Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p48650 Brassica napus HOM05D005162 ORTHO05D007064 4.6e-36 154.1 80 100.0
Sp7g16990 Schrenkiella parvula HOM05D005162 ORTHO05D007064 2.8e-25 118.2 66 92.4
BcaNung00113 Brassica carinata HOM05D005162 ORTHO05D007064 3.7e-25 117.9 66 92.4
BcaNung03473 Brassica carinata HOM05D005162 ORTHO05D007064 3.7e-25 117.9 66 92.4
Thhalv10025663m.g Eutrema salsugineum HOM05D005162 ORTHO05D007064 3.7e-25 117.9 66 90.9
BcaC09g50447 Brassica carinata HOM05D005162 ORTHO05D007064 1.4e-24 115.9 66 89.4
A01p20180 Brassica napus HOM05D005162 ORTHO05D007064 1.4e-24 115.9 66 89.4
C01p25320 Brassica napus HOM05D005162 ORTHO05D007064 1.4e-24 115.9 66 89.4
BolC1t02482H Brassica oleracea HOM05D005162 ORTHO05D007064 1.4e-24 115.9 66 89.4
BraA01t01942Z Brassica rapa HOM05D005162 ORTHO05D007064 1.4e-24 115.9 66 89.4
MELO3C011838.2 Cucumis melo HOM05D005162 ORTHO05D007064 2.9e-22 108.2 66 83.3
ClCG11G013410 Citrullus lanatus HOM05D005162 ORTHO05D007064 3.8e-22 107.8 66 81.8
CsaV3_5G029940 Cucumis sativus L. HOM05D005162 ORTHO05D007064 5.0e-22 107.5 66 81.8
CARHR287310 Cardamine hirsuta HOM05D005162 ORTHO05D007064 8.5e-22 106.7 65 83.1
THA.LOC104803191 Tarenaya hassleriana HOM05D005162 ORTHO05D007064 1.4e-21 105.9 65 81.5
PGR042G0281 Punica granatum HOM05D005162 ORTHO05D007064 1.9e-21 105.5 66 80.3
HanXRQChr10g0294681 Helianthus annuus HOM05D005162 ORTHO05D007064 2.5e-21 105.1 66 78.8
AT4G06599 Arabidopsis thaliana HOM05D005162 ORTHO05D007064 3.2e-21 104.8 65 81.5
Carub.0006s2628 Capsella rubella HOM05D005162 ORTHO05D007064 3.2e-21 104.8 65 81.5
Sed0011379 Sechium edule HOM05D005162 ORTHO05D007064 3.2e-21 104.8 66 78.8
AL6G41220 Arabidopsis lyrata HOM05D005162 ORTHO05D007064 5.5e-21 104.0 65 81.5
MBI09_g07124_MAGBIO Magnolia biondii HOM05D005162 ORTHO05D007064 5.5e-21 104.0 66 78.8
Thecc.02G090800 Theobroma cacao HOM05D005162 ORTHO05D007064 5.5e-21 104.0 65 78.5
DCAR_006685 Daucus carota HOM05D005162 ORTHO05D007064 7.2e-21 103.6 66 80.3
Gohir.A03G192500 Gossypium hirsutum HOM05D005162 ORTHO05D007064 9.4e-21 103.2 65 78.5
Potri.004G219300 Populus trichocarpa HOM05D005162 ORTHO05D007064 9.4e-21 103.2 65 76.9
TAR376G0995 Trochodendron aralioides HOM05D005162 ORTHO05D007064 1.2e-20 102.8 66 75.8
Eucgr.G00398 Eucalyptus grandis HOM05D005162 ORTHO05D007064 1.6e-20 102.4 66 75.8
Peaxi162Scf00011g00742 Petunia axillaris HOM05D005162 ORTHO05D007064 1.6e-20 102.4 65 78.5
TWI59G0454 Tripterygium wilfordii HOM05D005162 ORTHO05D007064 2.1e-20 102.1 65 78.5
HPP92_001076 Vanilla planifolia HOM05D005162 ORTHO05D007064 2.1e-20 102.1 66 77.3
MSTRG.16505 Avicennia marina HOM05D005162 ORTHO05D007064 2.7e-20 101.7 66 78.8
Aa31LG3G14040 Aethionema arabicum HOM05D005162 ORTHO05D007064 3.6e-20 101.3 65 80.0
Duzib132G0282 Durio zibethinus HOM05D005162 ORTHO05D007064 3.6e-20 101.3 65 75.4
ECA234G0102 Erigeron canadensis HOM05D005162 ORTHO05D007064 3.6e-20 101.3 65 75.4
SalBow8G3448 Salvia bowleyana HOM05D005162 ORTHO05D007064 3.6e-20 101.3 66 77.3
COL.COLO4_11752 Corchorus olitorius HOM05D005162 ORTHO05D007064 4.7e-20 100.9 65 73.8
Manes.07G021300 Manihot esculenta HOM05D005162 ORTHO05D007064 4.7e-20 100.9 65 73.8
