Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p48220 Brassica napus HOM05D000003 ORTHO05D016704 2.4e-50 201.8 98 100.0
BcaC06g30852 Brassica carinata HOM05D000003 ORTHO05D015466 2.4e-34 148.7 98 72.4
BcaNung03952 Brassica carinata HOM05D000003 ORTHO05D016704 2.4e-34 148.7 98 72.4
BcaC06g34691 Brassica carinata HOM05D000003 ORTHO05D001498 2.2e-32 142.1 98 67.3
BcaC08g45717 Brassica carinata HOM05D000003 ORTHO05D016704 3.0e-29 131.7 81 77.8
BolC2t08182H Brassica oleracea HOM05D000003 ORTHO05D016704 1.4e-26 122.9 77 74.0
BcaB06g26736 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-25 118.6 95 62.1
BcaC02g12768 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-24 115.2 98 60.2
BcaC08g46757 Brassica carinata HOM05D000003 ORTHO05D001498 5.0e-24 114.4 98 54.1
BcaC04g24062 Brassica carinata HOM05D000003 ORTHO05D001498 8.5e-24 113.6 98 59.2
BolC7t43105H Brassica oleracea HOM05D000003 ORTHO05D001498 3.2e-23 111.7 98 60.2
BolC1t01124H Brassica oleracea HOM05D000003 ORTHO05D001498 4.2e-23 111.3 94 60.6
BcaC08g43188 Brassica carinata HOM05D000003 ORTHO05D016704 9.4e-23 110.2 93 61.3
BcaB02g10126 Brassica carinata HOM05D000003 ORTHO05D016704 1.2e-22 109.8 98 57.1
BcaB07g32628 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-22 109.4 98 58.2
BcaC02g07192 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-22 109.0 98 58.2
BcaB04g17607 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-21 106.7 94 59.6
BcaB07g32767 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-20 103.2 98 53.1
BcaB07g33879 Brassica carinata HOM05D000003 ORTHO05D015466 2.2e-19 99.0 98 53.1
BcaB03g16045 Brassica carinata HOM05D000003 ORTHO05D001498 4.8e-19 97.8 98 49.0
BcaC03g16475 Brassica carinata HOM05D000003 ORTHO05D016704 6.3e-19 97.4 87 59.8
BcaB02g10097 Brassica carinata HOM05D000003 ORTHO05D001498 8.2e-19 97.1 98 49.0
BcaB02g07030 Brassica carinata HOM05D000003 ORTHO05D015466 1.8e-18 95.9 98 51.0
BraA02t06299Z Brassica rapa HOM05D000003 ORTHO05D016704 1.8e-18 95.9 62 69.4
BcaC01g06159 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-18 94.7 98 54.1
BcaB03g16821 Brassica carinata HOM05D000003 ORTHO05D001498 7.0e-18 94.0 98 48.0
BraA09t38728Z Brassica rapa HOM05D000003 ORTHO05D001498 9.1e-18 93.6 93 52.7
BcaB01g02280 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-17 93.2 98 49.0
BcaC03g18169 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-17 92.4 98 49.0
BcaC08g43351 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-17 91.7 98 49.0
BcaNung05100 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-17 91.7 98 43.9
BcaB02g07356 Brassica carinata HOM05D000003 ORTHO05D001498 4.5e-17 91.3 98 48.0
BcaB04g16926 Brassica carinata HOM05D000003 ORTHO05D001498 7.7e-17 90.5 98 48.0
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-16 90.1 98 45.9
BcaC04g20486 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-16 89.7 98 52.0
BcaC02g09541 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-16 88.2 98 45.9
BcaNung00269 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-16 88.2 98 46.9
BcaB07g33494 Brassica carinata HOM05D000003 ORTHO05D001498 5.0e-16 87.8 98 44.9
BolC5t32877H Brassica oleracea HOM05D000003 ORTHO05D001498 1.1e-15 86.7 98 45.9
BcaB04g19028 Brassica carinata HOM05D000003 ORTHO05D000004 4.2e-15 84.7 98 45.9
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 7.2e-15 84.0 97 45.4
