Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 0.0e+00 1308.5 703 100.0
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 0.0e+00 1308.5 703 100.0
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 0.0e+00 1167.1 710 89.3
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 0.0e+00 1167.1 710 89.3
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 1.8e-296 1022.3 727 83.6
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 1.5e-287 992.6 725 78.2
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 1.0e-283 979.9 727 77.0
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 2.9e-267 925.2 728 72.5
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 1.2e-265 919.8 726 73.0
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 1.2e-260 903.3 725 71.0
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 3.7e-246 855.1 736 68.8
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 1.2e-241 840.1 713 69.8
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 8.3e-238 827.4 715 69.0
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 4.1e-237 825.1 710 69.0
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 2.0e-236 822.8 713 68.7
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 2.3e-232 809.3 710 68.7
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 7.6e-207 724.5 751 61.9
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 7.4e-170 601.7 761 53.2
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 3.2e-165 586.3 766 52.6
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 5.1e-86 323.2 846 34.3
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 1.6e-76 291.6 789 34.3
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 5.3e-75 286.6 787 33.8
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 9.9e-74 282.3 796 33.0
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 1.3e-73 282.0 796 33.4
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 2.2e-73 281.2 776 33.5
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 2.7e-71 274.2 798 32.7
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 7.9e-71 272.7 787 32.0
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 1.8e-70 271.6 786 32.2
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 3.0e-70 270.8 808 32.9
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 1.1e-69 268.9 782 33.0
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 2.5e-69 267.7 810 33.2
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 5.6e-69 266.5 783 34.6
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 5.8e-66 256.5 792 33.1
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 1.2e-63 248.8 798 35.2
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 6.7e-62 243.0 787 34.1
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 1.1e-61 242.3 776 32.3
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.5e-61 241.9 787 32.9
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 1.9e-61 241.5 784 32.1
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.6e-60 238.4 778 31.7
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 1.1e-59 235.7 774 31.4
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.4e-59 235.3 781 33.9
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 1.8e-59 235.0 778 35.0
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 4.0e-59 233.8 804 33.3
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 9.0e-59 232.6 773 31.4
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 5.8e-58 229.9 790 31.5
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 1.3e-57 228.8 785 32.0
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.3e-57 228.8 785 33.5
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 6.5e-57 226.5 789 31.4
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 1.2e-55 222.2 777 30.2
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 3.5e-55 220.7 776 30.7
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 1.8e-54 218.4 804 32.7
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 3.0e-54 217.6 808 30.2
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 5.1e-54 216.9 777 30.4
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 6.7e-54 216.5 783 30.8
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.9e-53 214.9 852 28.9
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 2.8e-52 211.1 797 29.7
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.4e-51 208.0 764 33.4
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 4.5e-50 203.8 775 31.9
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 1.3e-49 202.2 795 30.8
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 2.9e-49 201.1 771 28.8
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 2.9e-49 201.1 809 28.8
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 3.8e-49 200.7 799 28.9
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 2.5e-48 198.0 793 29.5
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 1.6e-47 195.3 803 29.8
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 2.7e-47 194.5 715 29.7
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 6.1e-47 193.4 775 31.0
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 3.3e-45 187.6 784 27.9
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 1.3e-41 175.6 822 29.2
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 6.5e-41 173.3 680 28.2
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 1.9e-40 171.8 778 29.6
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 3.2e-40 171.0 939 25.2
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.8e-38 165.2 744 28.4
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 3.9e-38 164.1 705 28.7
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 4.4e-37 160.6 661 28.0
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 4.4e-37 160.6 778 29.4
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 2.8e-36 157.9 921 25.8
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 1.4e-35 155.6 714 29.7
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 6.9e-35 153.3 794 28.5
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 4.5e-34 150.6 741 27.8
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 7.7e-34 149.8 741 28.6
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 4.2e-32 144.1 730 28.4
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 9.4e-32 142.9 714 27.7
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 1.2e-31 142.5 741 27.9
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 2.7e-31 141.4 789 28.0
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 6.1e-31 140.2 726 27.7
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 7.9e-31 139.8 787 27.8
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 1.8e-30 138.7 753 27.0
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 2.3e-30 138.3 663 27.9
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 3.0e-30 137.9 701 28.1
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 3.9e-30 137.5 785 28.5
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 6.7e-30 136.7 789 28.3
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 2.0e-29 135.2 638 28.5
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 1.3e-28 132.5 784 26.3
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 6.3e-28 130.2 702 28.2
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.1e-27 129.4 747 26.9
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 1.4e-27 129.0 682 28.2
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 1.8e-27 128.6 759 26.0
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 7.0e-27 126.7 722 26.7
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 1.6e-26 125.6 776 27.7
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 2.6e-26 124.8 813 26.7
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 1.3e-25 122.5 777 25.5
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 1.3e-25 122.5 797 25.8
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 3.8e-25 120.9 763 26.3
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 1.1e-24 119.4 693 26.8
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 3.2e-24 117.9 711 26.2
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 4.7e-23 114.0 799 25.2
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 3.3e-21 107.8 752 25.9
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 5.7e-21 107.1 708 28.0
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 3.7e-20 104.4 298 34.6
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 2.4e-19 101.7 712 24.3
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 1.7e-17 95.5 698 27.5
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 5.5e-16 90.5 695 25.6
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 5.5e-16 90.5 765 25.5
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 9.4e-16 89.7 694 25.5
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 3.6e-15 87.8 677 25.3
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 1.5e-13 82.4 686 24.3
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 9.8e-13 79.7 722 24.1
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 9.8e-13 79.7 558 28.0
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 1.7e-12 79.0 166 36.7
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.2e-12 78.6 706 25.6
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 2.1e-07 62.0 630 24.8
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 6.1e-07 60.5 639 23.6


User provided reference genes

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