Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 6.9e-139 497.3 246 100.0
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 5.8e-138 494.2 246 99.2
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 2.1e-135 485.7 246 98.0
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 4.0e-131 471.5 246 95.9
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 4.0e-131 471.5 246 95.9
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 1.3e-110 403.3 244 86.1
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.3e-110 402.5 248 85.9
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 6.3e-108 394.4 244 83.2
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 3.4e-106 388.7 244 81.1
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 3.8e-105 385.2 244 82.0
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 7.4e-101 370.9 246 80.9
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 2.4e-91 339.3 253 72.7
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 3.7e-84 315.5 250 67.2
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 2.3e-65 253.1 237 57.4
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 9.5e-64 247.7 223 61.4
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 2.1e-63 246.5 243 54.3
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 3.6e-63 245.7 198 62.6
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.8e-62 243.4 259 53.7
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 6.8e-62 241.5 231 57.6
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 8.9e-62 241.1 213 61.0
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 8.9e-62 241.1 220 58.6
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 8.9e-62 241.1 254 53.9
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 4.4e-61 238.8 246 54.5
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 5.7e-61 238.4 186 65.1
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 7.5e-61 238.0 231 56.7
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.3e-60 237.3 181 66.9
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 6.4e-60 235.0 193 62.7
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 8.3e-60 234.6 201 60.7
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 1.1e-59 234.2 235 54.9
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 2.4e-59 233.0 194 64.4
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 3.2e-59 232.6 173 68.2
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 7.0e-59 231.5 188 59.6
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 9.2e-59 231.1 248 51.2
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 1.6e-58 230.3 176 65.9
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.6e-58 230.3 189 59.8
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 2.7e-58 229.6 157 71.3
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 3.5e-58 229.2 186 62.4
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.5e-58 229.2 187 59.4
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.5e-58 229.2 182 61.0
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 5.9e-58 228.4 236 52.5
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 3.0e-57 226.1 160 71.2
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 5.0e-57 225.3 219 53.9
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 5.0e-57 225.3 146 74.7
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 5.0e-57 225.3 146 74.7
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 5.0e-57 225.3 173 61.3
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 8.6e-57 224.6 199 57.8
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 8.6e-57 224.6 222 53.2
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.1e-56 224.2 240 51.2
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.5e-56 223.8 147 71.4
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 2.5e-56 223.0 206 55.8
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 5.6e-56 221.9 179 62.6
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 9.5e-56 221.1 175 64.0
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 9.5e-56 221.1 209 56.0
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.2e-55 220.7 237 53.2
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.2e-55 220.7 149 73.8
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.2e-55 220.7 176 63.1
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.6e-55 220.3 195 59.0
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 3.6e-55 219.2 210 56.7
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 6.2e-55 218.4 209 58.4
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 8.0e-55 218.0 234 53.0
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 8.0e-55 218.0 147 69.4
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 8.0e-55 218.0 203 55.7
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.4e-54 217.2 176 60.8
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 3.1e-54 216.1 143 71.3
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 3.1e-54 216.1 190 58.4
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 6.8e-54 214.9 194 55.7
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 5.8e-53 211.8 231 49.8
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 2.2e-52 209.9 221 52.5
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 2.9e-52 209.5 146 67.8
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.7e-52 209.1 168 61.3
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 8.3e-52 208.0 177 58.8
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 8.3e-52 208.0 173 63.6
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.1e-51 207.6 174 59.2
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.4e-51 207.2 213 52.6
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 2.4e-51 206.5 179 59.2
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 9.2e-51 204.5 217 51.6
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.7e-50 203.0 177 58.8
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 3.0e-49 199.5 190 55.8
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 3.0e-49 199.5 174 60.3
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 3.9e-49 199.1 186 53.8
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 8.6e-49 198.0 143 66.4
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 2.5e-48 196.4 125 71.2
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.8e-47 193.0 221 49.3
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 8.9e-46 188.0 245 45.3
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 1.5e-45 187.2 172 55.2
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 4.4e-45 185.7 141 58.2
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 1.3e-41 174.1 169 52.1
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 8.6e-41 171.4 136 59.6
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 1.6e-39 167.2 312 37.5
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 1.8e-38 163.7 122 63.1
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 2.3e-38 163.3 189 50.8
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 8.9e-38 161.4 170 56.5
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 3.4e-37 159.5 208 40.9
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 9.9e-37 157.9 214 44.4
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 4.9e-36 155.6 179 46.9
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 5.4e-35 152.1 214 43.5
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 4.6e-34 149.1 109 61.5
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 2.5e-32 143.3 89 70.8
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 9.6e-32 141.4 177 46.3
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.8e-31 139.8 211 42.7
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.8e-31 139.8 211 42.7
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 2.0e-29 133.7 194 37.1
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.1e-27 127.9 213 40.8
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.1e-27 127.9 87 65.5
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 5.4e-27 125.6 155 47.7
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 6.0e-26 122.1 135 54.1
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 5.1e-25 119.0 161 42.2
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 4.8e-23 112.5 142 40.1
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 6.9e-22 108.6 88 59.1
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 7.1e-19 98.6 90 54.4
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 1.9e-11 73.9 141 36.9
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 6.7e-09 65.5 54 63.0
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 5.6e-08 62.4 92 42.4
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 9.6e-08 61.6 82 43.9
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 1.6e-07 60.8 88 42.0


User provided reference genes

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