Potri.003G011300 Populus trichocarpa HOM05D005162 ORTHO05D007064 4.7e-20 100.9 65 76.9
Atru.chr6.699 Acer truncatum HOM05D005162 ORTHO05D007064 6.1e-20 100.5 65 75.4
Gohir.D02G213500 Gossypium hirsutum HOM05D005162 ORTHO05D007064 6.1e-20 100.5 65 76.9
Gorai.005G241400 Gossypium raimondii HOM05D005162 ORTHO05D007064 6.1e-20 100.5 65 76.9
Solyc01g103850.4 Solanum lycopersicum HOM05D005162 ORTHO05D007064 6.1e-20 100.5 65 78.5
Sopen01g046230 Solanum pennellii HOM05D005162 ORTHO05D007064 6.1e-20 100.5 65 78.5
PGSC0003DMG400024901 Solanum tuberosum HOM05D005162 ORTHO05D007064 6.1e-20 100.5 65 78.5
Aqoxy6G00135 Aquilegia oxysepala HOM05D005162 ORTHO05D007064 7.9e-20 100.1 65 72.3
CSS0000837 Camellia sinensis var. sinensis HOM05D005162 ORTHO05D007064 1.0e-19 99.8 66 71.2
CSS0029208 Camellia sinensis var. sinensis HOM05D005162 ORTHO05D007064 1.0e-19 99.8 66 71.2
Lsat_1_v5_gn_5_105901 Lactuca sativa HOM05D005162 ORTHO05D007064 1.0e-19 99.8 65 75.4
Cc02_g22900 Coffea canephora HOM05D005162 ORTHO05D007064 1.4e-19 99.4 66 75.8
PSO170G6393 Papaver somniferum HOM05D005162 ORTHO05D007064 1.8e-19 99.0 67 77.6
Ciclev10001794m.g Citrus clementina HOM05D005162 ORTHO05D007064 2.3e-19 98.6 65 72.3
Sabra03G0006800 Salix brachista HOM05D005162 ORTHO05D007064 3.9e-19 97.8 65 73.8
Sabra03G0007400 Salix brachista HOM05D005162 ORTHO05D007064 3.9e-19 97.8 65 73.8
Nn5g27579 Nelumbo nucifera HOM05D005162 ORTHO05D007064 1.1e-18 96.3 66 69.7
Sc07g0004980 Simmondsia chinensis HOM05D005162 ORTHO05D007064 2.6e-18 95.1 66 77.3
Lalb_Chr07g0185841 Lupinus albus HOM05D005162 ORTHO05D007064 3.3e-18 94.7 65 72.3
CANSAT54G0278 Cannabis sativa HOM05D005162 ORTHO05D007064 4.4e-18 94.4 66 74.2
arahy.Tifrunner.gnm1.ann1.R3RHS8 Arachis hypogaea HOM05D005162 ORTHO05D007064 5.7e-18 94.0 66 69.7
arahy.Tifrunner.gnm1.ann1.3Y07W7 Arachis hypogaea HOM05D005162 ORTHO05D007064 7.4e-18 93.6 66 69.7
Prupe.1G576000 Prunus persica HOM05D005162 ORTHO05D007064 9.7e-18 93.2 66 74.2
EL10Ac6g13975 Beta vulgaris HOM05D005162 ORTHO05D007064 1.3e-17 92.8 66 72.7
CDE08G1585 Ceratophyllum demersum HOM05D005162 ORTHO05D007064 1.3e-17 92.8 66 60.6
Cpa.g.sc38.29 Carica papaya HOM05D005162 ORTHO05D007064 1.7e-17 92.4 65 69.2
AUR62041110 Chenopodium quinoa HOM05D005162 ORTHO05D007064 2.2e-17 92.0 66 72.7
FAN13G0306 Fragaria x ananassa HOM05D005162 ORTHO05D007064 1.1e-16 89.7 66 71.2
CiPaw.05G051000 Carya illinoinensis HOM05D005162 ORTHO05D007064 1.4e-16 89.4 66 66.7
FvH4_5g28710 Fragaria vesca HOM05D005162 ORTHO05D007064 1.4e-16 89.4 66 71.2
FvH4_6g22010 Fragaria vesca HOM05D005162 ORTHO05D007064 1.4e-16 89.4 66 71.2
FAN14G4428 Fragaria x ananassa HOM05D005162 ORTHO05D007064 1.4e-16 89.4 66 71.2
FAN18G1533 Fragaria x ananassa HOM05D005162 ORTHO05D007064 1.4e-16 89.4 66 71.2
Glyma.08G126400 Glycine max HOM05D005162 ORTHO05D007064 1.4e-16 89.4 65 67.7
FvH4_1g28920 Fragaria vesca HOM05D005162 ORTHO05D012874 1.8e-16 89.0 66 69.7
EL10Ac9g22557 Beta vulgaris HOM05D005162 ORTHO05D007064 2.4e-16 88.6 63 73.0
FAN08G0254 Fragaria x ananassa HOM05D005162 ORTHO05D007064 2.4e-16 88.6 66 71.2
SGA_v2.0_scaffold338G49226 Striga asiatica HOM05D005162 ORTHO05D007064 2.4e-16 88.6 65 69.2
