Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 9.2e-87 323.6 166 100.0
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 9.2e-87 323.6 166 100.0
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 5.6e-76 287.7 167 89.2
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 5.6e-76 287.7 167 89.2
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 1.6e-67 259.6 165 81.8
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 6.4e-64 247.7 168 76.8
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.5e-60 235.7 173 74.6
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 4.7e-59 231.5 169 72.8
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.8e-58 229.6 167 74.3
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 2.0e-57 226.1 164 73.2
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 2.4e-55 219.2 144 77.1
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 2.8e-35 152.5 174 48.3
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 5.3e-34 148.3 183 48.6
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 2.0e-33 146.4 177 49.2
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 3.4e-33 145.6 177 49.2
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 3.4e-33 145.6 177 49.2
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 1.7e-32 143.3 176 48.9
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 2.9e-32 142.5 176 49.4
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 6.5e-32 141.4 177 48.6
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 3.2e-31 139.0 172 47.1
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 7.1e-31 137.9 177 46.3
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 3.5e-30 135.6 179 44.1
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 6.0e-30 134.8 145 49.7
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.0e-29 134.0 179 45.8
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.3e-27 127.1 155 46.5
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 6.2e-27 124.8 173 45.7
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.4e-26 123.6 153 42.5
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 1.8e-26 123.2 172 45.9
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 2.4e-26 122.9 172 45.9
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 2.4e-26 122.9 166 44.6
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 1.2e-25 120.6 173 44.5
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 7.6e-25 117.9 172 44.8
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 2.9e-24 115.9 134 45.5
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 1.1e-23 114.0 134 44.8
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 5.5e-23 111.7 129 43.4
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 1.0e-21 107.5 139 40.3
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 8.7e-21 104.4 131 41.2
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 1.1e-20 104.0 139 42.4
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 3.3e-20 102.4 128 40.6
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 9.7e-20 100.9 133 42.1
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 1.3e-19 100.5 146 37.7
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 1.3e-19 100.5 146 37.7
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 1.3e-19 100.5 128 39.8
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.3e-19 100.5 141 39.7
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 1.6e-19 100.1 148 37.8
AL7G23570 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.2e-19 99.8 160 38.1
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 2.8e-19 99.4 133 41.4
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.8e-19 99.4 141 39.0
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 4.8e-19 98.6 146 37.0
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 8.2e-19 97.8 132 38.6
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 1.1e-18 97.4 128 39.8
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 1.8e-18 96.7 147 35.4
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 5.3e-18 95.1 135 37.8
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 1.2e-17 94.0 128 36.7
Carub.0007s1174 Capsella rubella HOM05D005423 ORTHO05D006223 1.5e-17 93.6 157 38.2
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 2.0e-17 93.2 145 35.2
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 2.6e-17 92.8 103 43.7
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 2.6e-17 92.8 155 34.2
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 2.6e-17 92.8 147 33.3
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.4e-17 92.4 128 35.9
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 4.5e-17 92.0 133 33.8
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 5.9e-17 91.7 137 38.0
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 7.7e-17 91.3 132 38.6
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 1.0e-16 90.9 131 38.2
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 1.0e-16 90.9 137 38.0
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 1.3e-16 90.5 174 35.1
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 1.7e-16 90.1 137 35.8
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 2.2e-16 89.7 147 32.0
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 2.9e-16 89.4 141 31.9
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 5.0e-16 88.6 130 40.0
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 5.0e-16 88.6 148 35.8
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 6.5e-16 88.2 152 33.6
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 8.5e-16 87.8 140 32.1
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 1.4e-15 87.0 65 64.6
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 1.4e-15 87.0 130 37.7
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 2.5e-15 86.3 161 31.1
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 4.2e-15 85.5 65 61.5
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 4.2e-15 85.5 129 35.7
C07p57610 Brassica napus HOM05D005423 ORTHO05D006223 5.5e-15 85.1 134 38.1
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 5.5e-15 85.1 131 35.9
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 5.5e-15 85.1 136 32.4
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 7.2e-15 84.7 136 33.1
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.2e-14 84.0 136 33.8
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.2e-14 84.0 136 36.0
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 2.1e-14 83.2 136 36.0
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 2.7e-14 82.8 133 33.8
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 3.6e-14 82.4 92 51.1
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 4.6e-14 82.0 168 29.8
BolC7t46226H Brassica oleracea HOM05D005423 ORTHO05D006223 7.9e-14 81.3 136 38.2
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 7.9e-14 81.3 131 35.9
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.0e-13 80.9 136 31.6
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 1.0e-13 80.9 141 36.2
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.4e-13 80.5 93 39.8
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 1.4e-13 80.5 144 28.5
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 1.8e-13 80.1 142 31.7
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 3.0e-13 79.3 141 29.8
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 5.1e-13 78.6 160 31.9
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 6.7e-13 78.2 143 32.9
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 8.8e-13 77.8 87 39.1
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 1.1e-12 77.4 135 33.3
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.0e-12 76.6 135 34.1
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 2.0e-12 76.6 133 34.6
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 4.3e-12 75.5 100 40.0
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 4.3e-12 75.5 100 40.0
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 1.3e-11 73.9 82 40.2
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.7e-11 73.6 77 49.4
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 1.7e-11 73.6 178 29.2
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.1e-10 68.9 169 29.6
A09p38220 Brassica napus HOM05D005423 ORTHO05D006223 6.9e-10 68.2 53 62.3
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 7.7e-09 64.7 80 37.5
C09p04090 Brassica napus HOM05D005423 ORTHO05D006223 1.7e-08 63.5 50 58.0
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 3.2e-07 59.3 120 30.8
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 3.2e-07 59.3 90 36.7
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 6.1e-06 55.1 99 30.3


User provided reference genes

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