Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p48380 Brassica napus HOM05D000274 ORTHO05D001466 2.0e-72 275.8 151 100.0
BcaC06g33539 Brassica carinata HOM05D000274 ORTHO05D001466 4.9e-63 244.6 135 98.5
C07p48450 Brassica napus HOM05D000274 ORTHO05D001466 4.9e-63 244.6 135 98.5
C07p48510 Brassica napus HOM05D000274 ORTHO05D001466 7.9e-61 237.3 135 97.0
BolC7t45359H Brassica oleracea HOM05D000274 ORTHO05D001466 7.9e-61 237.3 135 97.0
BraA03t14116Z Brassica rapa HOM05D000274 ORTHO05D001466 1.9e-59 232.6 136 94.9
A03p50270 Brassica napus HOM05D000274 ORTHO05D001466 3.3e-59 231.9 136 94.9
BcaNung04655 Brassica carinata HOM05D000274 ORTHO05D001466 1.3e-58 229.9 136 94.1
AL7G37670 Arabidopsis lyrata HOM05D000274 ORTHO05D001466 6.2e-58 227.6 135 94.1
BcaNung00131 Brassica carinata HOM05D000274 ORTHO05D001466 6.2e-58 227.6 135 92.6
BraA01t01954Z Brassica rapa HOM05D000274 ORTHO05D001466 6.2e-58 227.6 135 93.3
A01p20270 Brassica napus HOM05D000274 ORTHO05D001466 1.1e-57 226.9 135 92.6
Thhalv10025815m.g Eutrema salsugineum HOM05D000274 ORTHO05D001466 5.3e-57 224.6 135 91.9
BolC1t02494H Brassica oleracea HOM05D000274 ORTHO05D001466 9.0e-57 223.8 135 91.9
Carub.0007s2438 Capsella rubella HOM05D000274 ORTHO05D001466 1.2e-56 223.4 135 91.9
AT4G17040 Arabidopsis thaliana HOM05D000274 ORTHO05D001466 1.5e-56 223.0 135 92.6
Sp7g17150 Schrenkiella parvula HOM05D000274 ORTHO05D001466 7.6e-56 220.7 135 92.6
CARHR223600 Cardamine hirsuta HOM05D000274 ORTHO05D001466 1.7e-55 219.5 135 91.1
BcaC09g50438 Brassica carinata HOM05D000274 ORTHO05D001466 6.4e-55 217.6 137 89.8
C01p25420 Brassica napus HOM05D000274 ORTHO05D001466 6.4e-55 217.6 137 89.8
Aa31LG2G13120 Aethionema arabicum HOM05D000274 ORTHO05D001466 4.2e-54 214.9 135 88.1
THA.LOC104814704 Tarenaya hassleriana HOM05D000274 ORTHO05D001466 1.5e-35 153.3 103 82.5
FAN13G1591 Fragaria x ananassa HOM05D000274 ORTHO05D001466 1.8e-33 146.4 136 66.2
RcHm_v2.0_Chr7g0205411 Rosa chinensis HOM05D000274 ORTHO05D001466 1.2e-32 143.7 135 64.4
FvH4_5g20310 Fragaria vesca HOM05D000274 ORTHO05D001466 2.0e-32 142.9 135 64.4
FAN08G3601 Fragaria x ananassa HOM05D000274 ORTHO05D001466 2.0e-32 142.9 135 63.7
FAN18G4086 Fragaria x ananassa HOM05D001114 ORTHO05D000940 2.0e-32 142.9 135 64.4
Gorai.008G231300 Gossypium raimondii HOM05D000274 ORTHO05D001466 2.6e-32 142.5 140 65.0
Gohir.A12G213200 Gossypium hirsutum HOM05D000274 ORTHO05D001466 4.5e-32 141.7 141 65.2
FAN04G2336 Fragaria x ananassa HOM05D000274 ORTHO05D001466 5.9e-32 141.4 136 64.0
Sabra03G0054000 Salix brachista HOM05D000274 ORTHO05D001466 5.9e-32 141.4 140 62.1
Thecc.03G241700 Theobroma cacao HOM05D000274 ORTHO05D001466 5.9e-32 141.4 137 64.2
ClCG10G002260 Citrullus lanatus HOM05D000274 ORTHO05D001466 1.0e-31 140.6 136 66.2
