Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p59230 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-69 265.4 136 100.0
A03p61410 Brassica napus HOM05D000051 ORTHO05D000015 8.4e-62 240.4 126 96.8
BolC7t46369H Brassica oleracea HOM05D000051 ORTHO05D000015 1.4e-61 239.6 126 96.8
BraA03t15039Z Brassica rapa HOM05D000051 ORTHO05D000015 4.8e-49 198.0 126 81.7
BcaNung03949 Brassica carinata HOM05D000051 ORTHO05D000015 4.3e-42 174.9 126 75.4
Thhalv10027331m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.4e-31 138.7 122 59.0
Thhalv10017690m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.1e-27 124.8 123 55.3
BcaC02g07457 Brassica carinata HOM05D000051 ORTHO05D000015 5.9e-23 111.3 120 50.0
C04p66760 Brassica napus HOM05D000051 ORTHO05D000015 5.9e-23 111.3 120 50.0
AL7G27750 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.0e-22 108.2 124 51.6
A03p59830 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-22 108.2 75 77.3
Carub.0007s0781 Capsella rubella HOM05D000051 ORTHO05D000015 1.1e-21 107.1 126 52.4
BcaB01g03636 Brassica carinata HOM05D000051 ORTHO05D000015 1.4e-21 106.7 124 53.2
A08p34660 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-20 103.6 122 48.4
BraA08t35378Z Brassica rapa HOM05D000051 ORTHO05D000015 1.2e-20 103.6 122 48.4
BcaNung03591 Brassica carinata HOM05D000051 ORTHO05D018454 1.6e-20 103.2 54 98.1
BraA08t35374Z Brassica rapa HOM05D000051 ORTHO05D000015 1.6e-20 103.2 122 48.4
C04p66770 Brassica napus HOM05D000051 ORTHO05D000015 3.6e-20 102.1 123 46.3
C08p12680 Brassica napus HOM05D000051 ORTHO05D000015 3.6e-20 102.1 122 49.2
A08p34630 Brassica napus HOM05D000051 ORTHO05D000015 6.1e-20 101.3 122 48.4
BolC8t48903H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-19 99.8 122 48.4
BraA08t35372Z Brassica rapa HOM05D000051 ORTHO05D000015 1.8e-19 99.8 122 48.4
C08p12660 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-19 99.4 122 48.4
AL8G15660 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-18 96.7 114 47.4
Carub.0008s0420 Capsella rubella HOM05D000051 ORTHO05D000015 2.5e-18 95.9 126 42.9
Carub.0001s0436 Capsella rubella HOM05D000051 ORTHO05D000015 2.2e-17 92.8 121 45.5
Thhalv10029506m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.7e-17 92.0 123 44.7
Thhalv10003402m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.8e-17 91.7 121 46.3
A03p58220 Brassica napus HOM05D000051 ORTHO05D000015 8.2e-17 90.9 123 43.9
A03p58250 Brassica napus HOM05D000051 ORTHO05D000015 8.2e-17 90.9 123 43.9
AL1G14840 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.4e-16 89.4 124 44.4
BcaC07g38494 Brassica carinata HOM05D000051 ORTHO05D000015 2.4e-16 89.4 107 47.7
Thhalv10005273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.7e-15 84.3 120 43.3
AT1G05080 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.3e-14 83.6 122 42.6
A03p58230 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-13 80.1 113 43.4
A03p58240 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-13 80.1 113 43.4
BraA03t14887Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-13 80.1 113 43.4
BraA03t14888Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-13 80.1 113 43.4
Carub.0006s3287 Capsella rubella HOM05D000051 ORTHO05D000015 1.4e-13 80.1 108 48.1
BcaC06g31631 Brassica carinata HOM05D000051 ORTHO05D000015 1.9e-13 79.7 121 43.0
BcaC06g34571 Brassica carinata HOM05D000051 ORTHO05D000015 2.1e-12 76.3 121 41.3
BolC7t43232H Brassica oleracea HOM05D000051 ORTHO05D000015 2.1e-12 76.3 121 41.3
C07p27010 Brassica napus HOM05D000051 ORTHO05D000015 2.7e-12 75.9 121 41.3
Carub.0008s0416 Capsella rubella HOM05D000051 ORTHO05D000015 3.6e-12 75.5 147 36.1
BcaB05g23264 Brassica carinata HOM05D000051 ORTHO05D000015 4.7e-12 75.1 74 50.0
Thhalv10001111m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.9e-12 74.3 126 42.9
CARHR158440 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.3e-11 72.8 118 40.7
Sp3g09080 Schrenkiella parvula HOM05D000051 ORTHO05D000015 6.7e-11 71.2 125 40.0
CARHR178840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.1e-10 70.5 125 43.2
BraA09t39638Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-10 70.1 124 40.3
A09p41460 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-10 69.3 124 40.3
