Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 1.1e-250 869.8 512 100.0
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 1.1e-226 790.0 439 91.8
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 3.1e-186 655.6 413 83.1
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 1.6e-177 626.7 503 76.5
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 6.6e-160 568.2 525 70.3
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-159 567.0 544 67.3
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 1.5e-156 557.0 361 79.2
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 2.0e-156 556.6 378 76.7
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 2.6e-156 556.2 341 85.0
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 5.6e-151 538.5 361 77.6
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-146 524.2 349 78.2
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 6.0e-129 465.3 354 69.5
BolC5t30511H Brassica oleracea HOM05D004230 ORTHO05D007976 2.5e-119 433.3 275 84.0
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 1.8e-117 427.2 406 56.9
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 7.1e-114 415.2 425 55.1
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 1.6e-113 414.1 425 54.8
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 1.0e-112 411.4 305 73.1
A06p33150 Brassica napus HOM05D004230 ORTHO05D007976 8.7e-112 408.3 232 89.7
BcaB06g26529 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-111 407.9 286 76.6
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 1.5e-111 407.5 380 57.4
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 5.9e-108 395.6 328 64.3
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 3.0e-104 383.3 391 55.2
A06p33140 Brassica napus HOM05D004230 ORTHO05D007976 2.5e-98 363.6 320 76.9
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-95 354.8 306 66.7
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 4.1e-93 346.3 309 60.5
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-90 338.2 411 48.4
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 1.2e-89 334.7 332 56.3
Carub.0007s3043 Capsella rubella HOM05D004230 ORTHO05D007976 4.7e-89 332.8 295 62.0
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 3.0e-88 330.1 430 46.7
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-86 324.7 407 46.4
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 4.8e-86 322.8 430 46.0
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 5.3e-85 319.3 400 45.2
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 9.1e-85 318.5 299 57.9
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 4.5e-84 316.2 301 58.1
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 2.9e-83 313.5 305 57.0
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 2.9e-83 313.5 305 57.0
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 4.2e-82 309.7 401 47.4
BraA06t26245Z Brassica rapa HOM05D004230 ORTHO05D007976 1.0e-80 305.1 175 87.4
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 2.3e-80 303.9 369 47.2
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 4.0e-80 303.1 296 56.8
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 2.6e-79 300.4 301 56.8
Sp3g24280 Schrenkiella parvula HOM05D004230 ORTHO05D007976 7.7e-76 288.9 338 52.1
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 2.5e-74 283.9 312 51.6
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 4.2e-74 283.1 285 55.4
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 2.1e-73 280.8 396 44.9
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 3.6e-73 280.0 328 47.6
Carub.0012s0003 Capsella rubella HOM05D004230 ORTHO05D007976 6.8e-72 275.8 250 58.8
C08p27070 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-70 271.6 148 87.2
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 6.3e-70 269.2 343 47.5
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 3.1e-69 266.9 398 41.7
C01p22890 Brassica napus HOM05D004230 ORTHO05D007976 9.1e-69 265.4 206 64.6
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 2.7e-68 263.8 349 44.7
