Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p57710 Brassica napus HOM05D003020 ORTHO05D003226 1.6e-141 506.1 264 100.0
BolC7t46232H Brassica oleracea HOM05D003020 ORTHO05D003226 1.6e-141 506.1 264 100.0
A03p59690 Brassica napus HOM05D003020 ORTHO05D003226 5.5e-134 481.1 264 92.8
BraA03t15021Z Brassica rapa HOM05D003020 ORTHO05D003226 6.9e-129 464.2 264 90.2
Sp7g28110 Schrenkiella parvula HOM05D003020 ORTHO05D003226 1.1e-97 360.5 267 76.8
Thhalv10026023m.g Eutrema salsugineum HOM05D003020 ORTHO05D003226 5.3e-97 358.2 264 75.0
BcaNung00532 Brassica carinata HOM05D003020 ORTHO05D003226 2.2e-90 336.3 220 81.4
AT4G30230 Arabidopsis thaliana HOM05D003020 ORTHO05D003226 2.0e-88 329.7 271 67.2
AL7G21920 Arabidopsis lyrata HOM05D003020 ORTHO05D003226 8.5e-87 324.3 274 66.1
BcaC09g51805 Brassica carinata HOM05D003020 ORTHO05D003226 5.7e-83 311.6 267 65.9
C01p08830 Brassica napus HOM05D003020 ORTHO05D003226 5.7e-83 311.6 267 65.9
BolC1t00873H Brassica oleracea HOM05D003020 ORTHO05D003226 5.7e-83 311.6 267 65.9
BcaNung03008 Brassica carinata HOM05D003020 ORTHO05D003226 6.3e-82 308.1 268 66.4
Carub.0007s1038 Capsella rubella HOM05D003020 ORTHO05D003226 1.8e-81 306.6 272 63.6
A01p07910 Brassica napus HOM05D003020 ORTHO05D003226 4.5e-80 302.0 267 64.0
BraA01t00737Z Brassica rapa HOM05D003020 ORTHO05D003226 4.5e-80 302.0 267 64.0
CARHR238140 Cardamine hirsuta HOM05D003020 ORTHO05D003226 6.6e-79 298.1 265 63.8
Aa31LG2G20290 Aethionema arabicum HOM05D003020 ORTHO05D003226 2.4e-57 226.5 281 53.0
THA.LOC104803497 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 5.4e-57 225.3 294 51.7
THA.LOC104819978 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 5.6e-54 215.3 249 52.6
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 1.3e-29 134.4 277 39.4
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 4.8e-29 132.5 246 38.6
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 1.8e-28 130.6 245 37.6
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 1.2e-27 127.9 247 39.3
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 1.5e-27 127.5 244 37.3
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 5.8e-27 125.6 250 39.2
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.4e-25 120.9 236 36.4
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 1.9e-25 120.6 246 37.4
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 3.2e-25 119.8 274 39.1
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 4.2e-25 119.4 242 36.4
Sabra18G0080000 Salix brachista HOM05D003020 ORTHO05D003226 4.2e-25 119.4 224 38.4
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 9.3e-25 118.2 245 37.1
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 9.3e-25 118.2 225 38.2
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 3.5e-24 116.3 260 36.9
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 4.6e-24 115.9 253 36.4
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 1.0e-23 114.8 247 35.2
Potri.018G092800 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.0e-23 114.8 245 37.1
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.3e-23 114.4 246 37.4
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 1.8e-23 114.0 244 37.7
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 3.9e-23 112.8 243 36.6
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 6.7e-23 112.1 239 36.0
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 8.7e-23 111.7 247 36.4
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 1.5e-22 110.9 245 36.3
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 1.5e-22 110.9 230 35.2
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 1.9e-22 110.5 244 36.1
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.9e-22 110.5 244 36.9
Manes.14G153500 Manihot esculenta HOM05D003020 ORTHO05D003226 1.9e-22 110.5 244 34.8
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 4.3e-22 109.4 246 36.2
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 7.4e-22 108.6 247 36.0
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 7.4e-22 108.6 242 34.3
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 9.6e-22 108.2 236 35.2
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.6e-21 107.5 247 35.6
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 2.1e-21 107.1 261 35.2
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.8e-21 106.7 262 35.5
Lj4g0004544 Lotus japonicus HOM05D003020 ORTHO05D003226 6.2e-21 105.5 238 36.6
Potri.006G168400 Populus trichocarpa HOM05D003020 ORTHO05D003226 6.2e-21 105.5 243 33.7
DCAR_014702 Daucus carota HOM05D003020 ORTHO05D003226 8.1e-21 105.1 245 35.1
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 8.1e-21 105.1 232 36.6
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 1.1e-20 104.8 245 36.7
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.1e-20 104.8 249 35.7
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 1.4e-20 104.4 234 35.9
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 1.8e-20 104.0 240 34.6
Manes.14G153400 Manihot esculenta HOM05D003020 ORTHO05D003226 2.4e-20 103.6 243 36.2
