Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p53530 Brassica napus HOM05D010278 ORTHO05D012429 5.4e-81 304.3 156 100.0
BcaC06g32890 Brassica carinata HOM05D010278 ORTHO05D012429 2.0e-59 232.6 120 99.2
BolC7t45845H Brassica oleracea HOM05D010278 ORTHO05D012429 2.9e-58 228.8 120 97.5
A03p55240 Brassica napus HOM05D010278 ORTHO05D012429 1.4e-44 183.3 127 79.5
BraA03t14583Z Brassica rapa HOM05D010278 ORTHO05D012429 1.4e-44 183.3 127 79.5
BcaNung05634 Brassica carinata HOM05D010278 ORTHO05D012429 3.3e-38 162.2 127 74.8
BcaNung05632 Brassica carinata HOM05D010278 ORTHO05D012429 1.1e-33 147.1 107 78.5
BcaNung05790 Brassica carinata HOM05D010278 ORTHO05D012429 1.1e-33 147.1 107 78.5
AL7G28970 Arabidopsis lyrata HOM05D010278 ORTHO05D012429 2.7e-32 142.5 128 70.3
CARHR231710 Cardamine hirsuta HOM05D010278 ORTHO05D012429 7.9e-32 141.0 123 69.9
Carub.0007s1677 Capsella rubella HOM05D010278 ORTHO05D012429 3.7e-29 132.1 124 67.7
AT4G24275 Arabidopsis thaliana HOM05D010278 ORTHO05D012429 1.1e-28 130.6 128 66.4
Thhalv10027403m.g Eutrema salsugineum HOM05D010278 ORTHO05D012429 1.8e-28 129.8 123 63.4
A01p15640 Brassica napus HOM05D010278 ORTHO05D012429 1.2e-27 127.1 122 67.2
Sp7g22270 Schrenkiella parvula HOM05D010278 ORTHO05D012429 1.2e-27 127.1 110 68.2
BraA01t01502Z Brassica rapa HOM05D010278 ORTHO05D012429 2.0e-27 126.3 122 66.4
C01p19590 Brassica napus HOM05D010278 ORTHO05D012429 2.9e-26 122.5 122 65.6
BcaC09g50886 Brassica carinata HOM05D010278 ORTHO05D012429 3.8e-26 122.1 122 65.6
BolC1t01886H Brassica oleracea HOM05D010278 ORTHO05D012429 8.5e-26 120.9 122 64.8
BcaNung01136 Brassica carinata HOM05D010278 ORTHO05D012429 1.6e-24 116.7 122 63.9
Aa31LG4G9400 Aethionema arabicum HOM05D010278 ORTHO05D012429 7.4e-14 81.3 114 49.1
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 2.2e-10 69.7 88 50.0
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 1.5e-09 67.0 89 46.1
THA.LOC104809151 Tarenaya hassleriana HOM05D010278 ORTHO05D012429 1.5e-09 67.0 98 44.9
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 2.5e-09 66.2 84 50.0
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 3.2e-09 65.9 86 50.0
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 3.2e-09 65.9 93 46.2
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 3.2e-09 65.9 87 50.6
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 7.2e-09 64.7 92 46.7
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 9.4e-09 64.3 124 39.5
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 3.6e-08 62.4 94 43.6
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 3.6e-08 62.4 94 41.5
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 4.7e-08 62.0 107 39.3
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 6.1e-08 61.6 87 47.1
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.8e-07 60.1 129 34.9
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 3.0e-07 59.3 96 44.8
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 3.0e-07 59.3 94 40.4
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 3.0e-07 59.3 115 36.5
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 4.0e-07 58.9 93 40.9
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 6.7e-07 58.2 85 45.9
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.5e-06 57.0 130 33.8
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 3.3e-06 55.8 127 33.9
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 4.4e-06 55.5 105 35.2
ECA234G3545 Erigeron canadensis HOM05D008094 ORTHO05D010082 5.7e-06 55.1 81 44.4
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 5.7e-06 55.1 75 42.7
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 7.5e-06 54.7 86 41.9
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 7.5e-06 54.7 114 37.7
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 9.7e-06 54.3 92 43.5
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 9.7e-06 54.3 93 43.0


User provided reference genes

Program Settings