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 4.5e-68 263.1 277 55.2
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 5.9e-68 262.7 385 42.6
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.0e-67 261.9 223 61.0
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 2.3e-67 260.8 388 42.0
BolC4t25589H Brassica oleracea HOM05D004230 ORTHO05D007976 1.5e-66 258.1 129 98.4
BolC3t17228H Brassica oleracea HOM05D004230 ORTHO05D007976 1.4e-64 251.5 124 94.4
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 2.3e-64 250.8 276 53.6
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 5.2e-64 249.6 276 54.3
Carub.0007s3042 Capsella rubella HOM05D004230 ORTHO05D007976 4.9e-62 243.0 251 57.0
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 9.2e-61 238.8 202 66.8
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.7e-59 234.6 310 46.1
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 2.5e-58 230.7 229 55.9
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 4.3e-58 229.9 204 56.4
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.2e-57 228.4 263 50.2
BcaB04g18000 Brassica carinata HOM05D004230 ORTHO05D007976 6.1e-57 226.1 210 61.9
BraA03t15403Z Brassica rapa HOM05D004230 ORTHO05D007976 1.5e-55 221.5 273 48.4
BolC8t50525H Brassica oleracea HOM05D004230 ORTHO05D027608 5.4e-53 213.0 250 52.4
BolC3t20713H Brassica oleracea HOM05D004230 ORTHO05D007976 9.2e-53 212.2 170 64.7
BcaC07g39750 Brassica carinata HOM05D004230 ORTHO05D027608 3.5e-52 210.3 220 55.5
Sp2g07590 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.1e-50 205.3 322 41.3
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 3.3e-50 203.8 400 36.8
AT1G43720 Arabidopsis thaliana HOM05D004230 ORTHO05D018474 1.6e-49 201.4 222 50.9
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-46 191.8 242 49.2
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 2.2e-46 191.0 302 41.4
AL7G44480 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.4e-45 187.6 182 51.1
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.1e-45 186.8 233 45.1
BcaC02g08615 Brassica carinata HOM05D004230 ORTHO05D007976 4.1e-45 186.8 284 44.7
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 6.0e-44 183.0 254 43.3
AT1G35820 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.0e-43 182.2 367 35.7
BolC1t03622H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-43 181.8 205 50.7
Carub.0007s3045 Capsella rubella HOM05D004230 ORTHO05D007976 1.3e-43 181.8 152 62.5
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 6.6e-43 179.5 369 34.1
C03p27690 Brassica napus HOM05D004230 ORTHO05D007976 1.4e-40 171.8 138 59.4
CARHR145800 Cardamine hirsuta HOM05D004230 ORTHO05D007976 3.1e-40 170.6 231 46.3
Sp5g19020 Schrenkiella parvula HOM05D004230 ORTHO05D007976 5.2e-40 169.9 295 39.3
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 1.2e-39 168.7 207 49.3
AT3G42870 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 2.0e-39 167.9 218 45.4
C05p46300 Brassica napus HOM05D004230 ORTHO05D007976 4.4e-39 166.8 138 58.7
BraA10t43214Z Brassica rapa HOM05D004230 ORTHO05D007976 4.4e-39 166.8 161 50.9
BolC5t33360H Brassica oleracea HOM05D004230 ORTHO05D007976 4.1e-37 160.2 104 68.3
BolC8t46909H Brassica oleracea HOM05D004230 ORTHO05D007976 5.1e-35 153.3 155 51.6
AL8G23470 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 6.6e-35 152.9 131 60.3
BraA05t21003Z Brassica rapa HOM05D004230 ORTHO05D041249 4.3e-34 150.2 164 49.4
AL7G46530 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 9.5e-34 149.1 115 64.3
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 1.2e-33 148.7 353 31.7
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 2.4e-32 144.4 353 31.2
A03p63250 Brassica napus HOM05D004230 ORTHO05D007976 4.0e-32 143.7 165 52.1
C03p27680 Brassica napus HOM05D004230 ORTHO05D007976 6.8e-32 142.9 202 44.6
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 6.8e-32 142.9 344 31.1
Carub.0005s0823 Capsella rubella HOM05D004230 ORTHO05D007976 6.8e-32 142.9 248 37.1
Sp1g33580 Schrenkiella parvula HOM05D004230 ORTHO05D007976 7.6e-31 139.4 285 36.5
