Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p56170 Brassica napus HOM05D004709 ORTHO05D005669 5.6e-43 177.2 88 100.0
BraA02t09093Z Brassica rapa HOM05D004709 ORTHO05D005669 1.4e-41 172.6 88 98.9
A02p41520 Brassica napus HOM05D004709 ORTHO05D005669 5.3e-41 170.6 88 97.7
BcaC01g01257 Brassica carinata HOM05D004709 ORTHO05D005669 1.5e-40 169.1 88 96.6
BcaC03g18433 Brassica carinata HOM05D004709 ORTHO05D005669 1.5e-40 169.1 88 96.6
C02p63420 Brassica napus HOM05D004709 ORTHO05D005669 1.5e-40 169.1 88 96.6
BolC2t12409H Brassica oleracea HOM05D004709 ORTHO05D005669 1.5e-40 169.1 88 96.6
BolC3t21308H Brassica oleracea HOM05D004709 ORTHO05D005669 1.5e-40 169.1 88 96.6
BcaC07g40932 Brassica carinata HOM05D004709 ORTHO05D005669 3.4e-40 167.9 88 95.5
C08p39260 Brassica napus HOM05D004709 ORTHO05D005669 3.4e-40 167.9 88 95.5
A03p02360 Brassica napus HOM05D004709 ORTHO05D005669 1.7e-39 165.6 88 94.3
BolC6t39173H Brassica oleracea HOM05D004709 ORTHO05D005669 4.9e-39 164.1 88 93.2
C03p89860 Brassica napus HOM05D004709 ORTHO05D005669 6.4e-39 163.7 88 93.2
C02p61460 Brassica napus HOM05D004709 ORTHO05D005669 1.4e-38 162.5 88 94.3
C06p42660 Brassica napus HOM05D004709 ORTHO05D005669 1.4e-38 162.5 88 93.2
BolC2t12197H Brassica oleracea HOM05D004709 ORTHO05D005669 1.4e-38 162.5 88 94.3
Sp2g24450 Schrenkiella parvula HOM05D004709 ORTHO05D005669 6.7e-36 153.7 88 87.5
A03p46850 Brassica napus HOM05D004709 ORTHO05D005669 4.3e-35 151.0 88 86.4
BraA03t13805Z Brassica rapa HOM05D004709 ORTHO05D005669 3.7e-34 147.9 88 85.2
BcaC06g33217 Brassica carinata HOM05D004709 ORTHO05D005669 8.1e-34 146.7 86 86.0
Thhalv10005205m.g Eutrema salsugineum HOM05D004709 ORTHO05D005669 8.1e-34 146.7 88 85.2
AL8G37880 Arabidopsis lyrata HOM05D004709 ORTHO05D005669 2.4e-33 145.2 88 81.8
C07p44900 Brassica napus HOM05D004709 ORTHO05D005669 2.4e-33 145.2 88 84.1
BolC7t45013H Brassica oleracea HOM05D004709 ORTHO05D005669 2.4e-33 145.2 88 84.1
AT5G61220 Arabidopsis thaliana HOM05D004709 ORTHO05D005669 3.1e-33 144.8 88 81.8
BcaC06g33172 Brassica carinata HOM05D004709 ORTHO05D005669 6.4e-31 137.1 88 81.8
Carub.0008s2188 Capsella rubella HOM05D004709 ORTHO05D005669 8.4e-31 136.7 88 76.1
CARHR274970 Cardamine hirsuta HOM05D004709 ORTHO05D005669 1.9e-30 135.6 88 77.3
BcaC03g15765 Brassica carinata HOM05D004709 ORTHO05D005669 6.9e-25 117.1 88 76.1
C05p13760 Brassica napus HOM05D004709 ORTHO05D005669 5.8e-24 114.0 76 78.9
BolC5t30114H Brassica oleracea HOM05D004709 ORTHO05D005669 5.8e-24 114.0 76 78.9
