Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p56860 Brassica napus HOM05D009471 ORTHO05D011939 7.5e-39 163.3 79 100.0
BolC7t46164H Brassica oleracea HOM05D009471 ORTHO05D011939 2.2e-38 161.8 79 98.7
BraA09t41701Z Brassica rapa HOM05D009471 ORTHO05D011939 4.9e-38 160.6 79 97.5
A03p58890 Brassica napus HOM05D009471 ORTHO05D011939 1.1e-37 159.5 79 97.5
A09p63510 Brassica napus HOM05D009471 ORTHO05D011939 1.1e-37 159.5 79 96.2
BraA03t14949Z Brassica rapa HOM05D009471 ORTHO05D011939 1.1e-37 159.5 79 97.5
BcaB08g36157 Brassica carinata HOM05D009471 ORTHO05D011939 1.3e-35 152.5 79 92.4
BolC7t46163H Brassica oleracea HOM05D009471 ORTHO05D011939 1.4e-32 142.5 71 98.6
BolC7t46162H Brassica oleracea HOM05D009471 ORTHO05D011939 1.5e-26 122.5 79 77.2
Thhalv10026716m.g Eutrema salsugineum HOM05D009471 ORTHO05D011939 4.3e-26 120.9 79 77.2
A03p58880 Brassica napus HOM05D009471 ORTHO05D011939 5.6e-26 120.6 79 74.7
BraA03t14948Z Brassica rapa HOM05D009471 ORTHO05D011939 5.6e-26 120.6 79 74.7
AT4G13095 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 1.2e-20 102.8 80 65.0
C07p56850 Brassica napus HOM05D009471 ORTHO05D011939 1.6e-20 102.4 61 78.7
CARHR237030 Cardamine hirsuta HOM05D009471 ORTHO05D011939 2.7e-20 101.7 80 66.2
AT4G29285 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 3.5e-20 101.3 79 64.6
Carub.0007s1128 Capsella rubella HOM05D009471 ORTHO05D011939 4.6e-20 100.9 79 62.0
AL7G23160 Arabidopsis lyrata HOM05D009471 ORTHO05D011939 2.5e-18 95.1 67 67.2
BolC6t38591H Brassica oleracea HOM05D009471 ORTHO05D011939 5.8e-15 84.0 79 57.0
C06p34890 Brassica napus HOM05D009471 ORTHO05D011939 1.7e-14 82.4 79 55.7
A07p30190 Brassica napus HOM05D009471 ORTHO05D011939 6.4e-14 80.5 79 54.4
Carub.0007s1132 Capsella rubella HOM05D009471 ORTHO05D011939 8.4e-14 80.1 80 51.2
BraA07t30656Z Brassica rapa HOM05D009471 ORTHO05D011939 2.4e-13 78.6 79 53.2
C06p34930 Brassica napus HOM05D009471 ORTHO05D011939 3.2e-13 78.2 79 54.4
Aa31LG2G21160 Aethionema arabicum HOM05D009471 ORTHO05D011939 4.3e-10 67.8 85 47.1
AL7G23140 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 2.8e-09 65.1 81 42.0
AL7G34020 Arabidopsis lyrata HOM05D009471 ORTHO05D038604 1.1e-08 63.2 80 45.0
CARHR237040 Cardamine hirsuta HOM05D009471 ORTHO05D011939 3.1e-08 61.6 81 49.4
AT4G19905 Arabidopsis thaliana HOM05D009471 ORTHO05D038604 9.0e-08 60.1 80 43.8
AT4G29300 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 3.4e-07 58.2 81 40.7
CARHR237050 Cardamine hirsuta HOM05D008236 ORTHO05D010394 3.4e-07 58.2 82 39.0
AT4G29280 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.5e-07 57.8 80 36.2
AT4G29283 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.5e-07 57.8 79 36.7
CARHR237070 Cardamine hirsuta HOM05D008236 ORTHO05D010394 4.5e-07 57.8 81 39.5
AT4G29305 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 5.8e-07 57.4 81 39.5
CARHR237060 Cardamine hirsuta HOM05D008236 ORTHO05D010394 5.8e-07 57.4 81 40.7
Sopen10g029560 Solanum pennellii HOM05D010058 ORTHO05D010053 1.3e-06 56.2 79 45.6
AT4G09153 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 2.9e-06 55.1 80 42.5
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 2.9e-06 55.1 81 39.5
CARHR237090 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.9e-06 55.1 81 39.5
Thhalv10026870m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 3.8e-06 54.7 81 39.5
AL7G23150 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.9e-06 54.3 81 39.5
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 6.4e-06 53.9 80 38.8


User provided reference genes

Program Settings