Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 7.8e-35 149.8 71 100.0
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 7.8e-35 149.8 71 100.0
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 6.6e-34 146.7 71 97.2
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 1.1e-33 146.0 71 97.2
BolC7t45509H Brassica oleracea HOM05D000817 ORTHO05D000702 3.0e-26 121.3 65 90.8
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 1.5e-25 119.0 69 81.2
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 2.1e-24 115.2 67 79.1
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 2.6e-22 108.2 69 78.3
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 1.0e-18 96.3 73 71.2
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 1.0e-18 96.3 73 71.2
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 5.6e-17 90.5 73 68.5
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 5.6e-17 90.5 73 68.5
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 5.6e-17 90.5 73 68.5
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 7.1e-12 73.6 73 52.1
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.1e-11 72.0 74 51.4
C05p61610 Brassica napus HOM05D008462 ORTHO05D010511 3.5e-11 71.2 74 58.1
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 4.6e-11 70.9 73 52.1
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 5.1e-10 67.4 70 50.0
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.1e-10 67.4 70 50.0
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.1e-10 67.4 70 51.4
BraA05t22955Z Brassica rapa HOM05D008462 ORTHO05D010511 5.1e-10 67.4 75 56.0
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 5.1e-10 67.4 74 52.7
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.9e-09 65.5 70 50.0
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.5e-09 65.1 71 47.9
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 4.3e-09 64.3 70 44.3
C07p01380 Brassica napus HOM05D008462 ORTHO05D010511 5.6e-09 63.9 78 52.6
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 7.3e-09 63.5 70 47.1
C05p61600 Brassica napus HOM05D008462 ORTHO05D010511 9.5e-09 63.2 78 52.6
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.2e-08 62.8 71 50.7
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 1.2e-08 62.8 70 47.1
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.6e-08 62.4 70 48.6
C05p42410 Brassica napus HOM05D046735 ORTHO05D010511 2.1e-08 62.0 68 51.5
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 3.6e-08 61.2 69 44.9
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 5.2e-07 57.4 74 47.3
Thhalv10002869m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 5.2e-07 57.4 75 48.0
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 6.8e-07 57.0 67 40.3
Cpa.g.c26396.1 Carica papaya HOM05D018895 ORTHO05D010851 1.5e-06 55.8 66 43.9
Cpa.g.c34278 Carica papaya HOM05D018895 ORTHO05D010851 1.5e-06 55.8 66 43.9
Cpa.g.sc8.111 Carica papaya HOM05D018895 ORTHO05D010851 1.5e-06 55.8 66 43.9
Cpa.g.sc8.112 Carica papaya HOM05D018895 ORTHO05D010851 1.5e-06 55.8 66 43.9
BolC5t34818H Brassica oleracea HOM05D008462 ORTHO05D010511 2.6e-06 55.1 89 44.9
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 4.4e-06 54.3 71 39.4
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.4e-06 54.3 77 44.2


User provided reference genes

Program Settings