BcaC05g25635 Brassica carinata HOM05D004709 ORTHO05D005669 7.6e-24 113.6 76 78.9
Aa31LG11G2140 Aethionema arabicum HOM05D004709 ORTHO05D005669 3.8e-23 111.3 85 64.7
BraA07t31299Z Brassica rapa HOM05D004709 ORTHO05D005669 3.8e-23 111.3 76 76.3
Carub.0006s3376 Capsella rubella HOM05D004709 ORTHO05D005669 8.4e-23 110.2 83 68.7
THA.LOC104801321 Tarenaya hassleriana HOM05D004709 ORTHO05D005669 6.1e-21 104.0 85 60.0
Nitab4.5_0002881g0040 Nicotiana tabacum HOM05D004709 ORTHO05D005669 1.3e-20 102.8 81 59.3
Nitab4.5_0004511g0070 Nicotiana tabacum HOM05D004709 ORTHO05D005669 1.8e-20 102.4 81 59.3
CAN.G479.31 Capsicum annuum HOM05D004709 ORTHO05D005669 1.9e-19 99.0 80 58.8
Cpa.g.sc94.6 Carica papaya HOM05D004709 ORTHO05D005669 3.3e-19 98.2 82 58.5
ClCG04G011960 Citrullus lanatus HOM05D004709 ORTHO05D005669 3.3e-19 98.2 83 57.8
Solyc03g115490.1 Solanum lycopersicum HOM05D004709 ORTHO05D005669 3.3e-19 98.2 79 57.0
Sopen03g034490 Solanum pennellii HOM05D004709 ORTHO05D005669 3.3e-19 98.2 79 57.0
PGSC0003DMG400024653 Solanum tuberosum HOM05D004709 ORTHO05D005669 3.3e-19 98.2 79 57.0
PSO478G1650 Papaver somniferum HOM05D004709 ORTHO05D005669 4.3e-19 97.8 81 55.6
MBI16_g16369_MAGBIO Magnolia biondii HOM05D004709 ORTHO05D005669 5.7e-19 97.4 81 54.3
ECA246G5156 Erigeron canadensis HOM05D004709 ORTHO05D005669 7.4e-19 97.1 80 57.5
BraA10t43343Z Brassica rapa HOM05D004709 ORTHO05D005669 1.3e-18 96.3 52 94.2
Ah.10g032000 Amaranthus hybridus HOM05D004709 ORTHO05D005669 2.2e-18 95.5 85 54.1
Ciclev10022528m.g Citrus clementina HOM05D004709 ORTHO05D005669 2.2e-18 95.5 80 56.2
MELO3C017207.2 Cucumis melo HOM05D004709 ORTHO05D005669 2.2e-18 95.5 80 56.2
EL10Ac2g03100 Beta vulgaris HOM05D004709 ORTHO05D005669 2.8e-18 95.1 84 54.8
Gohir.A12G180600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 2.8e-18 95.1 80 57.5
TWI18G0167 Tripterygium wilfordii HOM05D004709 ORTHO05D005669 3.7e-18 94.7 82 54.9
Gohir.D12G183300 Gossypium hirsutum HOM05D004709 ORTHO05D005669 4.8e-18 94.4 80 57.5
TAR622G0455 Trochodendron aralioides HOM05D004709 ORTHO05D005669 4.8e-18 94.4 82 54.9
BcaC07g40820 Brassica carinata HOM05D004709 ORTHO05D005669 6.3e-18 94.0 48 100.0
C08p38130 Brassica napus HOM05D004709 ORTHO05D005669 6.3e-18 94.0 48 100.0
BolC8t51388H Brassica oleracea HOM05D004709 ORTHO05D005669 6.3e-18 94.0 48 100.0
COL.COLO4_36893 Corchorus olitorius HOM05D004709 ORTHO05D005669 6.3e-18 94.0 80 57.5
Sc10g0003220 Simmondsia chinensis HOM05D004709 ORTHO05D005669 8.2e-18 93.6 80 56.2