BolC2t12231H Brassica oleracea HOM05D004230 ORTHO05D018474 9.9e-31 139.0 150 48.0
BcaC09g49284 Brassica carinata HOM05D004230 ORTHO05D007976 1.9e-29 134.8 128 53.9
C02p19260 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-27 128.6 128 49.2
BolC5t33361H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-27 128.6 193 42.5
Carub.0007s3014 Capsella rubella HOM05D004230 ORTHO05D007976 1.7e-27 128.3 173 46.8
BcaC02g08607 Brassica carinata HOM05D004230 ORTHO05D018474 2.0e-23 114.8 185 41.6
C04p40130 Brassica napus HOM05D004230 ORTHO05D097676 4.4e-23 113.6 60 93.3
CARHR102540 Cardamine hirsuta HOM05D004230 ORTHO05D007976 9.9e-23 112.5 153 43.1
BcaC03g18110 Brassica carinata HOM05D004230 ORTHO05D007976 1.9e-21 108.2 112 48.2
BolC4t26773H Brassica oleracea HOM05D004230 ORTHO05D007976 1.6e-20 105.1 92 53.3
BcaC01g00380 Brassica carinata HOM05D004230 ORTHO05D007976 4.3e-18 97.1 105 43.8
CARHR034450 Cardamine hirsuta HOM05D004230 ORTHO05D007976 4.3e-18 97.1 81 54.3
Sp4g09110 Schrenkiella parvula HOM05D004230 ORTHO05D000563 9.6e-18 95.9 374 24.6
BcaC09g49346 Brassica carinata HOM05D004230 ORTHO05D024011 1.6e-17 95.1 95 52.6
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 2.1e-17 94.7 75 57.3
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 2.1e-17 94.7 75 57.3
C01p41050 Brassica napus HOM05D004230 ORTHO05D024011 6.2e-17 93.2 102 52.0
BolC1t04060H Brassica oleracea HOM05D004230 ORTHO05D024011 6.2e-17 93.2 102 52.0
BolC3t18593H Brassica oleracea HOM05D004230 ORTHO05D018474 8.1e-17 92.8 171 38.6
BraA06t26246Z Brassica rapa HOM05D004230 ORTHO05D042725 2.4e-16 91.3 47 83.0
Sp3g29180 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.5e-15 88.6 156 35.9
C08p27080 Brassica napus HOM05D004230 ORTHO05D042725 2.6e-15 87.8 47 80.9
BcaC01g02567 Brassica carinata HOM05D004230 ORTHO05D018474 5.8e-15 86.7 171 37.4
BolC2t12233H Brassica oleracea HOM05D004230 ORTHO05D007976 5.8e-15 86.7 75 52.0
AT5G36080 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 7.6e-15 86.3 78 51.3
A05p20980 Brassica napus HOM05D004230 ORTHO05D041249 1.3e-14 85.5 164 37.2
BolC4t26781H Brassica oleracea HOM05D004230 ORTHO05D018474 1.7e-14 85.1 160 38.8
THA.LOC104819338 Tarenaya hassleriana HOM05D004230 ORTHO05D014126 2.2e-14 84.7 342 26.3
AL3G43870 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.9e-14 84.3 79 46.8
A01p37400 Brassica napus HOM05D004230 ORTHO05D021768 3.2e-13 80.9 88 43.2
AL6G45690 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.2e-13 80.5 79 45.6
BolC3t20148H Brassica oleracea HOM05D004230 ORTHO05D007976 4.6e-12 77.0 70 51.4
BraA09t39106Z Brassica rapa HOM05D004230 ORTHO05D007976 4.6e-12 77.0 71 50.7
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 8.7e-11 72.8 46 73.9
C01p41060 Brassica napus HOM05D004230 ORTHO05D021768 8.7e-11 72.8 96 42.7
CARHR113870 Cardamine hirsuta HOM05D004230 ORTHO05D007976 4.3e-10 70.5 64 53.1
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 1.8e-08 65.1 183 25.7
A09p29770 Brassica napus HOM05D004230 ORTHO05D007976 2.4e-08 64.7 146 36.3
C07p04500 Brassica napus HOM05D004230 ORTHO05D007976 4.0e-08 63.9 100 37.0
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 5.3e-08 63.5 174 27.6
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 1.2e-07 62.4 221 24.9
BcaB05g23937 Brassica carinata HOM05D004230 ORTHO05D021768 2.0e-07 61.6 63 47.6
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 4.5e-07 60.5 204 27.5
BolC7t40845H Brassica oleracea HOM05D004230 ORTHO05D007976 5.8e-07 60.1 100 36.0
BolC2t07759H Brassica oleracea HOM05D006735 ORTHO05D009558 3.8e-06 57.4 102 31.4
BolC5t31791H Brassica oleracea HOM05D006735 ORTHO05D009558 6.4e-06 56.6 127 29.9
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 8.4e-06 56.2 105 29.5
A04p10960 Brassica napus HOM05D037366 ORTHO05D042224 8.4e-06 56.2 44 61.4
BraA04t16761Z Brassica rapa HOM05D037366 ORTHO05D042224 8.4e-06 56.2 44 61.4
BraA06t27442Z Brassica rapa HOM05D004230 ORTHO05D007976 8.4e-06 56.2 76 42.1


User provided reference genes

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