Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 6.1e-163 577.4 288 100.0
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 4.5e-81 305.4 235 73.2
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 3.9e-69 265.8 289 56.7
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 2.6e-68 263.1 264 61.4
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 5.7e-68 261.9 264 60.6
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 9.7e-68 261.2 184 76.6
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 1.7e-67 260.4 264 61.0
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 2.8e-67 259.6 264 60.2
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 8.2e-67 258.1 264 58.7
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.1e-66 257.7 261 61.7
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 6.9e-66 255.0 284 56.7
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 6.9e-66 255.0 284 56.7
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 1.2e-65 254.2 264 60.2
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 5.9e-65 251.9 264 59.5
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.0e-64 251.1 264 58.3
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 2.1e-62 243.4 264 56.4
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 4.7e-62 242.3 289 56.1
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 3.3e-60 236.1 265 56.2
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 6.3e-59 231.9 265 54.7
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.1e-58 231.1 265 52.1
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.1e-58 231.1 265 52.1
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 2.4e-58 229.9 269 53.9
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.6e-57 227.3 267 53.9
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.0e-57 226.9 267 53.9
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 2.0e-57 226.9 267 55.4
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 2.6e-57 226.5 266 53.0
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 7.7e-57 224.9 291 49.8
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 7.7e-57 224.9 264 52.7
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.3e-56 224.2 292 48.6
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.2e-56 223.4 264 52.3
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 2.9e-56 223.0 261 51.7
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 3.8e-56 222.6 301 48.8
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 5.0e-56 222.2 269 51.7
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 5.0e-56 222.2 265 50.2
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 6.5e-56 221.9 266 51.1
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.5e-55 220.7 266 50.8
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 1.5e-55 220.7 266 51.1
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 4.2e-55 219.2 262 52.3
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 5.5e-55 218.8 262 52.7
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 7.2e-55 218.4 259 51.4
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 9.4e-55 218.0 266 50.8
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.2e-54 217.6 267 49.8
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.2e-54 217.6 267 49.8
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 1.2e-54 217.6 180 63.9
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 2.1e-54 216.9 262 51.1
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.7e-54 216.5 265 49.8
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 3.6e-54 216.1 183 69.4
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 3.6e-54 216.1 288 49.3
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 3.6e-54 216.1 265 49.8
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 4.7e-54 215.7 264 50.4
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 4.7e-54 215.7 266 51.5
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 6.1e-54 215.3 267 49.8
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 6.1e-54 215.3 269 49.1
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.0e-53 214.5 291 49.1
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.0e-53 214.5 267 50.2
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.4e-53 214.2 267 49.4
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.4e-53 214.2 264 50.0
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.8e-53 213.8 208 58.2
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.8e-53 213.8 219 55.3
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.8e-53 213.8 181 61.9
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.8e-53 213.8 267 49.8
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.8e-53 213.8 264 50.0
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 5.2e-53 212.2 285 48.1
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 5.2e-53 212.2 269 50.9
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 8.8e-53 211.5 264 49.6
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 8.8e-53 211.5 181 61.3
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.2e-52 211.1 264 48.9
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 2.0e-52 210.3 180 62.2
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 2.6e-52 209.9 184 61.4
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 2.6e-52 209.9 180 62.2
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 2.6e-52 209.9 208 57.2
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 3.3e-52 209.5 180 61.1
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 3.3e-52 209.5 180 61.1
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 4.4e-52 209.1 333 43.8
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 4.4e-52 209.1 205 56.6
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 5.7e-52 208.8 265 50.9
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 5.7e-52 208.8 273 47.3
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 9.7e-52 208.0 180 61.1
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.3e-51 207.6 286 47.9
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.3e-51 207.6 265 49.8
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.3e-51 207.6 184 62.5
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.3e-51 207.6 267 48.7
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 1.3e-51 207.6 289 46.7
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.2e-51 206.8 205 57.1
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 2.2e-51 206.8 266 50.8
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 2.2e-51 206.8 290 47.6
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 2.8e-51 206.5 265 48.3
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 3.7e-51 206.1 265 47.5
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 6.3e-51 205.3 276 49.3
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 1.4e-50 204.1 264 48.5
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 3.1e-50 203.0 267 48.3
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 3.1e-50 203.0 265 46.8
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 9.1e-50 201.4 205 56.1
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.2e-49 201.1 284 46.8
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 4.5e-49 199.1 268 47.4
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 7.7e-49 198.4 271 46.5
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.9e-48 196.4 266 48.1
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 6.5e-48 195.3 264 44.3
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 1.1e-47 194.5 255 48.2
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 7.2e-47 191.8 180 57.8
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 7.2e-47 191.8 263 47.1
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 2.1e-46 190.3 254 50.0
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.1e-46 190.3 263 47.5
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 2.1e-46 190.3 263 47.1
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 1.8e-45 187.2 149 71.1
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 3.0e-45 186.4 266 47.4
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.0e-45 186.0 269 44.2
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 8.8e-45 184.9 295 43.1
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 2.8e-43 179.9 293 40.6
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.7e-43 179.5 293 40.3
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 1.4e-42 177.6 119 76.5
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 1.4e-42 177.6 183 53.0
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 1.6e-38 164.1 133 65.4
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.4e-37 161.0 187 47.6
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 6.8e-37 158.7 109 72.5
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 8.8e-37 158.3 162 62.3
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.2e-36 157.9 254 42.1
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 5.7e-36 155.6 257 39.3
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.1e-34 151.4 109 69.7
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 4.1e-34 149.4 236 48.7
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 2.0e-33 147.1 279 36.2
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.3e-32 144.4 263 39.5
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 2.3e-32 143.7 183 43.7
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 6.6e-32 142.1 210 40.0
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 4.3e-31 139.4 180 41.7
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.1e-30 137.1 203 46.8
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 6.8e-29 132.1 183 42.6
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.0e-24 116.7 102 60.8
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 1.5e-23 114.4 267 35.6
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.8e-20 102.4 286 32.9
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.7e-19 100.9 286 32.9
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 6.6e-08 62.4 97 43.3
A03p61550 Brassica napus HOM05D005681 ORTHO05D097761 3.6e-06 56.6 39 79.5


User provided reference genes

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