Gohir.D12G215700 Gossypium hirsutum HOM05D000274 ORTHO05D001466 1.0e-31 140.6 141 65.2
Potri.003G083300 Populus trichocarpa HOM05D000274 ORTHO05D001466 1.7e-31 139.8 139 63.3
Prupe.5G057800 Prunus persica HOM05D000274 ORTHO05D001466 2.2e-31 139.4 130 62.3
BcaC07g38032 Brassica carinata HOM05D000274 ORTHO05D001466 2.9e-31 139.0 89 82.0
Sed0022950 Sechium edule HOM05D000274 ORTHO05D001466 2.9e-31 139.0 144 59.7
Dinv21696 Davidia involucrata HOM05D000274 ORTHO05D001666 6.5e-31 137.9 136 63.2
MD06G1047500 Malus domestica HOM05D000274 ORTHO05D001466 1.9e-30 136.3 130 61.5
MELO3C013900.2 Cucumis melo HOM05D000274 ORTHO05D001466 9.4e-30 134.0 135 62.2
COL.COLO4_07195 Corchorus olitorius HOM05D000274 ORTHO05D001466 1.2e-29 133.7 138 61.6
CsaV3_3G002300 Cucumis sativus L. HOM05D000274 ORTHO05D001466 1.2e-29 133.7 135 61.5
Dinv28872 Davidia involucrata HOM05D000274 ORTHO05D001466 1.2e-29 133.7 136 62.5
Sc01g0008010 Simmondsia chinensis HOM05D000274 ORTHO05D001466 1.2e-29 133.7 135 59.3
Duzib084G1330 Durio zibethinus HOM05D000274 ORTHO05D001466 2.1e-29 132.9 98 71.4
AUR62007162 Chenopodium quinoa HOM05D000274 ORTHO05D001466 2.7e-29 132.5 133 60.2
CSS0001200 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D001466 3.6e-29 132.1 111 68.5
Nitab4.5_0003567g0030 Nicotiana tabacum HOM05D000274 ORTHO05D001466 3.6e-29 132.1 113 66.4
arahy.Tifrunner.gnm1.ann1.A1E252 Arachis hypogaea HOM05D000274 ORTHO05D001466 4.6e-29 131.7 139 59.7
MSTRG.12147 Avicennia marina HOM05D000274 ORTHO05D001466 6.1e-29 131.3 125 59.2
AUR62018844 Chenopodium quinoa HOM05D000274 ORTHO05D001466 7.9e-29 131.0 100 71.0
Nn6g33770 Nelumbo nucifera HOM05D000274 ORTHO05D001466 7.9e-29 131.0 135 58.5
Nitab4.5_0000500g0200 Nicotiana tabacum HOM05D000274 ORTHO05D001466 7.9e-29 131.0 113 65.5
Atru.chr9.1216 Acer truncatum HOM05D000274 ORTHO05D001466 1.0e-28 130.6 139 61.2
MD04G1052700 Malus domestica HOM05D000274 ORTHO05D001466 1.0e-28 130.6 136 60.3
unitig_0.g1050 Utricularia gibba HOM05D000274 ORTHO05D001466 1.8e-28 129.8 93 73.1
arahy.Tifrunner.gnm1.ann1.V1Q6DD Arachis hypogaea HOM05D000274 ORTHO05D001466 2.3e-28 129.4 144 58.3
HanXRQChr13g0418241 Helianthus annuus HOM05D000274 ORTHO05D001466 3.0e-28 129.0 100 73.0
Oeu028058.1 Olea europaea HOM05D000274 ORTHO05D001466 3.0e-28 129.0 99 70.7
TAR629G1522 Trochodendron aralioides HOM05D000274 ORTHO05D001466 3.0e-28 129.0 115 62.6
EL10Ac5g12277 Beta vulgaris HOM05D000274 ORTHO05D001466 3.9e-28 128.6 133 57.9
CiPaw.11G078700 Carya illinoinensis HOM05D000274 ORTHO05D001466 5.1e-28 128.3 100 70.0
CiPaw.12G053200 Carya illinoinensis HOM05D000274 ORTHO05D001466 5.1e-28 128.3 135 57.8
Lalb_Chr05g0220941 Lupinus albus HOM05D000274 ORTHO05D001466 8.8e-28 127.5 136 61.8