BcaB04g18838 Brassica carinata HOM05D000003 ORTHO05D001498 9.4e-15 83.6 97 46.4
Thhalv10009777m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 6.1e-14 80.9 91 46.2
Thhalv10026817m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 6.8e-13 77.4 91 44.0
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 8.8e-13 77.0 93 46.2
Sp7g03745 Schrenkiella parvula HOM05D000003 ORTHO05D001498 2.6e-12 75.5 93 41.9
BolC2t10194H Brassica oleracea HOM05D000003 ORTHO05D001498 1.3e-11 73.2 76 52.6
BcaC09g49254 Brassica carinata HOM05D000003 ORTHO05D001498 1.7e-11 72.8 95 40.0
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 2.8e-11 72.0 93 40.9
BcaC01g03163 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-11 72.0 36 83.3
BcaC01g01503 Brassica carinata HOM05D000003 ORTHO05D001498 4.8e-11 71.2 91 40.7
BolC7t46481H Brassica oleracea HOM05D000003 ORTHO05D001498 4.8e-11 71.2 95 41.1
BolC4t25304H Brassica oleracea HOM05D000003 ORTHO05D016704 8.3e-11 70.5 71 47.9
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 8.3e-11 70.5 97 37.1
BcaC01g05810 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-10 69.3 88 40.9
BcaC09g51068 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-10 69.3 89 36.0
BraA02t07610Z Brassica rapa HOM05D000003 ORTHO05D001498 2.4e-10 68.9 76 46.1
Sp6g10470 Schrenkiella parvula HOM05D000003 ORTHO05D001498 2.4e-10 68.9 93 36.6
BcaNung03323 Brassica carinata HOM05D000003 ORTHO05D016015 3.1e-10 68.6 95 37.9
BolC3t14078H Brassica oleracea HOM05D000003 ORTHO05D016704 3.1e-10 68.6 98 42.9
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 3.1e-10 68.6 86 36.0
BcaC08g46350 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-10 68.2 93 38.7
C06p40810 Brassica napus HOM05D000003 ORTHO05D001498 4.1e-10 68.2 93 38.7
BolC6t39352H Brassica oleracea HOM05D000003 ORTHO05D001498 4.1e-10 68.2 93 38.7
BcaC04g19633 Brassica carinata HOM05D000003 ORTHO05D001498 5.4e-10 67.8 93 35.5
BcaC05g25363 Brassica carinata HOM05D000003 ORTHO05D001498 7.0e-10 67.4 93 35.5
BcaC07g41849 Brassica carinata HOM05D000003 ORTHO05D027177 7.0e-10 67.4 94 33.0
BcaC08g44324 Brassica carinata HOM05D000003 ORTHO05D001498 9.1e-10 67.0 93 38.7
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-09 66.6 81 42.0
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-09 66.6 93 40.9
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-09 66.6 93 36.6
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-09 66.2 93 41.9
BcaB07g33516 Brassica carinata HOM05D000003 ORTHO05D000004 1.6e-09 66.2 95 34.7
BcaB03g15480 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-09 65.9 93 39.8
BcaC04g19472 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-09 65.9 93 37.6
BcaC05g29352 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-09 65.5 93 34.4
BcaC09g47726 Brassica carinata HOM05D000003 ORTHO05D016043 2.7e-09 65.5 93 34.4
BcaC09g47764 Brassica carinata HOM05D000003 ORTHO05D016043 2.7e-09 65.5 93 34.4
BcaB05g24840 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-09 65.1 91 36.3
BcaB05g24688 Brassica carinata HOM05D000003 ORTHO05D001498 4.5e-09 64.7 77 41.6
BraA10t45387Z Brassica rapa HOM05D000003 ORTHO05D027722 4.5e-09 64.7 93 33.3
C07p15960 Brassica napus HOM05D009133 ORTHO05D016102 5.9e-09 64.3 89 37.1
C07p15980 Brassica napus HOM05D009133 ORTHO05D016102 5.9e-09 64.3 89 37.1
