Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 7.2e-253 876.7 427 100.0
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 9.1e-248 859.8 422 98.6
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 7.7e-247 856.7 427 97.4
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.3e-230 802.7 405 95.8
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 8.1e-220 766.9 426 86.6
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 6.2e-212 740.7 426 84.7
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 4.3e-205 718.0 423 83.9
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 9.9e-202 706.8 424 82.1
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 9.6e-197 690.3 417 81.3
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 4.5e-186 654.8 401 79.6
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 2.2e-185 652.5 410 76.1
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 1.0e-161 573.9 417 64.7
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 3.2e-160 568.9 403 68.0
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 2.7e-159 565.8 422 62.3
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 8.8e-158 560.8 429 63.4
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 1.1e-157 560.5 413 64.4
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 7.4e-157 557.8 412 64.8
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 7.4e-157 557.8 417 65.2
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 8.2e-156 554.3 416 64.4
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 8.2e-156 554.3 416 63.2
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 3.1e-155 552.4 432 62.5
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 3.1e-155 552.4 419 63.2
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 5.3e-155 551.6 415 63.6
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.5e-154 550.1 416 63.0
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 4.5e-154 548.5 416 63.0
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 7.7e-154 547.7 415 64.1
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 2.2e-153 546.2 400 65.8
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 1.4e-152 543.5 419 63.7
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 1.9e-152 543.1 411 62.8
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 5.5e-152 541.6 424 62.0
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 9.4e-152 540.8 423 61.9
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.6e-151 540.0 408 64.5
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 1.6e-151 540.0 403 64.5
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 1.6e-151 540.0 424 61.6
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 4.7e-151 538.5 401 62.6
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 2.3e-150 536.2 417 63.5
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 5.2e-150 535.0 414 62.8
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 1.1e-149 533.9 411 62.5
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 7.4e-149 531.2 414 63.0
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 3.7e-148 528.9 417 62.1
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 4.8e-148 528.5 408 62.7
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 1.4e-147 526.9 414 60.9
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 2.4e-147 526.2 400 63.0
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 2.4e-147 526.2 400 62.2
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 9.1e-147 524.2 413 60.0
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 1.6e-146 523.5 414 60.1
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 2.6e-146 522.7 431 59.4
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 4.5e-146 521.9 419 60.6
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 5.9e-146 521.5 429 59.7
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 7.7e-146 521.2 420 60.0
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 1.3e-145 520.4 418 61.5
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 2.9e-145 519.2 428 59.8
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 6.5e-145 518.1 418 61.0
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 3.2e-144 515.8 415 60.5
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 5.5e-144 515.0 401 63.3
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 3.6e-143 512.3 447 58.4
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 1.0e-142 510.8 427 56.9
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 8.8e-142 507.7 413 60.3
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 5.7e-141 505.0 399 59.9
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 2.8e-140 502.7 419 58.7
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 2.8e-140 502.7 420 57.6
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 4.8e-140 501.9 298 83.2
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 6.3e-140 501.5 401 59.9
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 6.3e-140 501.5 415 58.3
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 6.3e-140 501.5 415 58.3
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.1e-139 500.7 421 58.4
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.4e-139 500.4 438 57.3
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 2.0e-138 496.5 412 57.5
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 2.0e-138 496.5 407 58.0
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 2.7e-138 496.1 401 58.9
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 5.9e-138 495.0 368 63.3
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.7e-137 493.4 419 56.8
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.7e-137 493.4 407 57.5
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 3.2e-136 489.2 424 55.7
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 1.0e-134 484.2 427 56.9
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 1.4e-134 483.8 417 58.3
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 4.4e-133 478.8 397 57.9
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 9.1e-131 471.1 378 58.5
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 9.1e-131 471.1 416 56.7
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 3.8e-129 465.7 401 55.9
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 5.0e-129 465.3 414 54.8
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 1.9e-128 463.4 404 55.9
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 2.0e-125 453.4 415 56.6
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 4.1e-123 445.7 377 57.0
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 2.7e-122 443.0 420 52.9
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 2.7e-122 443.0 442 51.6
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 4.5e-122 442.2 401 55.1
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 4.5e-122 442.2 414 53.4
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 1.7e-121 440.3 366 59.8
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 8.3e-116 421.4 378 56.3
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 3.3e-112 409.5 296 64.9
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 3.4e-109 399.4 357 56.6
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 4.9e-108 395.6 296 62.8
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 4.7e-103 379.0 286 60.8
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 1.1e-102 377.9 366 51.9
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 1.1e-94 351.3 436 43.8
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 6.0e-90 335.5 412 44.9
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 6.1e-58 229.2 301 42.9
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 6.1e-58 229.2 279 46.6
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 7.7e-53 212.2 395 37.7
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 6.1e-50 202.6 124 72.6
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 6.9e-46 189.1 526 28.7
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 2.8e-39 167.2 198 45.5
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 2.0e-32 144.4 107 62.6
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 3.1e-30 137.1 497 27.0
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 5.4e-22 109.8 274 28.5
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 2.2e-20 104.4 94 56.4
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 3.0e-17 94.0 97 49.5
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.4e-14 85.1 63 60.3
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 2.3e-09 67.8 44 68.2
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 9.2e-06 55.8 41 53.7


User provided reference genes

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