Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p51580 Brassica napus HOM05D009869 ORTHO05D011947 3.8e-47 191.0 88 100.0
C07p51610 Brassica napus HOM05D009869 ORTHO05D011947 6.4e-47 190.3 88 98.9
C07p51590 Brassica napus HOM05D009869 ORTHO05D011947 1.1e-46 189.5 88 98.9
A03p53320 Brassica napus HOM05D009869 ORTHO05D011947 2.4e-46 188.3 88 97.7
A03p53290 Brassica napus HOM05D009869 ORTHO05D011947 1.5e-43 179.1 88 95.5
BraA03t14396Z Brassica rapa HOM05D009869 ORTHO05D011947 1.9e-43 178.7 86 95.3
BolC7t45656H Brassica oleracea HOM05D009869 ORTHO05D011947 3.3e-43 177.9 82 100.0
AL7G31580 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 1.4e-33 146.0 88 76.1
A01p13430 Brassica napus HOM05D009869 ORTHO05D011947 2.6e-32 141.7 88 69.3
AT4G22115 Arabidopsis thaliana HOM05D009869 ORTHO05D011947 1.3e-31 139.4 88 73.9
C01p16230 Brassica napus HOM05D009869 ORTHO05D011947 2.2e-31 138.7 88 69.3
BolC1t01576H Brassica oleracea HOM05D009869 ORTHO05D011947 1.1e-30 136.3 88 68.2
Sp7g20250 Schrenkiella parvula HOM05D009869 ORTHO05D011947 4.2e-30 134.4 66 87.9
AT4G22105 Arabidopsis thaliana HOM05D009869 ORTHO05D011947 1.0e-28 129.8 87 70.1
CARHR228920 Cardamine hirsuta HOM05D009869 ORTHO05D011947 1.0e-28 129.8 88 68.2
AL7G31602 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 1.8e-28 129.0 87 70.1
Thhalv10026978m.g Eutrema salsugineum HOM05D009869 ORTHO05D011947 1.8e-28 129.0 83 73.5
Carub.0007s1924 Capsella rubella HOM05D009869 ORTHO05D011947 6.7e-28 127.1 87 67.8
CARHR228930 Cardamine hirsuta HOM05D009869 ORTHO05D011947 1.3e-26 122.9 88 65.9
Carub.0003s2552 Capsella rubella HOM05D009869 ORTHO05D011947 1.0e-23 113.2 83 66.3
Carub.0006s2601 Capsella rubella HOM05D009869 ORTHO05D011947 4.2e-22 107.8 83 61.4
Carub.0007s1921 Capsella rubella HOM05D009869 ORTHO05D011947 1.8e-20 102.4 83 60.2
Carub.0007s1923 Capsella rubella HOM05D009869 ORTHO05D011947 1.8e-20 102.4 83 60.2
BolC3t20679H Brassica oleracea HOM05D009869 ORTHO05D011947 1.5e-19 99.4 86 57.0
A03p53280 Brassica napus HOM05D009869 ORTHO05D011947 1.9e-19 99.0 66 65.2
AL1G26060 Arabidopsis lyrata HOM05D009882 ORTHO05D018440 2.5e-11 72.0 97 42.3
Carub.0003s1791 Capsella rubella HOM05D011909 ORTHO05D014045 6.3e-10 67.4 88 42.0
Carub.0001s1386 Capsella rubella HOM05D009882 ORTHO05D018440 3.1e-09 65.1 97 38.1
AL3G31350 Arabidopsis lyrata HOM05D011909 ORTHO05D014045 4.1e-09 64.7 90 36.7
C05p47910 Brassica napus HOM05D011909 ORTHO05D014045 6.9e-09 63.9 90 40.0
Carub.0003s1788 Capsella rubella HOM05D011909 ORTHO05D014045 2.6e-08 62.0 88 40.9
BraA05t21993Z Brassica rapa HOM05D011909 ORTHO05D014045 7.7e-08 60.5 74 41.9
AT1G08695 Arabidopsis thaliana HOM05D012267 ORTHO05D014432 1.3e-07 59.7 95 33.7
Carub.0003s1790 Capsella rubella HOM05D011909 ORTHO05D014045 1.3e-07 59.7 88 37.5
AT5G45875 Arabidopsis thaliana HOM05D011909 ORTHO05D014045 1.7e-07 59.3 91 36.3
Thhalv10021830m.g Eutrema salsugineum HOM05D010364 ORTHO05D012454 5.0e-07 57.8 89 37.1
Aa31LG6G15980 Aethionema arabicum HOM05D009869 ORTHO05D011947 6.5e-07 57.4 90 40.0
C03p19130 Brassica napus HOM05D009882 ORTHO05D014327 1.1e-06 56.6 96 38.5
AL2G19850 Arabidopsis lyrata HOM05D009882 ORTHO05D014327 2.5e-06 55.5 95 33.7
BolC3t14302H Brassica oleracea HOM05D009882 ORTHO05D014327 3.2e-06 55.1 96 37.5
BolC5t33503H Brassica oleracea HOM05D011909 ORTHO05D014045 3.2e-06 55.1 90 37.8
A08p32050 Brassica napus HOM05D009882 ORTHO05D018440 4.2e-06 54.7 94 35.1
Aa31LG6G15990 Aethionema arabicum HOM05D009882 ORTHO05D014327 5.5e-06 54.3 85 38.8
C08p16530 Brassica napus HOM05D009882 ORTHO05D018440 5.5e-06 54.3 94 35.1
BNapus_Darmor_BZH_scaffold_38p02410 Brassica napus HOM05D012267 ORTHO05D014432 9.4e-06 53.5 91 28.6
BNapus_Darmor_BZH_scaffold_38p02430 Brassica napus HOM05D012267 ORTHO05D014432 9.4e-06 53.5 91 28.6
BNapus_Darmor_BZH_scaffold_38p02450 Brassica napus HOM05D012267 ORTHO05D014432 9.4e-06 53.5 91 28.6


User provided reference genes

Program Settings