Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-48 196.4 121 100.0
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 8.8e-47 190.3 121 96.7
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 3.4e-46 188.3 121 95.9
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.2e-28 127.1 126 51.6
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.7e-24 114.8 131 45.8
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 8.0e-24 114.0 131 46.6
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 6.8e-23 110.9 131 45.8
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.2e-22 110.2 130 44.6
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 4.4e-22 108.2 130 42.3
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 7.5e-22 107.5 133 42.9
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 9.8e-22 107.1 131 45.0
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 9.8e-22 107.1 131 45.0
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-20 103.6 132 43.9
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 1.4e-20 103.2 132 43.9
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 1.4e-20 103.2 133 42.9
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 7.0e-20 100.9 128 53.1
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.0e-20 100.9 113 45.1
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.2e-19 100.1 123 41.5
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 3.5e-19 98.6 138 42.8
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 6.0e-19 97.8 138 42.0
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-18 97.1 131 42.0
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 1.0e-18 97.1 128 42.2
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 1.0e-18 97.1 131 42.0
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.3e-18 96.7 148 38.5
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-18 96.7 128 41.4
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 5.0e-18 94.7 128 41.4
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.5e-17 93.2 126 41.3
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 2.5e-17 92.4 126 39.7
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.6e-17 91.3 102 47.1
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 2.8e-16 89.0 134 36.6
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 4.7e-16 88.2 127 38.6
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 6.2e-16 87.8 122 40.2
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 3.1e-15 85.5 123 33.3
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 4.0e-15 85.1 110 40.9
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 4.0e-15 85.1 110 40.9
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-14 83.6 123 34.1
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 1.2e-14 83.6 123 34.1
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 1.2e-14 83.6 123 49.6
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 3.4e-14 82.0 123 33.3
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 4.4e-14 81.6 123 33.3
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 4.4e-14 81.6 123 33.3
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 4.4e-14 81.6 123 33.3
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 7.5e-14 80.9 123 33.3
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 7.5e-14 80.9 123 33.3
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-13 80.1 123 32.5
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-13 80.1 123 32.5
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 1.3e-13 80.1 123 32.5
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 4.9e-13 78.2 113 41.6
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 4.9e-13 78.2 113 41.6
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 4.9e-13 78.2 123 32.5
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 4.9e-13 78.2 123 32.5
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 4.9e-13 78.2 113 41.6
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.9e-13 78.2 132 35.6
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.1e-12 77.0 121 39.7
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.4e-12 75.9 127 31.5
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 2.4e-12 75.9 131 39.7
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 2.4e-12 75.9 104 35.6
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 9.2e-12 73.9 98 34.7
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 9.2e-12 73.9 103 38.8
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 9.2e-12 73.9 122 32.0
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 2.7e-11 72.4 126 31.0
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.8e-11 70.9 121 33.1
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 1.0e-10 70.5 125 31.2
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 3.9e-10 68.6 123 35.8
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 5.1e-10 68.2 128 30.5
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 5.1e-10 68.2 128 30.5
BcaNung00512 Brassica carinata HOM05D006945 ORTHO05D005549 6.6e-10 67.8 80 70.0
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 8.6e-10 67.4 132 40.9
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 1.5e-09 66.6 130 30.8
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.9e-09 66.2 115 31.3
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 3.3e-09 65.5 109 40.4
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 4.3e-09 65.1 121 38.8
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 5.6e-09 64.7 64 53.1
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.6e-09 64.7 126 29.4
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.5e-09 63.9 104 29.8
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 1.6e-08 63.2 112 36.6
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.6e-08 63.2 121 35.5
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 3.6e-08 62.0 128 31.2
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.8e-07 59.7 124 30.6
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.3e-07 59.3 123 30.9
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 4.0e-07 58.5 109 39.4
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 4.4e-06 55.1 126 32.5
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 9.9e-06 53.9 34 55.9


User provided reference genes

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