ATR1134G078 Amborella trichopoda HOM05D005162 ORTHO05D007064 3.1e-16 88.2 67 70.1
Glyma.05G168000 Glycine max HOM05D005162 ORTHO05D007064 3.1e-16 88.2 65 67.7
Cfa005485 Carpinus fangiana HOM05D005162 ORTHO05D007064 4.1e-16 87.8 66 69.7
Ah.03g137150 Amaranthus hybridus HOM05D005162 ORTHO05D007064 7.0e-16 87.0 66 69.7
VMungo0251G3523 Vigna mungo HOM05D005162 ORTHO05D007064 7.0e-16 87.0 65 64.6
FAN04G0484 Fragaria x ananassa HOM05D005162 ORTHO05D007064 9.1e-16 86.7 66 69.7
RcHm_v2.0_Chr7g0220871 Rosa chinensis HOM05D005162 ORTHO05D007064 9.1e-16 86.7 66 68.2
FAN06G2257 Fragaria x ananassa HOM05D005162 ORTHO05D007064 1.2e-15 86.3 66 69.7
FAN06G4878 Fragaria x ananassa HOM05D005162 ORTHO05D007064 1.2e-15 86.3 66 69.7
Lsat_1_v5_gn_1_60880 Lactuca sativa HOM05D005162 ORTHO05D007064 2.0e-15 85.5 65 67.7
Phvul.002G248400 Phaseolus vulgaris HOM05D005162 ORTHO05D007064 2.0e-15 85.5 65 63.1
FvH4_7g16790 Fragaria vesca HOM05D005162 ORTHO05D007064 4.5e-15 84.3 66 68.2
QL02p099940 Quercus lobata HOM05D005162 ORTHO05D007064 4.5e-15 84.3 66 62.1
Lj4g0017883 Lotus japonicus HOM05D005162 ORTHO05D007064 5.9e-15 84.0 65 61.5
Sabra01G0166400 Salix brachista HOM05D005162 ORTHO05D007064 5.9e-15 84.0 101 49.5
MD15G1431000 Malus domestica HOM05D005162 ORTHO05D007064 1.0e-14 83.2 66 66.7
Psat7g063440 Pisum sativum HOM05D005162 ORTHO05D007064 1.0e-14 83.2 68 63.2
Rhsim11G0126200 Rhododendron simsii HOM05D005162 ORTHO05D007064 1.0e-14 83.2 109 45.9
unitig_749.g14130 Utricularia gibba HOM05D005162 ORTHO05D007064 1.0e-14 83.2 65 64.6
Dinv01848 Davidia involucrata HOM05D005162 ORTHO05D007064 5.0e-14 80.9 49 79.6
Ca_17836_v3 Cicer arietinum L. HOM05D005162 ORTHO05D007064 8.5e-14 80.1 68 63.2
TPR.G6800 Trifolium pratense HOM05D005162 ORTHO05D007064 1.5e-13 79.3 68 60.3
Medtr8g088640 Medicago truncatula HOM05D005162 ORTHO05D007064 2.5e-13 78.6 68 60.3
Migut.B00805 Erythranthe guttata HOM05D005162 ORTHO05D007064 5.5e-13 77.4 66 60.6
Nitab4.5_0000948g0210 Nicotiana tabacum HOM05D005162 ORTHO05D007064 5.5e-13 77.4 102 47.1
CsaV3_5G029930 Cucumis sativus L. HOM05D005162 ORTHO05D007064 7.2e-13 77.0 66 62.1
FAN09G4282 Fragaria x ananassa HOM05D005162 ORTHO05D007064 9.4e-13 76.6 66 63.6
CDE08G1137 Ceratophyllum demersum HOM05D005162 ORTHO05D007064 2.1e-12 75.5 66 50.0
Haze_01819 Corylus avellana HOM05D005162 ORTHO05D007064 2.7e-12 75.1 89 50.6
SMO358G0515 Selaginella moellendorffii HOM05D005162 ORTHO05D007064 2.7e-12 75.1 65 55.4
Mapoly0019s0035 Marchantia polymorpha HOM05D005162 ORTHO05D007064 5.2e-11 70.9 65 53.8
Sabra03G0007100 Salix brachista HOM05D005162 ORTHO05D007064 5.2e-11 70.9 111 40.5
Os01g0875400 Oryza sativa ssp. japonica HOM05D005162 ORTHO05D007064 2.6e-10 68.6 66 54.5
Pp3c1_27970 Physcomitrium patens HOM05D005162 ORTHO05D007064 3.3e-10 68.2 65 49.2
Actinidia39017 Actinidia chinensis HOM05D005162 ORTHO05D007064 4.4e-10 67.8 46 67.4
AagrBONN_evm.TU.Sc2ySwM_368.1617 Anthoceros agrestis HOM05D005162 ORTHO05D007064 5.7e-10 67.4 66 48.5
Zm00001eb366430 Zea mays HOM05D005162 ORTHO05D007064 9.1e-08 60.1 65 49.2
FvH4_7g16160 Fragaria vesca HOM05D005162 ORTHO05D007064 5.9e-07 57.4 46 65.2


User provided reference genes

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