Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p56460 Brassica napus HOM05D006031 ORTHO05D007417 2.2e-114 415.6 209 100.0
BolC7t46125H Brassica oleracea HOM05D006031 ORTHO05D007417 6.5e-114 414.1 209 99.5
BraA01t00856Z Brassica rapa HOM05D006031 ORTHO05D007417 5.5e-113 411.0 209 98.1
BcaC09g51657 Brassica carinata HOM05D006031 ORTHO05D007417 1.6e-112 409.5 209 97.1
BolC1t01025H Brassica oleracea HOM05D006031 ORTHO05D007417 1.6e-112 409.5 209 97.1
BraA03t14904Z Brassica rapa HOM05D006031 ORTHO05D007417 1.6e-112 409.5 209 97.6
A03p58440 Brassica napus HOM05D006031 ORTHO05D007417 4.7e-112 407.9 209 97.1
BcaNung01361 Brassica carinata HOM05D006031 ORTHO05D007417 1.0e-111 406.8 208 96.6
C01p10630 Brassica napus HOM05D006031 ORTHO05D007417 1.0e-111 406.8 209 96.7
A01p09080 Brassica napus HOM05D006031 ORTHO05D007417 3.9e-111 404.8 209 96.2
Carub.0007s1181 Capsella rubella HOM05D006031 ORTHO05D007417 4.4e-110 401.4 209 95.2
AT4G28830 Arabidopsis thaliana HOM05D006031 ORTHO05D007417 7.4e-110 400.6 209 95.2
BcaC06g32602 Brassica carinata HOM05D006031 ORTHO05D007417 7.4e-110 400.6 209 95.2
AL7G23660 Arabidopsis lyrata HOM05D006031 ORTHO05D007417 6.3e-109 397.5 209 94.7
Sp7g26830 Schrenkiella parvula HOM05D006031 ORTHO05D007417 9.1e-108 393.7 209 93.3
Thhalv10026253m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 1.5e-107 392.9 207 93.2
Aa31LG2G21560 Aethionema arabicum HOM05D006031 ORTHO05D007417 2.2e-106 389.0 209 91.4
THA.LOC104804018 Tarenaya hassleriana HOM05D006031 ORTHO05D007417 1.3e-98 363.2 205 86.8
QL02p044744 Quercus lobata HOM05D006031 ORTHO05D007417 1.3e-93 346.7 208 81.2
TWI63G0954 Tripterygium wilfordii HOM05D006031 ORTHO05D007417 2.8e-93 345.5 208 79.3
COL.COLO4_34809 Corchorus olitorius HOM05D006031 ORTHO05D007417 1.1e-92 343.6 209 78.5
PGR102G2811 Punica granatum HOM05D006031 ORTHO05D007417 1.1e-92 343.6 207 78.7
Atru.chr7.1388 Acer truncatum HOM05D006031 ORTHO05D007417 1.6e-91 339.7 208 77.4
Eucgr.C03802 Eucalyptus grandis HOM05D006031 ORTHO05D007417 2.0e-91 339.3 206 79.1
CANSAT56G1289 Cannabis sativa HOM05D006031 ORTHO05D007417 3.5e-91 338.6 206 79.1
Actinidia20400 Actinidia chinensis HOM05D006031 ORTHO05D007417 4.5e-91 338.2 207 77.3
RcHm_v2.0_Chr2g0091271 Rosa chinensis HOM05D006031 ORTHO05D007417 5.9e-91 337.8 206 78.6
Lsat_1_v5_gn_4_6541 Lactuca sativa HOM05D006031 ORTHO05D007417 1.0e-90 337.0 206 77.7
Ca_25548_v3 Cicer arietinum L. HOM05D006031 ORTHO05D007417 1.3e-90 336.7 205 78.5
HanXRQChr17g0570151 Helianthus annuus HOM05D006031 ORTHO05D007417 1.7e-90 336.3 206 78.6
Cpa.g.sc12.30 Carica papaya HOM05D006031 ORTHO05D007417 2.2e-90 335.9 209 76.1
Glyma.01G145300 Glycine max HOM05D006031 ORTHO05D007417 2.2e-90 335.9 205 79.0
GSVIVG01015348001 Vitis vinifera HOM05D006031 ORTHO05D007417 3.8e-90 335.1 208 76.4
Migut.K00493 Erythranthe guttata HOM05D006031 ORTHO05D007417 6.5e-90 334.3 206 76.7
Sc18g0001360 Simmondsia chinensis HOM05D006031 ORTHO05D007417 6.5e-90 334.3 205 76.1