Aqoxy3G03572 Aquilegia oxysepala HOM05D004709 ORTHO05D005669 1.1e-17 93.2 78 55.1
CiPaw.11G049800 Carya illinoinensis HOM05D004709 ORTHO05D005669 1.1e-17 93.2 82 53.7
AUR62018162 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.1e-17 93.2 81 53.1
AUR62042435 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.1e-17 93.2 81 53.1
AUR62008495 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.4e-17 92.8 84 51.2
MELO3C002013.2 Cucumis melo HOM05D004709 ORTHO05D005669 1.4e-17 92.8 79 55.7
Thecc.03G097000 Theobroma cacao HOM05D004709 ORTHO05D005669 1.4e-17 92.8 80 57.5
TAR371G0159 Trochodendron aralioides HOM05D004709 ORTHO05D005669 1.4e-17 92.8 80 56.2
ClCG06G015840 Citrullus lanatus HOM05D004709 ORTHO05D005669 1.8e-17 92.4 80 56.2
Sed0019301 Sechium edule HOM05D004709 ORTHO05D005669 1.8e-17 92.4 81 55.6
Lsat_1_v5_gn_5_22101 Lactuca sativa HOM05D004709 ORTHO05D005669 2.4e-17 92.0 80 53.8
Nn4g23362 Nelumbo nucifera HOM05D004709 ORTHO05D005669 2.4e-17 92.0 82 51.2
COL.COLO4_31014 Corchorus olitorius HOM05D004709 ORTHO05D005669 3.1e-17 91.7 80 56.2
HanXRQChr05g0157171 Helianthus annuus HOM05D004709 ORTHO05D005669 3.1e-17 91.7 82 50.0
Potri.009G079800 Populus trichocarpa HOM05D004709 ORTHO05D005669 4.1e-17 91.3 82 51.2
Sed0002201 Sechium edule HOM05D004709 ORTHO05D005669 4.1e-17 91.3 81 54.3
Sed0023667 Sechium edule HOM05D004709 ORTHO05D005669 4.1e-17 91.3 81 55.6
Duzib205G1485 Durio zibethinus HOM05D004709 ORTHO05D005669 5.3e-17 90.9 82 53.7
MD09G1062400 Malus domestica HOM05D004709 ORTHO05D005669 5.3e-17 90.9 81 50.6
Os08g0239000 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 5.3e-17 90.9 85 54.1
QL10p018658 Quercus lobata HOM05D004709 ORTHO05D005669 5.3e-17 90.9 82 52.4
Zm00001eb398330 Zea mays HOM05D004709 ORTHO05D005669 5.3e-17 90.9 85 52.9
CsaV3_1G005830 Cucumis sativus L. HOM05D004709 ORTHO05D005669 6.9e-17 90.5 79 54.4
Lalb_Chr10g0093091 Lupinus albus HOM05D004709 ORTHO05D005669 6.9e-17 90.5 82 53.7
Rhsim08G0148900 Rhododendron simsii HOM05D004709 ORTHO05D005669 6.9e-17 90.5 81 53.1
Gohir.D03G095600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 9.0e-17 90.1 78 56.4
Gorai.003G100300 Gossypium raimondii HOM05D004709 ORTHO05D005669 9.0e-17 90.1 78 56.4
Nn7g35950 Nelumbo nucifera HOM05D004709 ORTHO05D005669 9.0e-17 90.1 85 49.4
PGR083G1512 Punica granatum HOM05D004709 ORTHO05D005669 9.0e-17 90.1 82 54.9
CARHR099960 Cardamine hirsuta HOM05D004709 ORTHO05D005669 1.2e-16 89.7 66 71.2
HanXRQChr04g0101451 Helianthus annuus HOM05D004709 ORTHO05D005669 1.2e-16 89.7 80 55.0