DCAR_005583 Daucus carota HOM05D000274 ORTHO05D001466 1.1e-27 127.1 139 60.4
Glyma.17G147700 Glycine max HOM05D000274 ORTHO05D001466 1.1e-27 127.1 137 59.9
Cfa012676 Carpinus fangiana HOM05D000274 ORTHO05D001466 2.0e-27 126.3 131 61.8
Ah.07g199220 Amaranthus hybridus HOM05D000274 ORTHO05D001466 2.6e-27 125.9 132 60.6
Lalb_Chr09g0329811 Lupinus albus HOM05D000274 ORTHO05D001466 2.6e-27 125.9 136 62.5
MBI04_g13851_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D001466 3.3e-27 125.6 137 58.4
VMungo0251G0885 Vigna mungo HOM05D000274 ORTHO05D001466 3.3e-27 125.6 136 58.8
Glyma.05G065900 Glycine max HOM05D000274 ORTHO05D001466 4.4e-27 125.2 136 59.6
Peaxi162Scf00301g00317 Petunia axillaris HOM05D000274 ORTHO05D001466 4.4e-27 125.2 108 63.9
Phvul.003G224900 Phaseolus vulgaris HOM05D000274 ORTHO05D001466 4.4e-27 125.2 136 58.8
QL12p008827 Quercus lobata HOM05D000274 ORTHO05D001466 4.4e-27 125.2 167 50.9
Migut.A01054 Erythranthe guttata HOM05D000274 ORTHO05D001466 5.7e-27 124.8 99 70.7
Eucgr.E00356 Eucalyptus grandis HOM05D000274 ORTHO05D001466 9.7e-27 124.0 137 58.4
Nn1g00773 Nelumbo nucifera HOM05D000274 ORTHO05D001466 9.7e-27 124.0 137 58.4
ATR0665G415 Amborella trichopoda HOM05D000274 ORTHO05D001466 1.3e-26 123.6 99 66.7
PGR042G1589 Punica granatum HOM05D000274 ORTHO05D001466 1.3e-26 123.6 136 56.6
TAR636G0346 Trochodendron aralioides HOM05D000274 ORTHO05D001466 1.3e-26 123.6 129 57.4
Haze_07969 Corylus avellana HOM05D000274 ORTHO05D001466 1.7e-26 123.2 131 61.1
HanXRQChr03g0089781 Helianthus annuus HOM05D000274 ORTHO05D001466 1.7e-26 123.2 139 59.7
GSVIVG01003696001 Vitis vinifera HOM05D000274 ORTHO05D001466 6.3e-26 121.3 100 66.0
SalBow6G2265 Salvia bowleyana HOM05D000274 ORTHO05D001466 8.2e-26 120.9 96 69.8
Ciclev10021423m.g Citrus clementina HOM05D000274 ORTHO05D001466 1.4e-25 120.2 135 52.6
PSO782G4363 Papaver somniferum HOM05D000274 ORTHO05D001466 1.4e-25 120.2 135 54.8
PSO063G3546 Papaver somniferum HOM05D000274 ORTHO05D001466 5.3e-25 118.2 135 54.1
CAN.G572.5 Capsicum annuum HOM05D000274 ORTHO05D001466 9.1e-25 117.5 102 62.7
Medtr4g099360 Medicago truncatula HOM05D000274 ORTHO05D001466 9.1e-25 117.5 136 58.1
Lsat_1_v5_gn_6_95101 Lactuca sativa HOM05D000274 ORTHO05D001466 2.0e-24 116.3 84 76.2
Lj4g0022616 Lotus japonicus HOM05D000274 ORTHO05D001466 2.0e-24 116.3 138 55.8
Manes.01G087900 Manihot esculenta HOM05D000274 ORTHO05D001466 5.9e-24 114.8 138 55.1
Ca_22011_v3 Cicer arietinum L. HOM05D000274 ORTHO05D001466 1.0e-23 114.0 136 54.4
Ah.12g054010 Amaranthus hybridus HOM05D000274 ORTHO05D001466 1.7e-23 113.2 170 50.0
Cc08_g11370 Coffea canephora HOM05D000274 ORTHO05D001466 1.7e-23 113.2 138 55.8
BcaB04g18389 Brassica carinata HOM05D000274 ORTHO05D001466 2.2e-23 112.8 78 74.4
