Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-74 283.1 131 100.0
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 5.4e-74 280.8 131 99.2
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 3.5e-65 251.5 131 90.1
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 1.2e-62 243.0 131 88.5
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 4.0e-61 238.0 131 85.5
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 3.4e-60 235.0 131 84.7
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 1.3e-59 233.0 131 84.7
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 3.4e-52 208.4 112 81.2
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 3.4e-52 208.4 112 81.2
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 3.2e-50 201.8 104 87.5
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.1e-45 186.8 131 66.4
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 5.2e-45 184.5 131 67.2
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 5.2e-45 184.5 131 67.2
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 5.8e-44 181.0 130 60.8
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 1.7e-43 179.5 131 64.9
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 6.4e-43 177.6 131 60.3
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 9.3e-42 173.7 138 64.5
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 1.2e-41 173.3 138 63.0
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.5e-39 165.6 131 60.3
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 3.1e-37 158.7 134 58.2
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.0e-36 156.0 131 56.5
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 1.7e-35 152.9 135 57.0
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 1.7e-35 152.9 135 52.6
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 9.3e-34 147.1 111 64.9
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.3e-34 147.1 133 54.1
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 6.0e-33 144.4 131 55.7
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.3e-32 142.5 124 55.6
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.6e-30 136.3 152 48.7
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 1.6e-30 136.3 125 56.0
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 3.6e-30 135.2 114 50.9
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 3.6e-30 135.2 114 50.9
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 3.6e-30 135.2 114 50.9
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 1.4e-29 133.3 131 47.3
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 1.4e-29 133.3 131 47.3
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 4.0e-29 131.7 132 47.7
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 2.0e-28 129.4 134 45.5
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 2.6e-28 129.0 131 45.0
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 4.5e-28 128.3 131 45.0
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 5.8e-28 127.9 131 45.0
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 7.6e-28 127.5 112 51.8
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 9.9e-28 127.1 132 44.7
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 9.9e-28 127.1 132 44.7
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-27 126.7 131 45.0
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 1.3e-27 126.7 131 45.0
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.3e-27 126.7 113 52.2
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.8e-27 125.2 131 45.0
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 8.4e-27 124.0 131 44.3
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 8.4e-27 124.0 131 44.3
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.4e-26 123.2 131 43.5
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 1.4e-26 123.2 132 48.5
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 1.9e-26 122.9 131 43.5
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 1.9e-26 122.9 131 43.5
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 2.4e-26 122.5 110 49.1
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 3.2e-26 122.1 110 49.1
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 3.2e-26 122.1 132 43.9
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 4.2e-26 121.7 132 47.7
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-24 116.7 131 42.7
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 1.3e-24 116.7 132 46.2
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.3e-24 115.9 113 46.0
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 3.0e-24 115.5 132 49.2
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 8.7e-24 114.0 124 42.7
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 8.7e-24 114.0 101 60.4
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.5e-23 113.2 131 46.6
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 1.9e-23 112.8 110 46.4
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.3e-22 110.2 131 43.5
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 6.2e-22 107.8 103 42.7
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 9.0e-21 104.0 132 43.2
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 2.0e-20 102.8 132 44.7
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 4.5e-20 101.7 132 43.9
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 4.5e-20 101.7 132 39.4
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 7.6e-20 100.9 131 38.2
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 7.6e-20 100.9 131 38.2
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 7.6e-20 100.9 127 45.7
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.6e-20 100.9 131 39.7
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 7.6e-20 100.9 125 38.4
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 1.7e-19 99.8 132 43.9
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 1.7e-19 99.8 137 38.7
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 2.2e-19 99.4 131 37.4
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 1.1e-18 97.1 108 43.5
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 5.5e-18 94.7 132 39.4
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 7.1e-18 94.4 102 46.1
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 3.5e-17 92.0 132 39.4
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 4.6e-17 91.7 132 39.4
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 3.0e-16 89.0 99 42.4
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 1.5e-15 86.7 133 35.3
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 2.5e-15 85.9 127 34.6
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 4.3e-15 85.1 126 35.7
Cpa.g.sc95.33 Carica papaya HOM05D009688 ORTHO05D005549 1.3e-14 83.6 111 43.2
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 9.0e-13 77.4 139 33.8
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 1.3e-11 73.6 134 30.6
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.7e-11 73.2 131 35.1
MD12G1050000 Malus domestica HOM05D009688 ORTHO05D005549 3.8e-11 72.0 130 33.1
Duzib168G0317 Durio zibethinus HOM05D009688 ORTHO05D005549 5.0e-11 71.6 115 35.7
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.1e-10 70.5 128 33.6
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 1.4e-10 70.1 111 31.5
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 4.2e-10 68.6 48 52.1
Gohir.A08G018500 Gossypium hirsutum HOM05D009688 ORTHO05D005549 4.6e-09 65.1 141 31.9
Potri.018G133200 Populus trichocarpa HOM05D009688 ORTHO05D005549 2.3e-08 62.8 122 32.8
Gorai.004G026200 Gossypium raimondii HOM05D009688 ORTHO05D005549 3.0e-08 62.4 141 31.2
Gohir.D08G029100 Gossypium hirsutum HOM05D009688 ORTHO05D005549 8.7e-08 60.8 141 31.2
BcaNung02067 Brassica carinata HOM05D006945 ORTHO05D005549 1.9e-07 59.7 41 61.0
BcaNung00512 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-06 57.0 98 33.7
Eucgr.C02234 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.8e-06 55.8 75 38.7
Eucgr.C02235 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.7e-06 55.5 75 38.7


User provided reference genes

Program Settings