Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-82 309.7 153 100.0
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 3.7e-82 308.1 153 99.3
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 3.7e-82 308.1 153 99.3
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.4e-78 296.2 153 96.1
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 5.5e-78 294.3 153 96.7
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 3.6e-77 291.6 153 94.8
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 3.2e-70 268.5 153 86.9
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 3.6e-69 265.0 153 88.2
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 9.7e-67 256.9 155 84.5
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 2.8e-66 255.4 155 83.9
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 6.3e-66 254.2 157 82.2
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 6.3e-66 254.2 157 82.2
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 1.8e-65 252.7 155 83.2
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 2.0e-64 249.2 156 83.3
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 2.6e-64 248.8 157 82.8
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 6.5e-63 244.2 153 82.4
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 4.2e-62 241.5 155 80.0
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 1.1e-49 200.3 109 92.7
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 1.0e-47 193.7 153 66.7
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 3.2e-46 188.7 99 96.0
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 4.7e-45 184.9 153 62.7
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 2.0e-40 169.5 103 74.8
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 4.5e-40 168.3 103 74.8
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 4.5e-40 168.3 109 78.0
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.7e-39 166.4 110 75.5
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 2.3e-39 166.0 103 73.8
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 3.8e-39 165.2 111 73.9
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 8.6e-39 164.1 102 79.4
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 8.6e-39 164.1 106 75.5
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.5e-38 163.3 103 73.8
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 1.9e-38 162.9 109 70.6
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.9e-38 162.9 105 73.3
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.5e-38 162.5 111 73.9
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 5.6e-38 161.4 102 76.5
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 5.6e-38 161.4 102 77.5
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 7.3e-38 161.0 113 72.6
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 1.2e-37 160.2 93 80.6
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.6e-37 159.8 101 76.2
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 1.6e-37 159.8 133 63.9
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 4.7e-37 158.3 111 72.1
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 6.1e-37 157.9 110 71.8
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 8.0e-37 157.5 97 80.4
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 8.0e-37 157.5 97 80.4
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.0e-36 157.1 147 57.1
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 1.8e-36 156.4 90 81.1
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.8e-36 156.4 139 59.7
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 2.3e-36 156.0 153 56.9
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 2.3e-36 156.0 93 78.5
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 2.3e-36 156.0 108 71.3
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 5.2e-36 154.8 108 71.3
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 6.8e-36 154.5 99 77.8
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 8.9e-36 154.1 107 73.8
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.2e-35 153.7 108 70.4
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 1.2e-35 153.7 88 81.8
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 1.2e-35 153.7 86 83.7
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 1.5e-35 153.3 103 71.8
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.5e-35 153.3 96 72.9
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 1.5e-35 153.3 107 72.0
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.5e-35 153.3 101 73.3
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.5e-35 153.3 127 61.4
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 2.0e-35 152.9 90 77.8
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 2.0e-35 152.9 96 72.9
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 2.0e-35 152.9 112 69.6
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.0e-35 152.9 134 60.4
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 2.0e-35 152.9 94 78.7
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 2.0e-35 152.9 143 59.4
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 4.4e-35 151.8 101 72.3
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 4.4e-35 151.8 108 69.4
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 4.4e-35 151.8 102 73.5
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 7.5e-35 151.0 103 72.8
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 7.5e-35 151.0 138 58.0
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.3e-34 150.2 147 54.4
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 2.2e-34 149.4 139 59.7
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 3.7e-34 148.7 135 56.3
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 4.9e-34 148.3 107 70.1
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 4.9e-34 148.3 91 74.7
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 4.9e-34 148.3 91 74.7
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.1e-33 147.1 90 76.7
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 1.4e-33 146.7 81 82.7
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 3.2e-33 145.6 106 69.8
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 5.4e-33 144.8 91 71.4
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 5.4e-33 144.8 95 73.7
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 9.2e-33 144.1 91 71.4
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 9.2e-33 144.1 100 74.0
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 1.6e-32 143.3 83 81.9
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 1.6e-32 143.3 82 81.7
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 2.7e-32 142.5 111 66.7
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 2.7e-32 142.5 106 68.9
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 4.6e-32 141.7 149 53.0
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 4.6e-32 141.7 80 81.2
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.0e-31 140.6 122 61.5
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.3e-30 135.2 77 84.4
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 6.2e-29 131.3 71 83.1
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 4.4e-27 125.2 85 69.4
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 4.9e-26 121.7 80 70.0
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 6.4e-26 121.3 68 79.4
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 2.4e-25 119.4 112 57.1
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 7.0e-25 117.9 83 72.3
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 3.0e-23 112.5 89 65.2
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.1e-22 110.5 106 54.7
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 7.3e-22 107.8 90 62.2
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 9.5e-22 107.5 122 52.5
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 2.1e-21 106.3 79 64.6
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.4e-19 99.0 56 83.9
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 6.6e-15 84.7 78 61.5
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 5.6e-14 81.6 68 63.2


User provided reference genes

Program Settings