Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 1.3e-157 559.7 277 100.0
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 1.3e-157 559.7 277 100.0
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 3.6e-152 541.6 277 97.8
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 3.6e-152 541.6 277 97.8
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 3.8e-138 495.0 260 94.2
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.5e-134 483.0 282 86.5
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 3.7e-125 451.8 264 85.6
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 3.2e-124 448.7 288 79.5
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 3.2e-124 448.7 278 82.7
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 2.3e-119 432.6 287 77.0
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 1.5e-118 429.9 271 80.8
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 5.6e-113 411.4 292 75.3
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 5.5e-76 288.5 294 60.9
C01p22270 Brassica napus HOM05D007298 ORTHO05D009226 1.1e-52 211.1 123 88.6
BcaC01g06536 Brassica carinata HOM05D007298 ORTHO05D009226 3.2e-52 209.5 113 90.3
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 2.3e-50 203.4 298 44.0
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 3.9e-50 202.6 298 44.0
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 3.9e-50 202.6 298 44.0
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 3.9e-50 202.6 312 43.9
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 2.6e-49 199.9 318 43.4
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 3.3e-49 199.5 303 46.2
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 3.1e-47 193.0 298 44.3
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 9.1e-47 191.4 304 44.1
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 7.7e-46 188.3 289 45.3
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 1.0e-45 188.0 308 42.2
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 1.0e-45 188.0 307 42.7
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 2.2e-45 186.8 312 43.9
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 3.8e-45 186.0 289 45.3
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 8.5e-45 184.9 289 44.3
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 2.5e-44 183.3 302 42.1
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 7.2e-44 181.8 306 45.4
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 9.4e-44 181.4 285 44.2
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 1.6e-43 180.6 295 43.1
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.1e-43 180.3 286 42.0
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 2.1e-43 180.3 281 43.1
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 2.7e-43 179.9 289 44.6
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 6.1e-43 178.7 265 43.8
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 6.1e-43 178.7 300 40.7
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 1.0e-42 177.9 289 43.9
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 2.3e-42 176.8 302 40.7
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 3.9e-42 176.0 306 38.9
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 3.9e-42 176.0 281 43.4
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 3.9e-42 176.0 315 41.6
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 2.6e-41 173.3 275 39.6
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 2.8e-40 169.9 286 42.7
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 8.2e-40 168.3 221 49.3
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 8.2e-40 168.3 221 49.3
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.4e-39 166.8 294 41.2
BcaC09g50700 Brassica carinata HOM05D007298 ORTHO05D009226 3.1e-39 166.4 96 87.5
BolC1t02157H Brassica oleracea HOM05D007298 ORTHO05D009226 3.1e-39 166.4 96 87.5
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 4.1e-39 166.0 295 43.1
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 7.0e-39 165.2 314 40.8
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 7.0e-39 165.2 267 42.3
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 9.1e-39 164.9 271 41.7
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 2.0e-38 163.7 245 44.9
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 3.5e-38 162.9 289 40.1
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 5.9e-38 162.2 314 39.5
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.0e-37 161.4 250 44.4
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 1.3e-37 161.0 283 41.3
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 1.3e-37 161.0 308 38.3
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 2.9e-37 159.8 308 39.0
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 8.5e-37 158.3 286 41.6
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 1.1e-36 157.9 242 45.9
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 3.2e-36 156.4 247 46.6
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 3.2e-36 156.4 281 40.9
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 1.6e-35 154.1 239 43.9
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 1.6e-35 154.1 307 38.1
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 2.7e-35 153.3 264 40.9
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.7e-35 153.3 282 40.8
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 2.7e-35 153.3 305 39.3
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 6.1e-35 152.1 212 47.2
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 8.0e-35 151.8 251 39.4
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 8.0e-35 151.8 232 47.4
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 1.0e-34 151.4 314 37.6
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.4e-34 151.0 263 42.2
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 4.0e-34 149.4 196 46.4
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 4.0e-34 149.4 258 41.1
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 6.7e-34 148.7 252 40.1
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 8.8e-34 148.3 271 41.3
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 1.2e-33 147.9 275 40.0
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 1.2e-33 147.9 248 42.3
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 1.5e-33 147.5 289 39.4
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.0e-33 147.1 259 40.5
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 4.4e-33 146.0 220 43.2
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 5.7e-33 145.6 259 40.2
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 2.8e-32 143.3 271 39.9
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 6.3e-32 142.1 120 65.8
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 6.3e-32 142.1 120 65.8
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 1.4e-31 141.0 224 46.4
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 1.8e-31 140.6 211 43.6
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 3.1e-31 139.8 228 42.5
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 3.1e-31 139.8 271 41.0
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 1.3e-29 134.4 106 67.9
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 2.9e-29 133.3 230 40.4
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 6.5e-29 132.1 226 41.6
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 1.5e-28 131.0 248 40.7
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 2.5e-28 130.2 200 44.5
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 3.2e-28 129.8 223 38.1
BolC3t13782H Brassica oleracea HOM05D007298 ORTHO05D009226 1.2e-25 121.3 63 88.9
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 1.2e-25 121.3 232 40.9
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 3.4e-25 119.8 293 36.2
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 4.8e-24 115.9 229 39.3
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.4e-23 114.4 331 33.8
BraA01t01717Z Brassica rapa HOM05D007298 ORTHO05D009226 2.4e-23 113.6 64 87.5
A01p17630 Brassica napus HOM05D007298 ORTHO05D009226 2.0e-22 110.5 64 84.4
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 2.2e-21 107.1 238 35.7
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 2.2e-21 107.1 238 35.7
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 2.5e-20 103.6 224 36.6
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 2.0e-17 94.0 125 47.2
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 1.1e-12 78.2 115 45.2
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.1e-12 78.2 213 33.8
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 7.0e-07 58.9 169 33.7
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 3.5e-06 56.6 96 38.5


User provided reference genes

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