Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p48960 Brassica napus HOM05D008271 ORTHO05D032231 1.8e-101 372.5 176 100.0
BolC7t45404H Brassica oleracea HOM05D008271 ORTHO05D032231 1.8e-101 372.5 176 100.0
BcaC06g33575 Brassica carinata HOM05D008271 ORTHO05D032231 2.2e-86 322.4 150 99.3
BraA03t14157Z Brassica rapa HOM05D008271 ORTHO05D010809 1.9e-34 149.8 85 83.5
A03p50650 Brassica napus HOM05D008271 ORTHO05D010809 9.5e-34 147.5 85 82.4
Sp7g16400 Schrenkiella parvula HOM05D008271 ORTHO05D010809 1.2e-31 140.6 86 77.9
BcaB04g17694 Brassica carinata HOM05D008271 ORTHO05D010809 2.2e-30 136.3 85 76.5
Sp7g16410 Schrenkiella parvula HOM05D008271 ORTHO05D010809 7.8e-28 127.9 86 73.3
C07p49040 Brassica napus HOM05D008271 ORTHO05D010809 1.0e-27 127.5 58 93.1
BraA03t14154Z Brassica rapa HOM05D008271 ORTHO05D010809 5.1e-27 125.2 61 90.2
AL7G36860 Arabidopsis lyrata HOM05D008271 ORTHO05D010809 4.3e-26 122.1 85 67.1
AT4G17718 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 1.4e-24 117.1 85 65.9
BcaNung04039 Brassica carinata HOM05D008271 ORTHO05D010809 2.6e-23 112.8 84 65.5
BcaC06g33578 Brassica carinata HOM05D008271 ORTHO05D010809 2.7e-20 102.8 84 61.9
C07p49000 Brassica napus HOM05D008271 ORTHO05D010809 2.7e-20 102.8 84 61.9
BolC7t45408H Brassica oleracea HOM05D008271 ORTHO05D010809 2.7e-20 102.8 84 61.9
BcaC06g33576 Brassica carinata HOM05D008271 ORTHO05D010809 7.8e-20 101.3 84 60.7
C07p49020 Brassica napus HOM05D008271 ORTHO05D010809 1.3e-19 100.5 85 60.0
BolC7t45406H Brassica oleracea HOM05D008271 ORTHO05D010809 1.3e-19 100.5 84 59.5
BolC7t45411H Brassica oleracea HOM05D008271 ORTHO05D010809 1.3e-19 100.5 85 60.0
C07p48970 Brassica napus HOM05D008271 ORTHO05D010809 3.9e-19 99.0 84 59.5
C07p48980 Brassica napus HOM05D008271 ORTHO05D010809 3.9e-19 99.0 84 59.5
BolC7t45405H Brassica oleracea HOM05D008271 ORTHO05D010809 3.9e-19 99.0 84 59.5
Carub.0007s2365 Capsella rubella HOM05D008271 ORTHO05D010809 5.1e-19 98.6 90 54.4
BolC7t45407H Brassica oleracea HOM05D008271 ORTHO05D010809 1.9e-18 96.7 84 58.3
A03p50630 Brassica napus HOM05D008271 ORTHO05D010809 1.6e-17 93.6 84 57.1
BraA03t14155Z Brassica rapa HOM05D008271 ORTHO05D010809 1.6e-17 93.6 84 57.1
BcaC06g33577 Brassica carinata HOM05D008271 ORTHO05D010809 2.1e-17 93.2 84 58.3
Carub.0005s0726 Capsella rubella HOM05D008271 ORTHO05D010809 5.3e-16 88.6 86 51.2
BcaB06g28583 Brassica carinata HOM05D008271 ORTHO05D024079 9.9e-15 84.3 88 50.0
Sp7g16420 Schrenkiella parvula HOM05D008271 ORTHO05D010809 9.9e-15 84.3 85 50.6
AT2G06166 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 2.2e-14 83.2 57 64.9
Carub.0007s2366 Capsella rubella HOM05D008271 ORTHO05D010809 4.9e-14 82.0 85 44.7
BolC3t21245H Brassica oleracea HOM05D001239 ORTHO05D000925 1.1e-13 80.9 103 39.8
BraA06t25024Z Brassica rapa HOM05D008271 ORTHO05D010809 1.9e-13 80.1 85 49.4
A06p19450 Brassica napus HOM05D008271 ORTHO05D010809 2.4e-13 79.7 85 49.4