Gorai.010G073700 Gossypium raimondii HOM05D006031 ORTHO05D007417 8.5e-90 334.0 208 76.9
Sabra18G0072100 Salix brachista HOM05D006031 ORTHO05D007417 8.5e-90 334.0 208 75.0
ECA234G3380 Erigeron canadensis HOM05D006031 ORTHO05D007417 1.1e-89 333.6 205 79.0
Gohir.A06G064600 Gossypium hirsutum HOM05D006031 ORTHO05D007417 1.1e-89 333.6 208 76.4
Thecc.09G105700 Theobroma cacao HOM05D006031 ORTHO05D007417 1.1e-89 333.6 208 76.4
CiPaw.03G228000 Carya illinoinensis HOM05D006031 ORTHO05D007417 1.5e-89 333.2 208 76.4
TPR.G34905 Trifolium pratense HOM05D006031 ORTHO05D007417 1.5e-89 333.2 208 76.4
AUR62021455 Chenopodium quinoa HOM05D006031 ORTHO05D007417 1.9e-89 332.8 205 76.6
PSO566G0179 Papaver somniferum HOM05D006031 ORTHO05D007417 1.9e-89 332.8 208 76.9
PSO782G0755 Papaver somniferum HOM05D006031 ORTHO05D007417 2.5e-89 332.4 208 76.9
Manes.03G024000 Manihot esculenta HOM05D006031 ORTHO05D007417 3.2e-89 332.0 208 76.4
arahy.Tifrunner.gnm1.ann1.4UU729 Arachis hypogaea HOM05D006031 ORTHO05D007417 4.2e-89 331.6 205 78.0
arahy.Tifrunner.gnm1.ann1.P4D2XC Arachis hypogaea HOM05D006031 ORTHO05D007417 4.2e-89 331.6 205 78.0
MELO3C004569.2 Cucumis melo HOM05D006031 ORTHO05D007417 4.2e-89 331.6 208 76.4
Dinv41637 Davidia involucrata HOM05D006031 ORTHO05D007417 4.2e-89 331.6 209 75.6
Hma1.2p1_0945F.1_g240050 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 4.2e-89 331.6 208 74.5
Gohir.D06G063200 Gossypium hirsutum HOM05D006031 ORTHO05D007417 5.5e-89 331.3 208 76.4
Lalb_Chr22g0352651 Lupinus albus HOM05D006031 ORTHO05D007417 5.5e-89 331.3 205 77.1
Potri.018G083800 Populus trichocarpa HOM05D006031 ORTHO05D007417 5.5e-89 331.3 208 74.5
Phvul.004G168000 Phaseolus vulgaris HOM05D006031 ORTHO05D007417 7.2e-89 330.9 208 75.5
EL10Ac8g18430 Beta vulgaris HOM05D006031 ORTHO05D007417 2.1e-88 329.3 205 75.1
CARHR236620 Cardamine hirsuta HOM05D006031 ORTHO05D007417 2.1e-88 329.3 209 80.4
Ciclev10009448m.g Citrus clementina HOM05D006031 ORTHO05D007417 2.7e-88 328.9 211 76.8
MD02G1057400 Malus domestica HOM05D006031 ORTHO05D007417 2.7e-88 328.9 206 77.7
CAN.G478.5 Capsicum annuum HOM05D006031 ORTHO05D007417 3.6e-88 328.6 207 75.4
VMungo0464G0135 Vigna mungo HOM05D006031 ORTHO05D007417 3.6e-88 328.6 205 76.6
Medtr1g035260 Medicago truncatula HOM05D006031 ORTHO05D007417 4.7e-88 328.2 205 76.1
CsaV3_2G002120 Cucumis sativus L. HOM05D006031 ORTHO05D007417 6.1e-88 327.8 208 76.0
FAN23G2797 Fragaria x ananassa HOM05D006031 ORTHO05D007417 8.0e-88 327.4 206 77.2
Aqoxy7G01527 Aquilegia oxysepala HOM05D006031 ORTHO05D007417 1.0e-87 327.0 208 75.0
Nitab4.5_0000952g0030 Nicotiana tabacum HOM05D006031 ORTHO05D007417 1.0e-87 327.0 207 74.9
Sopen12g002000 Solanum pennellii HOM05D006031 ORTHO05D007417 1.8e-87 326.2 207 74.9
Nitab4.5_0000010g0020 Nicotiana tabacum HOM05D006031 ORTHO05D007417 2.3e-87 325.9 207 74.9
Hund26230 Selenicereus undatus HOM05D006031 ORTHO05D007417 2.3e-87 325.9 205 74.1