Psat4g075600 Pisum sativum HOM05D000274 ORTHO05D001466 2.2e-23 112.8 136 53.7
TPR.G17117 Trifolium pratense HOM05D000274 ORTHO05D001466 6.5e-23 111.3 137 53.3
ECA240G3639 Erigeron canadensis HOM05D000274 ORTHO05D001466 8.5e-23 110.9 120 55.8
HPP92_012964 Vanilla planifolia HOM05D000274 ORTHO05D001466 3.2e-22 109.0 138 52.9
Aqoxy3G02665 Aquilegia oxysepala HOM05D000274 ORTHO05D001466 4.2e-22 108.6 153 48.4
CDE02G3772 Ceratophyllum demersum HOM05D000274 ORTHO05D001466 2.1e-21 106.3 84 67.9
PGSC0003DMG401026219 Solanum tuberosum HOM05D000274 ORTHO05D001466 2.1e-21 106.3 121 52.9
Solyc08g077890.3 Solanum lycopersicum HOM05D000274 ORTHO05D001466 1.4e-20 103.6 114 55.3
Sopen08g026400 Solanum pennellii HOM05D000274 ORTHO05D001466 2.3e-20 102.8 121 52.1
SGA_v2.0_scaffold199G41242 Striga asiatica HOM05D000274 ORTHO05D001466 6.7e-20 101.3 95 60.0
Cpa.g.sc643.1 Carica papaya HOM05D000274 ORTHO05D001466 3.3e-19 99.0 142 50.0
Mapoly0074s0079 Marchantia polymorpha HOM05D000274 ORTHO05D001466 7.7e-16 87.8 101 54.5
Pp3c2_27590 Physcomitrium patens HOM05D000274 ORTHO05D001466 7.7e-16 87.8 102 50.0
Pp3c26_8310 Physcomitrium patens HOM05D000274 ORTHO05D001466 1.0e-15 87.4 140 43.6
AagrBONN_evm.TU.Sc2ySwM_228.2521 Anthoceros agrestis HOM05D000274 ORTHO05D001466 2.9e-15 85.9 100 51.0
CSS0029485 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D001466 2.9e-15 85.9 137 50.4
Oeu054284.1 Olea europaea HOM05D000274 ORTHO05D001466 8.5e-15 84.3 46 89.1
CBR_g78793 Chara braunii HOM05D000274 ORTHO05D001466 1.2e-13 80.5 49 75.5
Os01g0271400 Oryza sativa ssp. japonica HOM05D000274 ORTHO05D001466 2.7e-13 79.3 51 72.5
Manes.02G044800 Manihot esculenta HOM05D000274 ORTHO05D001466 1.4e-12 77.0 43 83.7
Gohir.D03G069902 Gossypium hirsutum HOM05D000274 ORTHO05D001466 1.8e-12 76.6 45 80.0
Dinv25118 Davidia involucrata HOM05D000274 ORTHO05D001466 2.0e-11 73.2 99 52.5
Pp3c4_26850 Physcomitrium patens HOM05D000274 ORTHO05D001466 2.0e-11 73.2 128 41.4
SMO234G0015 Selaginella moellendorffii HOM05D000274 ORTHO05D001466 1.7e-10 70.1 45 73.3
CSS0035775 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D001466 2.8e-10 69.3 69 59.4
Actinidia10864 Actinidia chinensis HOM05D000274 ORTHO05D001466 4.1e-09 65.5 141 39.7
MCO01G489 Micromonas commoda HOM05D000274 ORTHO05D001466 2.7e-08 62.8 45 66.7
vmacro14124 Vaccinium macrocarpon HOM05D000274 ORTHO05D001466 4.5e-08 62.0 132 37.9
SGA_v2.0_scaffold850G53669 Striga asiatica HOM05D000274 ORTHO05D001466 1.7e-07 60.1 56 55.4
CDE11G0427 Ceratophyllum demersum HOM05D000274 ORTHO05D001466 2.2e-07 59.7 80 51.2
Medtr6g086515 Medicago truncatula HOM05D000274 ORTHO05D001466 9.4e-06 54.3 35 74.3


User provided reference genes

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