Lsat_1_v5_gn_1_13721 Lactuca sativa HOM05D004709 ORTHO05D005669 1.2e-16 89.7 79 55.7
Os10g0406600 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 1.2e-16 89.7 85 54.1
Prupe.3G258000 Prunus persica HOM05D004709 ORTHO05D005669 1.2e-16 89.7 82 50.0
Gorai.008G196600 Gossypium raimondii HOM05D004709 ORTHO05D005669 1.5e-16 89.4 80 55.0
Glyma.08G242600 Glycine max HOM05D004709 ORTHO05D005669 2.0e-16 89.0 80 55.0
RcHm_v2.0_Chr2g0166371 Rosa chinensis HOM05D004709 ORTHO05D005669 2.0e-16 89.0 83 49.4
Duzib084G0757 Durio zibethinus HOM05D004709 ORTHO05D005669 3.4e-16 88.2 80 56.2
Migut.D01673 Erythranthe guttata HOM05D004709 ORTHO05D005669 3.4e-16 88.2 81 51.9
Peaxi162Scf00106g00072 Petunia axillaris HOM05D004709 ORTHO05D005669 3.4e-16 88.2 79 53.2
Atru.chr2.2420 Acer truncatum HOM05D004709 ORTHO05D005669 4.5e-16 87.8 79 54.4
Eucgr.B00568 Eucalyptus grandis HOM05D004709 ORTHO05D005669 4.5e-16 87.8 82 51.2
SHI27018 Sapria himalayana HOM05D004709 ORTHO05D005669 4.5e-16 87.8 82 47.6
Cfa019297 Carpinus fangiana HOM05D004709 ORTHO05D005669 5.9e-16 87.4 82 51.2
Gohir.A03G069100 Gossypium hirsutum HOM05D004709 ORTHO05D005669 5.9e-16 87.4 78 55.1
Manes.06G087400 Manihot esculenta HOM05D004709 ORTHO05D005669 5.9e-16 87.4 82 50.0
Glyma.18G264800 Glycine max HOM05D004709 ORTHO05D005669 7.7e-16 87.0 80 53.8
Manes.14G083600 Manihot esculenta HOM05D004709 ORTHO05D005669 7.7e-16 87.0 82 50.0
Nn3g17388 Nelumbo nucifera HOM05D004709 ORTHO05D005669 7.7e-16 87.0 82 50.0
Phvul.008G035200 Phaseolus vulgaris HOM05D004709 ORTHO05D005669 7.7e-16 87.0 80 51.2
ATR0064G063 Amborella trichopoda HOM05D004709 ORTHO05D005669 1.0e-15 86.7 80 50.0
FvH4_6g47340 Fragaria vesca HOM05D004709 ORTHO05D005669 1.0e-15 86.7 82 48.8
FAN14G4554 Fragaria x ananassa HOM05D004709 ORTHO05D005669 1.0e-15 86.7 82 48.8
Pp3c1_9190 Physcomitrium patens HOM05D004709 ORTHO05D005669 1.0e-15 86.7 77 54.5
CANSAT56G2672 Cannabis sativa HOM05D004709 ORTHO05D005669 1.7e-15 85.9 81 49.4
HanXRQChr17g0545301 Helianthus annuus HOM05D004709 ORTHO05D005669 1.7e-15 85.9 80 52.5
MD00G1156500 Malus domestica HOM05D004709 ORTHO05D005669 2.2e-15 85.5 82 45.1
Zm00001eb011200 Zea mays HOM05D004709 ORTHO05D005669 2.9e-15 85.1 85 49.4
FAN09G0998 Fragaria x ananassa HOM05D004709 ORTHO05D005669 5.0e-15 84.3 82 48.8
Psat3g200920 Pisum sativum HOM05D004709 ORTHO05D005669 6.5e-15 84.0 82 47.6
SalBow5G3312 Salvia bowleyana HOM05D004709 ORTHO05D005669 6.5e-15 84.0 79 49.4
DCAR_013071 Daucus carota HOM05D000316 ORTHO05D000374 1.1e-14 83.2 73 57.5