AT5G40750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.7e-10 67.4 98 44.9
Carub.0004s2887 Capsella rubella HOM05D000051 ORTHO05D000015 9.7e-10 67.4 126 37.3
C05p22510 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-09 66.2 130 37.7
BolC5t30949H Brassica oleracea HOM05D000051 ORTHO05D000015 3.7e-09 65.5 132 37.1
Carub.0006s2253 Capsella rubella HOM05D000051 ORTHO05D000015 3.7e-09 65.5 120 36.7
AL3G22250 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.8e-09 65.1 123 39.8
AL6G35130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.3e-09 64.7 121 35.5
BcaB05g24481 Brassica carinata HOM05D000051 ORTHO05D000015 6.3e-09 64.7 71 50.7
Carub.0002s0899 Capsella rubella HOM05D000051 ORTHO05D000015 8.2e-09 64.3 123 39.8
Thhalv10028348m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-08 63.9 122 35.2
AL3G22240 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 1.4e-08 63.5 127 37.8
BolC9t55418H Brassica oleracea HOM05D000051 ORTHO05D000015 1.4e-08 63.5 122 32.8
C09p25230 Brassica napus HOM05D003563 ORTHO05D005325 1.8e-08 63.2 122 32.8
CARHR158480 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-08 63.2 118 38.1
A09p19900 Brassica napus HOM05D003563 ORTHO05D005325 4.1e-08 62.0 120 32.5
A09p46570 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-08 62.0 124 35.5
CARHR141500 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.1e-08 62.0 128 35.2
AL7G48980 Arabidopsis lyrata HOM05D000051 ORTHO05D026829 5.3e-08 61.6 71 46.5
Sp3g31850 Schrenkiella parvula HOM05D000051 ORTHO05D000015 9.1e-08 60.8 122 34.4
Thhalv10009991m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.2e-07 60.5 152 33.6
BcaC04g21979 Brassica carinata HOM05D000051 ORTHO05D000015 1.5e-07 60.1 122 32.8
Carub.0007s3567 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-07 60.1 123 34.1
AL6G36280 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.0e-07 59.7 123 31.7
BcaC06g35108 Brassica carinata HOM05D000051 ORTHO05D000015 2.0e-07 59.7 124 36.3
A09p40240 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-07 59.7 130 39.2
BraA09t39522Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-07 59.7 130 39.2
AL7G49240 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.6e-07 59.3 122 33.6
AL2G12050 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.5e-07 58.5 123 36.6
AL4G25900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.0e-06 57.4 118 36.4
A04p06040 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-06 57.0 122 34.4
C04p39010 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-06 57.0 122 34.4
BraA04t16308Z Brassica rapa HOM05D000051 ORTHO05D000015 1.3e-06 57.0 122 34.4
AL3G22230 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-06 56.6 136 34.6
AT5G44850 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.7e-06 56.6 108 38.0
Carub.0003s0998 Capsella rubella HOM05D000051 ORTHO05D000015 1.7e-06 56.6 126 37.3
BcaB01g00264 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-06 56.2 100 40.0
BcaC02g09153 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-06 56.2 122 33.6
BolC4t25471H Brassica oleracea HOM05D000051 ORTHO05D000015 2.2e-06 56.2 122 33.6
Carub.0006s0548 Capsella rubella HOM05D000051 ORTHO05D000015 2.2e-06 56.2 123 35.0
Aa31sc352G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.9e-06 55.8 129 37.2
C05p57370 Brassica napus HOM05D000051 ORTHO05D000015 2.9e-06 55.8 123 34.1
BolC5t34393H Brassica oleracea HOM05D000051 ORTHO05D000015 2.9e-06 55.8 123 34.1
BolC8t48902H Brassica oleracea HOM05D000051 ORTHO05D000015 2.9e-06 55.8 60 46.7
Carub.0008s1685 Capsella rubella HOM05D000051 ORTHO05D000015 2.9e-06 55.8 124 34.7
CARHR158450 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.9e-06 55.8 88 40.9
Carub.0007s2619 Capsella rubella HOM05D000051 ORTHO05D000015 3.8e-06 55.5 123 35.0
Carub.0320s0001 Capsella rubella HOM05D000051 ORTHO05D000015 3.8e-06 55.5 159 30.2
CARHR174900 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.0e-06 55.1 85 37.6
Aa31sc535G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 8.5e-06 54.3 131 35.9
BraA09t37599Z Brassica rapa HOM05D000051 ORTHO05D000015 8.5e-06 54.3 110 30.9


User provided reference genes

Program Settings