Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 1.9e-175 619.0 301 100.0
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 3.4e-172 608.2 303 98.3
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 3.4e-172 608.2 303 98.3
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 1.9e-170 602.4 302 98.7
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 4.1e-170 601.3 304 97.4
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 2.0e-169 599.0 303 96.4
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 3.0e-168 595.1 303 95.7
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 3.6e-166 588.2 303 94.4
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 1.1e-165 586.6 302 94.7
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 1.1e-162 576.6 301 93.0
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 9.2e-162 573.5 301 93.7
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 2.1e-161 572.4 301 92.0
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 7.8e-161 570.5 301 91.7
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 1.0e-160 570.1 301 91.4
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 1.0e-160 570.1 301 91.0
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 8.6e-160 567.0 302 92.7
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 1.2e-156 556.6 289 94.5
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 7.1e-146 520.8 300 83.7
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 2.3e-144 515.8 314 84.1
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 3.6e-142 508.4 302 85.8
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 3.6e-142 508.4 302 85.8
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.1e-138 496.9 280 83.9
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.9e-138 496.1 299 80.6
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 9.3e-138 493.8 280 83.2
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 2.1e-137 492.7 301 79.4
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 2.1e-137 492.7 280 82.9
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 1.8e-136 489.6 300 79.0
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 6.7e-136 487.6 303 77.2
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 9.6e-135 483.8 297 76.8
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 2.8e-134 482.3 297 77.1
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 3.7e-134 481.9 325 76.0
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 6.2e-134 481.1 300 76.0
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 6.2e-134 481.1 279 80.6
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 6.2e-134 481.1 293 78.2
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 8.1e-134 480.7 285 78.2
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 1.8e-133 479.6 296 77.4
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 9.0e-133 477.2 301 75.4
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 1.2e-132 476.9 296 76.7
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 1.2e-132 476.9 297 77.8
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 2.0e-132 476.1 298 75.5
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 3.4e-132 475.3 297 75.4
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 4.5e-132 474.9 308 75.6
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 9.9e-132 473.8 306 73.2
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 1.3e-131 473.4 298 75.8
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 1.3e-131 473.4 284 77.1
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 1.3e-131 473.4 306 73.5
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 1.7e-131 473.0 301 76.7
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 1.7e-131 473.0 298 74.8
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 6.4e-131 471.1 302 73.5
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 1.1e-130 470.3 299 74.9
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 1.1e-130 470.3 303 75.6
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 1.4e-130 469.9 293 77.1
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 3.2e-130 468.8 296 76.0
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 9.3e-130 467.2 301 74.4
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 9.3e-130 467.2 297 75.8
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 1.2e-129 466.8 299 73.9
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 1.6e-129 466.5 296 74.7
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 3.5e-129 465.3 294 74.8
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 6.0e-129 464.5 296 73.3
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 6.0e-129 464.5 296 76.7
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 1.8e-128 463.0 302 73.2
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 5.1e-128 461.5 290 76.9
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 5.1e-128 461.5 279 79.2
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 8.7e-128 460.7 301 74.1
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 1.1e-127 460.3 283 76.3
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 2.5e-127 459.1 293 74.7
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 4.3e-127 458.4 294 74.8
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 4.3e-127 458.4 260 83.1
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 9.6e-127 457.2 291 75.9
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 9.6e-127 457.2 302 72.5
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 6.2e-126 454.5 296 72.0
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 2.4e-125 452.6 315 71.4
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 3.1e-125 452.2 304 71.4
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 5.3e-125 451.4 299 74.6
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 2.6e-124 449.1 301 69.8
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 1.3e-123 446.8 285 75.4
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 4.9e-123 444.9 284 75.4
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 4.9e-123 444.9 300 70.0
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 6.5e-123 444.5 294 72.8
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 8.4e-123 444.1 301 71.4
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 1.1e-122 443.7 282 74.5
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 1.1e-122 443.7 301 69.8
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 1.1e-122 443.7 303 71.0
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 2.5e-122 442.6 301 71.1
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 5.5e-122 441.4 292 70.5
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 3.5e-121 438.7 309 68.6
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 4.3e-119 431.8 300 69.3
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 9.7e-119 430.6 400 56.8
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 2.6e-116 422.5 303 68.0
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 4.5e-116 421.8 280 71.8
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 6.5e-115 417.9 296 68.9
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 5.7e-111 404.8 295 67.8
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 9.7e-111 404.1 265 73.2
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 2.2e-110 402.9 272 70.6
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 5.0e-107 391.7 246 76.8
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 1.4e-106 390.2 239 76.6
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 3.2e-106 389.0 296 66.2
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 8.2e-102 374.4 301 61.8
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 8.5e-99 364.4 249 70.7
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 2.5e-98 362.8 212 82.5
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 2.1e-97 359.8 316 57.3
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 7.4e-95 351.3 211 80.6
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.7e-91 340.1 282 62.1
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.1e-90 337.4 202 78.2
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.5e-90 337.0 202 77.2
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 1.8e-88 330.1 243 69.1
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 8.8e-88 327.8 257 66.1
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 9.5e-74 281.2 294 52.0
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 3.7e-70 269.2 269 50.2
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 5.9e-68 261.9 194 66.0
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 2.8e-65 253.1 258 48.4
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 1.4e-64 250.8 270 52.6
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 2.0e-55 220.3 270 49.3
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 1.1e-53 214.5 262 45.4
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 1.9e-53 213.8 169 62.7
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 6.6e-51 205.3 128 73.4
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.3e-46 191.0 146 67.1
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 5.6e-42 175.6 108 79.6
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 6.2e-41 172.2 97 83.5
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 1.1e-37 161.4 162 56.2
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 1.0e-35 154.8 100 73.0
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.6e-33 147.5 81 80.2
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 3.5e-28 129.8 66 81.8
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 1.5e-15 87.8 56 73.2
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 3.4e-15 86.7 67 62.7
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 6.9e-08 62.4 57 59.6
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 1.2e-07 61.6 33 78.8
Cpa.g.sc3814.1 Carica papaya HOM05D006150 ORTHO05D007745 1.5e-07 61.2 35 74.3
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.0e-06 58.5 37 78.4
A06p15030 Brassica napus HOM05D006150 ORTHO05D096911 6.5e-06 55.8 41 73.2


User provided reference genes

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