BolC8t48473H Brassica oleracea HOM05D008271 ORTHO05D010809 2.4e-13 79.7 85 49.4
BolC8t48475H Brassica oleracea HOM05D008271 ORTHO05D010809 2.4e-13 79.7 85 49.4
BraA06t27067Z Brassica rapa HOM05D008271 ORTHO05D010809 2.4e-13 79.7 85 49.4
Thhalv10027032m.g Eutrema salsugineum HOM05D008271 ORTHO05D010809 4.2e-13 79.0 85 45.9
BcaC07g38069 Brassica carinata HOM05D008271 ORTHO05D010809 5.4e-13 78.6 85 49.4
A06p19440 Brassica napus HOM05D008271 ORTHO05D010809 1.6e-12 77.0 85 48.2
BraA06t25023Z Brassica rapa HOM05D008271 ORTHO05D010809 4.6e-12 75.5 85 48.2
BraA09t37089Z Brassica rapa HOM05D001239 ORTHO05D000925 1.9e-10 70.1 103 35.9
C01p11410 Brassica napus HOM05D008271 ORTHO05D024079 2.5e-10 69.7 61 49.2
BolC3t17870H Brassica oleracea HOM05D001239 ORTHO05D000925 5.6e-10 68.6 72 43.1
BolC6t35388H Brassica oleracea HOM05D001239 ORTHO05D000925 7.4e-10 68.2 61 49.2
BraA01t00922Z Brassica rapa HOM05D008271 ORTHO05D024079 1.3e-09 67.4 61 45.9
BcaC09g51616 Brassica carinata HOM05D008271 ORTHO05D024079 4.8e-09 65.5 61 47.5
A03p50640 Brassica napus HOM05D000742 ORTHO05D000924 8.1e-09 64.7 43 65.1
BraA03t14156Z Brassica rapa HOM05D000742 ORTHO05D000924 8.1e-09 64.7 43 65.1
BolC4t21932H Brassica oleracea HOM05D001239 ORTHO05D000925 2.4e-08 63.2 88 37.5
BcaC08g43626 Brassica carinata HOM05D009074 ORTHO05D011606 3.1e-08 62.8 74 45.9
BolC2t12337H Brassica oleracea HOM05D001239 ORTHO05D000925 3.1e-08 62.8 101 35.6
BolC3t21199H Brassica oleracea HOM05D001239 ORTHO05D000925 3.1e-08 62.8 103 36.9
BolC7t40586H Brassica oleracea HOM05D001239 ORTHO05D000925 3.1e-08 62.8 70 40.0
AT4G17713 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 4.0e-08 62.4 87 41.4
BcaC06g33584 Brassica carinata HOM05D008271 ORTHO05D010809 4.0e-08 62.4 41 65.9
BolC6t39320H Brassica oleracea HOM05D001239 ORTHO05D000925 5.3e-08 62.0 105 37.1
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 6.9e-08 61.6 106 34.9
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 1.5e-07 60.5 102 35.3
BraA05t23088Z Brassica rapa HOM05D001239 ORTHO05D000925 2.0e-07 60.1 107 33.6
CARHR181630 Cardamine hirsuta HOM05D008271 ORTHO05D010809 4.5e-07 58.9 85 38.8
Thhalv10023877m.g Eutrema salsugineum HOM05D008271 ORTHO05D010809 4.5e-07 58.9 86 38.4
Aa31LG6G460 Aethionema arabicum HOM05D008271 ORTHO05D010809 9.9e-07 57.8 58 48.3
BraA09t41396Z Brassica rapa HOM05D001239 ORTHO05D000925 9.9e-07 57.8 54 48.1
BraSC39t46220Z Brassica rapa HOM05D001239 ORTHO05D043048 1.3e-06 57.4 104 36.5
BolC5t30858H Brassica oleracea HOM05D001239 ORTHO05D000925 2.2e-06 56.6 62 43.5
BraA03t13628Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-06 56.6 113 35.4
C08p02000 Brassica napus HOM05D001906 ORTHO05D002083 3.8e-06 55.8 103 30.1
BcaC05g30114 Brassica carinata HOM05D001239 ORTHO05D000925 4.9e-06 55.5 54 46.3
BraA01t03685Z Brassica rapa HOM05D001239 ORTHO05D000925 4.9e-06 55.5 121 30.6


User provided reference genes

Program Settings