Solyc12g006030.2 Solanum lycopersicum HOM05D006031 ORTHO05D007417 2.3e-87 325.9 207 74.9
FvH4_1g05640 Fragaria vesca HOM05D006031 ORTHO05D007417 3.0e-87 325.5 206 76.7
Cc06_g10050 Coffea canephora HOM05D006031 ORTHO05D007417 4.0e-87 325.1 208 73.1
FAN26G0948 Fragaria x ananassa HOM05D006031 ORTHO05D007417 5.2e-87 324.7 206 76.2
FAN26G3395 Fragaria x ananassa HOM05D006031 ORTHO05D007417 5.2e-87 324.7 206 76.2
SalBow3G0984 Salvia bowleyana HOM05D006031 ORTHO05D007417 6.8e-87 324.3 213 73.2
Nn2g11655 Nelumbo nucifera HOM05D006031 ORTHO05D007417 3.4e-86 322.0 205 75.6
Os06g0162600 Oryza sativa ssp. japonica HOM05D006031 ORTHO05D007417 4.4e-86 321.6 206 76.2
TAR624G0502 Trochodendron aralioides HOM05D006031 ORTHO05D007417 7.5e-86 320.9 205 74.6
ClCG11G002340 Citrullus lanatus HOM05D006031 ORTHO05D007417 1.3e-85 320.1 227 70.5
Peaxi162Scf00539g00717 Petunia axillaris HOM05D006031 ORTHO05D007417 1.3e-85 320.1 207 73.9
MBI04_g14932_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 2.8e-85 318.9 205 72.7
CDE02G2180 Ceratophyllum demersum HOM05D006031 ORTHO05D007417 1.8e-84 316.2 215 70.7
AUR62010942 Chenopodium quinoa HOM05D006031 ORTHO05D007417 1.8e-84 316.2 205 73.7
ATR0315G117 Amborella trichopoda HOM05D006031 ORTHO05D007417 4.1e-84 315.1 205 73.2
Zm00001eb271370 Zea mays HOM05D006031 ORTHO05D007417 2.7e-83 312.4 205 75.6
Mapoly0136s0020 Marchantia polymorpha HOM05D006031 ORTHO05D007417 1.7e-82 309.7 203 73.4
HPP92_005270 Vanilla planifolia HOM05D006031 ORTHO05D007417 2.9e-82 308.9 210 71.4
Actinidia09434 Actinidia chinensis HOM05D006031 ORTHO05D007417 2.5e-81 305.8 209 71.3
Ah.09g230920 Amaranthus hybridus HOM05D006031 ORTHO05D007417 2.5e-81 305.8 186 76.3
CSS0004856 Camellia sinensis var. sinensis HOM05D006031 ORTHO05D007417 9.5e-81 303.9 208 70.2
Pp3c6_12910 Physcomitrium patens HOM05D006031 ORTHO05D007417 1.5e-78 296.6 203 71.9
Prupe.7G225500 Prunus persica HOM05D006031 ORTHO05D007417 2.2e-77 292.7 178 79.8
SGA_v2.0_scaffold387G50523 Striga asiatica HOM05D006031 ORTHO05D007417 2.2e-77 292.7 206 68.4
AagrBONN_evm.TU.Sc2ySwM_228.3645 Anthoceros agrestis HOM05D006031 ORTHO05D007417 3.7e-77 292.0 203 69.0
vmacro10877 Vaccinium macrocarpon HOM05D006031 ORTHO05D007417 2.4e-76 289.3 207 68.6
unitig_62.g23476 Utricularia gibba HOM05D006031 ORTHO05D007417 1.2e-75 287.0 213 65.3
Duzib150G0325 Durio zibethinus HOM05D006031 ORTHO05D007417 4.5e-75 285.0 208 68.8
SMO164G0018 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 5.9e-75 284.6 203 68.5
Cfa003225 Carpinus fangiana HOM05D006031 ORTHO05D007417 1.0e-74 283.9 208 68.3
SMO304G0145 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 3.9e-74 282.0 203 68.0
ClCG06G015420 Citrullus lanatus HOM05D006031 ORTHO05D007417 2.2e-69 266.2 170 75.3
Hma1.2p1_0945F.1_g240060 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 7.8e-67 257.7 166 71.7
Dinv41633 Davidia involucrata HOM05D006031 ORTHO05D007417 3.0e-66 255.8 170 71.2