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 4.0e-20 102.8 242 37.6
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 5.3e-20 102.4 233 36.9
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 9.0e-20 101.7 249 34.9
FAN22G0428 Fragaria x ananassa HOM05D003020 ORTHO05D003226 9.0e-20 101.7 249 34.9
Ciclev10010534m.g Citrus clementina HOM05D003020 ORTHO05D003226 1.5e-19 100.9 245 32.2
Lalb_Chr07g0180461 Lupinus albus HOM05D003020 ORTHO05D003226 1.5e-19 100.9 201 35.8
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 1.5e-19 100.9 237 34.6
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 1.5e-19 100.9 248 35.1
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 2.6e-19 100.1 247 35.2
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.6e-19 100.1 254 35.0
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 1.0e-18 98.2 286 32.5
Ciclev10010819m.g Citrus clementina HOM05D003020 ORTHO05D003226 2.2e-18 97.1 267 34.8
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 8.4e-18 95.1 252 34.1
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 8.4e-18 95.1 252 34.1
DCAR_017969 Daucus carota HOM05D003020 ORTHO05D003226 8.4e-18 95.1 234 34.2
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-17 94.7 237 35.0
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 2.5e-17 93.6 227 34.8
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.2e-17 93.2 245 34.7
Gorai.004G099800 Gossypium raimondii HOM05D003020 ORTHO05D003226 4.2e-17 92.8 161 39.8
Lsat_1_v5_gn_7_54521 Lactuca sativa HOM05D003020 ORTHO05D003226 4.2e-17 92.8 245 35.1
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 1.6e-16 90.9 241 34.0
SalBow6G2220 Salvia bowleyana HOM05D003020 ORTHO05D003226 2.1e-16 90.5 246 36.2
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.5e-16 89.7 239 34.7
Oeu004196.1 Olea europaea HOM05D003020 ORTHO05D003226 1.0e-15 88.2 231 30.7
TWI63G1498 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.3e-15 87.8 244 34.8
Lj9C24T7 Lonicera japonica HOM05D003020 ORTHO05D003226 3.0e-15 86.7 236 34.3
Sabra06G0129900 Salix brachista HOM05D003020 ORTHO05D003226 3.0e-15 86.7 200 34.0
TWI34G0269 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 3.0e-15 86.7 265 35.8
Eucgr.C00156 Eucalyptus grandis HOM05D003020 ORTHO05D003226 5.1e-15 85.9 249 31.7
Lj9A26T13 Lonicera japonica HOM05D003020 ORTHO05D003226 8.7e-15 85.1 236 34.3
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 8.7e-15 85.1 251 31.9
Eucgr.C02308 Eucalyptus grandis HOM05D003020 ORTHO05D003226 1.1e-14 84.7 255 32.2
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.5e-14 83.6 258 31.4
TPR.G5404 Trifolium pratense HOM05D003020 ORTHO05D003226 5.7e-14 82.4 268 31.0
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 2.1e-13 80.5 285 30.2
Lsat_1_v5_gn_5_84881 Lactuca sativa HOM05D003020 ORTHO05D003226 2.8e-13 80.1 246 32.1
ECA240G3460 Erigeron canadensis HOM05D003020 ORTHO05D003226 1.8e-12 77.4 243 29.6
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.9e-12 75.5 241 29.9
MSTRG.6214 Avicennia marina HOM05D003020 ORTHO05D003226 1.5e-11 74.3 198 32.3
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 2.6e-11 73.6 258 29.1
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 2.6e-11 73.6 254 29.5
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.4e-11 73.2 259 30.1
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.5e-11 72.8 242 29.3
MBI14_g17368_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 1.0e-10 71.6 247 30.4
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.7e-10 70.9 241 32.0
ECA234G3857 Erigeron canadensis HOM05D003020 ORTHO05D003226 8.5e-10 68.6 247 28.7
AUR62021300 Chenopodium quinoa HOM05D003020 ORTHO05D003226 1.9e-09 67.4 250 27.2
Ah.09g229890 Amaranthus hybridus HOM05D003020 ORTHO05D003226 2.5e-09 67.0 264 29.5
AUR62033218 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.5e-09 67.0 201 29.9
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.2e-08 64.7 276 28.6
Dinv42724 Davidia involucrata HOM05D003020 ORTHO05D003226 1.6e-08 64.3 238 30.7
Dinv43377 Davidia involucrata HOM05D003020 ORTHO05D003226 1.6e-08 64.3 238 30.7
HanXRQChr09g0244991 Helianthus annuus HOM05D003020 ORTHO05D003226 2.7e-08 63.5 281 28.1
MBI16_g42581_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D003226 4.6e-08 62.8 230 29.1
SGA_v2.0_scaffold17G07929 Striga asiatica HOM05D003020 ORTHO05D003226 2.3e-07 60.5 236 28.4
MBI16_g41356_MAGBIO Magnolia biondii HOM05D003020 ORTHO05D003226 3.9e-07 59.7 230 28.7
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 5.1e-07 59.3 256 26.2
Sed0002867 Sechium edule HOM05D003020 ORTHO05D003226 1.1e-06 58.2 204 28.4
HPP92_010749 Vanilla planifolia HOM05D023015 ORTHO05D003226 1.9e-06 57.4 73 39.7
CsaV3_5G025940 Cucumis sativus L. HOM05D003020 ORTHO05D003226 2.5e-06 57.0 202 26.2
Ah.14g083800 Amaranthus hybridus HOM05D003020 ORTHO05D003226 7.4e-06 55.5 156 31.4
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 7.4e-06 55.5 240 28.3
MELO3C025508.2 Cucumis melo HOM05D003020 ORTHO05D003226 9.7e-06 55.1 222 26.1


User provided reference genes

Program Settings