88.8
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 3.5e-211 738.4 480 75.8
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 4.5e-211 738.0 488 76.2
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 5.9e-211 737.6 494 74.5
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 5.9e-211 737.6 394 88.8
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 5.9e-211 737.6 393 89.1
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 5.9e-211 737.6 478 77.6
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 5.9e-211 737.6 484 76.4
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 7.7e-211 737.3 481 75.5
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.0e-210 736.9 483 76.2
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 1.3e-210 736.5 478 76.4
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 1.3e-210 736.5 487 76.8
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.7e-210 736.1 482 76.8
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.7e-210 736.1 397 87.7
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 1.7e-210 736.1 394 87.6
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 2.2e-210 735.7 394 88.8
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.9e-210 735.3 482 75.9
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.8e-210 734.9 480 75.6
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.8e-210 734.9 397 87.4
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.8e-210 734.9 394 88.6
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 5.0e-210 734.6 394 88.3
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 6.5e-210 734.2 483 75.4
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.5e-210 733.8 483 76.2
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 1.1e-209 733.4 482 76.3
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 1.9e-209 732.6 483 75.8
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.9e-209 732.6 488 74.8
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 1.9e-209 732.6 394 87.3
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 1.9e-209 732.6 483 75.8
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 4.2e-209 731.5 482 75.9
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 7.2e-209 730.7 480 75.2
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 9.4e-209 730.3 480 74.4
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.2e-208 729.9 394 88.1
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.6e-208 729.6 485 74.8
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 2.1e-208 729.2 481 74.4
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 3.6e-208 728.4 484 75.6
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 3.6e-208 728.4 487 74.9
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 6.1e-208 727.6 394 87.1
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 1.0e-207 726.9 483 74.1
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.4e-207 726.5 480 74.6
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 1.4e-207 726.5 488 74.4
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 1.8e-207 726.1 482 74.3
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.8e-207 726.1 486 75.3
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 2.3e-207 725.7 394 87.1
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 2.3e-207 725.7 480 74.6
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 3.0e-207 725.3 482 73.7
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 3.0e-207 725.3 481 74.0
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 8.8e-207 723.8 485 74.8
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 2.0e-206 722.6 490 73.5
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 5.7e-206 721.1 480 74.6
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 7.5e-206 720.7 397 85.1
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 9.7e-206 720.3 394 86.3
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.3e-205 719.9 392 85.5
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 1.6e-203 713.0 513 70.8
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 1.8e-196 689.5 393 83.5
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.8e-191 672.9 357 88.2
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 2.3e-191 672.5 393 79.1
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 7.5e-190 667.5 396 78.5
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 9.8e-190 667.2 391 79.8
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 9.8e-190 667.2 398 78.9
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 3.7e-189 665.2 396 80.8
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 1.3e-186 656.8 386 79.0
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 2.2e-173 612.8 390 73.1
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 2.2e-165 586.3 386 75.4
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.1e-164 582.0 344 82.0
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 2.1e-163 579.7 378 69.6
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 3.5e-163 578.9 391 72.9
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 7.8e-163 577.8 392 67.1
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 2.4e-151 539.7 286 89.9
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 1.5e-150 537.0 286 89.5
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.6e-136 490.3 268 84.0
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.5e-134 483.8 254 85.8
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.3e-103 379.0 237 77.2
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.3e-98 363.6 191 85.3
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 4.1e-79 299.7 171 81.9
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.3e-61 241.5 196 62.8
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 9.5e-60 235.3 130 84.6
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.4e-55 220.7 130 82.3
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.6e-54 218.0 136 76.5
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 2.4e-47 194.1 140 73.6
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 3.4e-33 147.1 94 76.6
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 2.1e-30 137.9 105 65.7
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 7.4e-28 129.4 160 46.2
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 4.6e-14 83.6 59 69.5
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 7.6e-09 66.2 128 31.2
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 4.2e-07 60.5 155 29.7
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.6e-06 58.5 128 31.2
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 2.1e-06 58.2 154 26.0
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 7.9e-06 56.2 125 28.8


User provided reference genes

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