Haze_25783 Corylus avellana HOM05D006031 ORTHO05D007417 9.5e-65 250.8 189 65.6
MSTRG.26365 Avicennia marina HOM05D006031 ORTHO05D007417 1.1e-63 247.3 159 74.8
Rhsim05G0043800 Rhododendron simsii HOM05D006031 ORTHO05D000070 8.9e-63 244.2 251 52.2
Lj2g0026722 Lotus japonicus HOM05D006031 ORTHO05D007417 1.5e-62 243.4 157 75.2
Psat1g044640 Pisum sativum HOM05D006031 ORTHO05D007417 7.5e-62 241.1 157 74.5
Cre08.g384700 Chlamydomonas reinhardtii HOM05D006031 ORTHO05D007417 2.8e-56 222.6 212 54.7
PGSC0003DMG400013889 Solanum tuberosum HOM05D000011 ORTHO05D007417 5.2e-55 218.4 191 57.1
Sed0012983 Sechium edule HOM05D006031 ORTHO05D007417 6.8e-55 218.0 135 77.8
PRCOL_00003743 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 6.6e-50 201.4 208 50.0
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 1.6e-48 196.8 182 55.5
arahy.Tifrunner.gnm1.ann1.PEIA6U Arachis hypogaea HOM05D006031 ORTHO05D007417 6.8e-47 191.4 152 63.2
Zm00001eb271350 Zea mays HOM05D006031 ORTHO05D007417 1.1e-44 184.1 123 74.0
Zm00001eb442390 Zea mays HOM05D006031 ORTHO05D007417 1.1e-44 184.1 123 74.0
MCO05G480 Micromonas commoda HOM05D006031 ORTHO05D007417 2.7e-43 179.5 210 48.1
DCAR_012059 Daucus carota HOM05D006031 ORTHO05D007417 4.8e-40 168.7 142 62.0
Haze_26211 Corylus avellana HOM05D006031 ORTHO05D007417 9.9e-38 161.0 223 41.3
Haze_27462 Corylus avellana HOM05D006031 ORTHO05D007417 9.9e-38 161.0 223 41.3
Lj4A429T15 Lonicera japonica HOM05D006031 ORTHO05D007417 1.3e-34 150.6 95 75.8
PRCOL_00005480 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 2.7e-27 126.3 196 36.7
BcaC09g51665 Brassica carinata HOM05D006031 ORTHO05D007417 1.3e-26 124.0 89 71.9
SEGI_07643 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 3.5e-19 99.4 65 67.7
Lsat_1_v5_gn_8_38160 Lactuca sativa HOM05D006031 ORTHO05D007417 1.0e-18 97.8 104 50.0
Zm00001eb271390 Zea mays HOM05D006031 ORTHO05D007417 6.2e-16 88.6 53 81.1
AUR62033208 Chenopodium quinoa HOM05D003603 ORTHO05D004186 1.8e-15 87.0 52 75.0
AUR62044225 Chenopodium quinoa HOM05D003603 ORTHO05D004186 1.8e-15 87.0 51 76.5
Glyma.09G193200 Glycine max HOM05D006031 ORTHO05D007417 1.8e-15 87.0 77 58.4
VMungo0464G0776 Vigna mungo HOM05D000002 ORTHO05D000001 5.0e-13 79.0 65 61.5
Medtr6g087210 Medicago truncatula HOM05D006031 ORTHO05D007417 1.8e-10 70.5 54 63.0
SEGI_21752 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 5.1e-10 68.9 57 57.9
Thhalv10002738m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 1.1e-09 67.8 39 84.6
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-09 67.8 47 70.2
MBI06_g04307_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 3.7e-08 62.8 134 36.6
Lsat_1_v5_gn_2_108580 Lactuca sativa HOM05D006031 ORTHO05D007417 6.9e-07 58.5 39 76.9
COL.COLO4_34793 Corchorus olitorius HOM05D006031 ORTHO05D007417 3.4e-06 56.2 34 76.5


User provided reference genes

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