Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 0.0e+00 1363.2 703 100.0
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 0.0e+00 1361.3 703 99.9
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 0.0e+00 1324.3 704 97.2
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 0.0e+00 1324.3 704 97.6
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 0.0e+00 1317.4 705 96.9
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 0.0e+00 1281.5 712 94.0
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 0.0e+00 1246.9 708 90.7
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 0.0e+00 1239.2 709 90.0
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 0.0e+00 1231.9 711 89.5
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 0.0e+00 1231.1 710 89.6
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 0.0e+00 1226.8 701 90.2
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 0.0e+00 1164.4 709 84.8
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 0.0e+00 1113.2 708 80.6
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 4.5e-284 981.1 697 72.5
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.4e-282 976.1 686 72.4
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 7.9e-281 970.3 690 72.5
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 6.7e-280 967.2 684 72.7
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 8.7e-280 966.8 709 69.5
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 1.9e-279 965.7 691 72.2
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 8.2e-278 960.3 689 71.8
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 3.4e-276 954.9 713 69.7
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 4.5e-276 954.5 685 71.2
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 6.5e-275 950.7 684 71.8
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 1.1e-274 949.9 684 71.5
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.4e-274 949.5 684 71.6
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.4e-272 943.0 706 69.8
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 3.0e-272 941.8 697 68.7
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 1.5e-271 939.5 710 70.4
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 2.0e-271 939.1 698 69.3
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 2.0e-271 939.1 698 69.3
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 3.3e-271 938.3 691 70.2
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 7.4e-271 937.2 689 68.8
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 9.7e-271 936.8 698 69.6
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.2e-270 935.6 711 68.9
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 6.3e-270 934.1 730 66.3
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 2.4e-269 932.2 698 69.3
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 6.9e-269 930.6 699 68.1
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 6.9e-269 930.6 701 68.0
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.2e-268 929.9 699 68.0
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.5e-268 929.5 680 69.3
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 7.7e-268 927.2 680 70.4
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 7.7e-268 927.2 686 68.7
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.7e-267 926.0 662 70.4
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 2.2e-267 925.6 676 69.1
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 8.5e-267 923.7 666 72.7
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 1.2e-265 919.8 695 67.6
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 2.7e-265 918.7 711 68.6
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 1.0e-264 916.8 681 68.1
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 1.8e-264 916.0 679 68.3
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 3.0e-264 915.2 682 68.3
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 8.8e-264 913.7 670 69.1
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 1.3e-262 909.8 728 65.1
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.3e-262 909.8 713 66.1
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 2.8e-262 908.7 688 68.0
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 4.8e-262 907.9 696 67.8
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 9.1e-261 903.7 665 71.1
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 2.0e-260 902.5 695 68.8
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 2.6e-260 902.1 675 69.0
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 7.7e-260 900.6 701 67.2
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 1.3e-259 899.8 678 68.1
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 2.5e-258 895.6 686 67.8
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 3.2e-258 895.2 699 66.5
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 3.2e-258 895.2 669 70.0
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 1.2e-257 893.3 705 65.5
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 2.1e-257 892.5 729 65.6
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 3.9e-256 888.3 709 66.1
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.5e-255 886.3 680 67.5
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.7e-251 872.8 704 65.9
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 8.5e-251 870.5 657 67.7
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 2.1e-249 865.9 689 65.5
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.7e-249 865.5 668 67.2
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 8.8e-248 860.5 685 64.8
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 5.7e-247 857.8 671 66.5
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.3e-246 856.7 706 64.4
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 4.1e-245 851.7 602 72.3
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 8.5e-243 844.0 693 66.5
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.8e-240 836.3 614 70.0
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 1.2e-239 833.6 667 63.6
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 3.7e-238 828.6 755 60.1
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 2.0e-236 822.8 708 63.7
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 7.7e-236 820.8 711 63.7
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 9.5e-234 813.9 656 64.0
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 4.0e-232 808.5 604 66.7
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 8.6e-227 790.8 596 68.1
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 3.7e-222 775.4 613 67.0
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.9e-221 773.1 682 60.6
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 3.9e-219 765.4 572 68.4
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 1.2e-215 753.8 572 67.5
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 2.0e-215 753.1 635 62.4
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 6.6e-211 738.0 612 61.9
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 3.0e-187 659.4 654 54.7
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 3.1e-184 649.4 1251 36.0
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 1.2e-180 637.5 657 54.0
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 2.1e-180 636.7 613 56.8
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 6.5e-174 615.1 662 51.2
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 4.8e-169 599.0 401 74.8
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 3.2e-165 586.3 438 68.5
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 3.4e-151 539.7 401 65.8
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 1.2e-140 504.6 728 43.5
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.4e-139 501.1 415 65.1
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 9.4e-133 478.4 620 45.8
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 2.1e-132 477.2 473 53.5
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 9.4e-125 451.8 332 67.5
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 4.5e-119 433.0 287 81.2
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.7e-110 404.4 273 72.2
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 3.5e-95 353.6 225 76.9
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 1.3e-94 351.7 462 48.9
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 5.2e-91 339.7 314 60.5
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 5.1e-86 323.2 284 62.3
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 4.4e-82 310.1 203 76.8
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 8.4e-81 305.8 310 58.4
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 8.7e-78 295.8 203 71.9
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 4.2e-72 276.9 623 33.5
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 6.5e-57 226.5 155 71.6
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 2.7e-47 194.5 148 64.2
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 1.9e-40 171.8 203 52.2
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 1.8e-38 165.2 155 58.7
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.4e-32 145.6 102 67.6
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 2.0e-26 125.2 109 61.5
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.3e-25 122.5 106 64.2
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 6.1e-23 113.6 152 48.7
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 5.3e-19 100.5 129 46.5
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 3.8e-17 94.4 68 70.6
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 3.6e-15 87.8 53 75.5
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 6.8e-14 83.6 151 39.1
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 8.3e-12 76.6 113 46.0


User provided reference genes

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