Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p51060 Brassica napus HOM05D012071 ORTHO05D013970 8.5e-28 126.7 86 100.0
BolC7t45606H Brassica oleracea HOM05D012071 ORTHO05D013970 5.5e-27 124.0 86 97.7
BraA03t14336Z Brassica rapa HOM05D012071 ORTHO05D013970 9.7e-24 113.2 86 94.2
A03p52620 Brassica napus HOM05D012071 ORTHO05D013970 1.2e-21 106.3 86 90.7
BcaNung04703 Brassica carinata HOM05D012071 ORTHO05D013970 1.1e-19 99.8 83 85.5
BcaC09g51267 Brassica carinata HOM05D012071 ORTHO05D013970 3.2e-19 98.2 83 86.7
C01p14990 Brassica napus HOM05D012071 ORTHO05D013970 7.2e-19 97.1 83 66.3
A01p12410 Brassica napus HOM05D000777 ORTHO05D000595 9.4e-19 96.7 51 92.2
BraA01t01187Z Brassica rapa HOM05D000777 ORTHO05D000595 9.4e-19 96.7 51 92.2
BolC1t01447H Brassica oleracea HOM05D000777 ORTHO05D000595 8.0e-18 93.6 83 84.3
Carub.0007s2040 Capsella rubella HOM05D012071 ORTHO05D013970 1.8e-17 92.4 82 85.4
Sp7g19100 Schrenkiella parvula HOM05D012071 ORTHO05D013970 2.3e-17 92.0 83 89.2
AL7G33090 Arabidopsis lyrata HOM05D012071 ORTHO05D013970 3.0e-17 91.7 80 81.2
AT4G21060 Arabidopsis thaliana HOM05D000777 ORTHO05D000595 4.0e-17 91.3 52 88.5
CARHR227630 Cardamine hirsuta HOM05D012071 ORTHO05D013970 6.8e-17 90.5 49 91.8
Thhalv10026664m.g Eutrema salsugineum HOM05D012071 ORTHO05D013970 3.5e-13 78.2 83 80.7
Aa31LG6G3080 Aethionema arabicum HOM05D012071 ORTHO05D013970 1.7e-12 75.9 43 93.0
A08p15420 Brassica napus HOM05D012071 ORTHO05D013970 1.1e-11 73.2 45 82.2
BcaB03g11702 Brassica carinata HOM05D012071 ORTHO05D013970 3.7e-07 58.2 45 68.9
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 4.9e-07 57.8 39 79.5
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 4.9e-07 57.8 39 79.5
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 4.9e-07 57.8 39 79.5
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 4.9e-07 57.8 39 79.5
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 4.9e-07 57.8 39 79.5
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 4.9e-07 57.8 39 79.5
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 4.9e-07 57.8 39 79.5
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.4e-06 56.2 39 76.9
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 1.4e-06 56.2 39 76.9
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 1.4e-06 56.2 39 76.9
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 1.8e-06 55.8 39 74.4
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 3.1e-06 55.1 39 74.4
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 3.1e-06 55.1 39 76.9
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 3.1e-06 55.1 39 76.9
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 3.1e-06 55.1 39 76.9
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 3.1e-06 55.1 39 76.9
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 3.1e-06 55.1 39 76.9
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 4.1e-06 54.7 39 74.4
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 4.1e-06 54.7 39 76.9
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 5.4e-06 54.3 39 66.7
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 7.0e-06 53.9 39 76.9
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 7.0e-06 53.9 39 76.9
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 9.2e-06 53.5 46 67.4
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 9.2e-06 53.5 39 71.8


User provided reference genes

Program Settings