AUR62021597 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.4e-14 82.8 84 52.4
Medtr0287s0050 Medicago truncatula HOM05D004709 ORTHO05D005669 1.4e-14 82.8 81 46.9
Medtr7g012870 Medicago truncatula HOM05D004709 ORTHO05D005669 1.4e-14 82.8 81 46.9
FAN05G1711 Fragaria x ananassa HOM05D004709 ORTHO05D005669 3.2e-14 81.6 82 46.3
Ca_06818_v3 Cicer arietinum L. HOM05D004709 ORTHO05D005669 4.2e-14 81.3 79 48.1
Prupe.5G200900 Prunus persica HOM05D004709 ORTHO05D005669 4.2e-14 81.3 82 48.8
Rhsim12G0152500 Rhododendron simsii HOM05D004709 ORTHO05D005669 7.2e-14 80.5 76 50.0
FAN02G1874 Fragaria x ananassa HOM05D004709 ORTHO05D005669 1.2e-13 79.7 82 46.3
Dinv38784 Davidia involucrata HOM05D004709 ORTHO05D005669 1.6e-13 79.3 61 57.4
Lj1g0000800 Lotus japonicus HOM05D004709 ORTHO05D005669 6.1e-13 77.4 83 45.8
Sc04g0003050 Simmondsia chinensis HOM05D004709 ORTHO05D005669 7.9e-13 77.0 82 43.9
Gohir.D12G183150 Gossypium hirsutum HOM05D004709 ORTHO05D005669 2.3e-12 75.5 60 60.0
CBR_g38475 Chara braunii HOM05D004709 ORTHO05D005669 5.1e-12 74.3 79 46.8
MD08G1088600 Malus domestica HOM05D004709 ORTHO05D005669 8.8e-12 73.6 80 41.2
GSVIVG01007919001 Vitis vinifera HOM05D004709 ORTHO05D005669 8.8e-12 73.6 63 50.8
Actinidia09247 Actinidia chinensis HOM05D004709 ORTHO05D005669 1.1e-11 73.2 63 54.0
Cre08.g382850 Chlamydomonas reinhardtii HOM05D004709 ORTHO05D005669 1.1e-11 73.2 81 49.4
Actinidia04845 Actinidia chinensis HOM05D004709 ORTHO05D005669 1.5e-11 72.8 59 55.9
Dinv10689 Davidia involucrata HOM05D004709 ORTHO05D005669 2.0e-11 72.4 73 46.6
Mapoly0030s0074 Marchantia polymorpha HOM05D004709 ORTHO05D005669 2.0e-11 72.4 81 42.0
Sabra09G0061800 Salix brachista HOM05D004709 ORTHO05D005669 1.7e-10 69.3 55 54.5
Atru.chr9.371 Acer truncatum HOM05D004709 ORTHO05D005669 3.7e-10 68.2 82 42.7
SMO174G0212 Selaginella moellendorffii HOM05D004709 ORTHO05D005669 1.1e-09 66.6 78 48.7
Pp3c9_6850 Physcomitrium patens HOM05D004709 ORTHO05D005669 1.2e-08 63.2 79 41.8
Medtr7g083770 Medicago truncatula HOM05D004709 ORTHO05D005669 1.5e-08 62.8 73 41.1
Cfa024147 Carpinus fangiana HOM05D004709 ORTHO05D005669 2.6e-08 62.0 58 51.7
CSS0011072 Camellia sinensis var. sinensis HOM05D004709 ORTHO05D005669 1.3e-07 59.7 60 46.7
unitig_37.g12784 Utricularia gibba HOM05D004709 ORTHO05D005669 5.0e-07 57.8 55 50.9
CDE02G0474 Ceratophyllum demersum HOM05D004709 ORTHO05D005669 1.9e-06 55.8 33 72.7
PRCOL_00002203 Prasinoderma coloniale HOM05D004709 ORTHO05D005669 9.4e-06 53.5 71 43.7


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