Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p53990 Brassica napus HOM05D050604 ORTHO05D033303 5.0e-31 137.1 68 100.0
BolC7t45888H Brassica oleracea HOM05D050604 ORTHO05D033303 4.2e-30 134.0 68 98.5
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.2e-24 115.9 74 85.1
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.3e-07 59.3 63 58.7
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.3e-07 59.3 63 58.7
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.3e-07 59.3 42 78.6
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 2.9e-07 58.2 63 57.1
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.1e-06 56.2 63 57.1
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 1.1e-06 56.2 63 57.1
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.1e-06 56.2 63 57.1
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 2.5e-06 55.1 63 55.6
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 2.5e-06 55.1 63 55.6
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 2.5e-06 55.1 63 55.6
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 4.2e-06 54.3 62 54.8
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 4.2e-06 54.3 63 54.0
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 7.2e-06 53.5 62 54.8
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 7.2e-06 53.5 62 54.8
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 9.5e-06 53.1 63 54.0
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 9.5e-06 53.1 62 53.2


User provided reference genes

Program Settings