Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04240 Brassica carinata HOM05D009622 ORTHO05D011757 1.7e-103 379.4 198 100.0
C07p53170 Brassica napus HOM05D009622 ORTHO05D011757 1.7e-103 379.4 198 100.0
BolC7t45813H Brassica oleracea HOM05D009622 ORTHO05D011757 1.7e-103 379.4 198 100.0
A03p54810 Brassica napus HOM05D009622 ORTHO05D011757 1.1e-97 360.1 200 95.5
BraA03t14548Z Brassica rapa HOM05D009622 ORTHO05D011757 1.1e-97 360.1 200 95.5
BcaNung04082 Brassica carinata HOM05D009622 ORTHO05D011757 1.4e-86 323.2 199 87.9
BcaNung04083 Brassica carinata HOM05D009622 ORTHO05D011757 3.6e-82 308.5 175 90.9
Sp7g21830 Schrenkiella parvula HOM05D009622 ORTHO05D011757 8.4e-79 297.4 189 84.1
Thhalv10026259m.g Eutrema salsugineum HOM05D009622 ORTHO05D011757 3.3e-75 285.4 206 76.2
AL7G29480 Arabidopsis lyrata HOM05D009622 ORTHO05D011757 1.4e-73 280.0 198 73.7
AT4G23880 Arabidopsis thaliana HOM05D009622 ORTHO05D011757 3.1e-73 278.9 200 74.5
CARHR231260 Cardamine hirsuta HOM05D009622 ORTHO05D011757 5.5e-70 268.1 200 72.5
Carub.0007s1725 Capsella rubella HOM05D009622 ORTHO05D011757 2.7e-69 265.8 198 69.7
BolC1t01837H Brassica oleracea HOM05D009622 ORTHO05D011757 1.2e-61 240.4 196 69.9
BraA01t01456Z Brassica rapa HOM05D009622 ORTHO05D011757 1.2e-61 240.4 196 69.9
A01p15180 Brassica napus HOM05D009622 ORTHO05D011757 4.3e-59 231.9 183 71.6
BcaC09g50936 Brassica carinata HOM05D009622 ORTHO05D011757 8.2e-58 227.6 183 71.0
C01p19110 Brassica napus HOM05D009622 ORTHO05D011757 8.2e-58 227.6 183 71.0
BcaB03g12400 Brassica carinata HOM05D009622 ORTHO05D011757 1.7e-55 219.9 193 64.2
BcaNung01094 Brassica carinata HOM05D009622 ORTHO05D011757 5.7e-51 204.9 183 66.1
A08p22040 Brassica napus HOM05D009622 ORTHO05D011757 1.3e-50 203.8 201 60.2
BraA08t34155Z Brassica rapa HOM05D009622 ORTHO05D011757 1.3e-50 203.8 201 60.2
C03p80370 Brassica napus HOM05D009622 ORTHO05D011757 2.4e-49 199.5 200 59.5
BolC3t20285H Brassica oleracea HOM05D009622 ORTHO05D011757 2.4e-49 199.5 200 59.5
BcaC01g00479 Brassica carinata HOM05D009622 ORTHO05D011757 3.1e-49 199.1 200 59.0
Aa31LG6G7130 Aethionema arabicum HOM05D009622 ORTHO05D011757 1.0e-47 194.1 194 60.3
THA.LOC104807001 Tarenaya hassleriana HOM05D009622 ORTHO05D011757 1.1e-14 84.3 194 34.5
THA.LOC104815074 Tarenaya hassleriana HOM05D009622 ORTHO05D011757 8.8e-12 74.7 197 35.0
A06p33330 Brassica napus HOM05D011751 ORTHO05D016060 2.7e-08 63.2 56 66.1
BcaNung06238 Brassica carinata HOM05D011751 ORTHO05D016060 7.7e-08 61.6 68 54.4
BcaC06g35152 Brassica carinata HOM05D011751 ORTHO05D016060 1.3e-07 60.8 57 61.4
BolC3t16916H Brassica oleracea HOM05D011751 ORTHO05D016060 1.3e-07 60.8 68 54.4
C09p31610 Brassica napus HOM05D011751 ORTHO05D016060 6.6e-07 58.5 68 52.9
BolC9t56017H Brassica oleracea HOM05D011751 ORTHO05D016060 6.6e-07 58.5 68 52.9
C03p54400 Brassica napus HOM05D011751 ORTHO05D016060 8.6e-07 58.2 68 51.5
C07p25110 Brassica napus HOM05D011751 ORTHO05D016060 8.6e-07 58.2 68 51.5
C08p27730 Brassica napus HOM05D011751 ORTHO05D016060 8.6e-07 58.2 68 51.5
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.1e-06 57.8 174 28.7
C04p72000 Brassica napus HOM05D011751 ORTHO05D101175 2.5e-06 56.6 67 50.7
C09p22920 Brassica napus HOM05D011751 ORTHO05D102998 5.6e-06 55.5 67 49.3


User provided reference genes

Program Settings