BcaC01g01226 Brassica carinata HOM05D000003 ORTHO05D001498 7.7e-09 63.9 92 34.8
BcaC06g34829 Brassica carinata HOM05D000003 ORTHO05D001498 7.7e-09 63.9 93 34.4
BolC3t21277H Brassica oleracea HOM05D000003 ORTHO05D016043 7.7e-09 63.9 92 34.8
BolC7t42827H Brassica oleracea HOM05D000003 ORTHO05D016043 7.7e-09 63.9 93 34.4
BcaC03g13586 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-08 63.5 93 37.6
BcaC05g27727 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-08 63.5 82 39.0
BolC7t44586H Brassica oleracea HOM05D000003 ORTHO05D016043 1.0e-08 63.5 92 34.8
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 1.3e-08 63.2 93 34.4
BcaC06g34794 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-08 63.2 88 36.4
C07p24620 Brassica napus HOM05D000003 ORTHO05D001498 1.3e-08 63.2 88 36.4
BolC3t16805H Brassica oleracea HOM05D000003 ORTHO05D016043 1.3e-08 63.2 93 33.3
BolC7t42982H Brassica oleracea HOM05D000003 ORTHO05D001498 1.3e-08 63.2 88 36.4
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 1.7e-08 62.8 86 37.2
BraA06t25211Z Brassica rapa HOM05D000003 ORTHO05D001498 1.7e-08 62.8 86 37.2
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 1.7e-08 62.8 86 37.2
BcaC05g24575 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-08 62.0 93 36.6
BcaC06g35891 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-08 62.0 86 36.0
C02p54220 Brassica napus HOM05D009133 ORTHO05D016102 2.9e-08 62.0 89 36.0
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 2.9e-08 62.0 86 36.0
BcaB05g22894 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-08 61.6 90 36.7
BcaB08g35769 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-08 61.6 68 45.6
BolC6t35313H Brassica oleracea HOM05D000003 ORTHO05D001498 5.0e-08 61.2 86 36.0
BolC8t51213H Brassica oleracea HOM05D000003 ORTHO05D016043 5.0e-08 61.2 92 33.7
Sp6g06080 Schrenkiella parvula HOM05D000003 ORTHO05D001498 5.0e-08 61.2 89 41.6
BcaC04g19261 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-08 60.8 95 37.9
Carub.0007s3605 Capsella rubella HOM05D000003 ORTHO05D001498 6.5e-08 60.8 93 37.6
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 8.5e-08 60.5 77 40.3
BcaC07g37018 Brassica carinata HOM05D000003 ORTHO05D016043 8.5e-08 60.5 93 32.3
BcaB06g25892 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-07 60.1 91 34.1
BcaC09g50587 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-07 60.1 86 34.9
BraA10t42905Z Brassica rapa HOM05D000003 ORTHO05D001498 1.9e-07 59.3 90 34.4
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 2.5e-07 58.9 79 38.0
BcaB05g22670 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-07 58.5 70 44.3
BcaB08g35581 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-07 58.5 93 36.6
BcaC06g36398 Brassica carinata HOM05D000003 ORTHO05D014927 3.2e-07 58.5 78 39.7
C07p04560 Brassica napus HOM05D000003 ORTHO05D014927 3.2e-07 58.5 78 39.7
C07p34510 Brassica napus HOM05D009133 ORTHO05D016102 3.2e-07 58.5 82 37.8
BolC7t43982H Brassica oleracea HOM05D009133 ORTHO05D016102 3.2e-07 58.5 82 37.8
BcaC01g04069 Brassica carinata HOM05D000003 ORTHO05D016043 4.2e-07 58.2 79 36.7
BcaC03g15807 Brassica carinata HOM05D000003 ORTHO05D001498 4.2e-07 58.2 92 38.0
BcaC03g15901 Brassica carinata HOM05D000003 ORTHO05D001498 5.5e-07 57.8 93 36.6
BcaC09g50877 Brassica carinata HOM05D000003 ORTHO05D001498 5.5e-07 57.8 72 43.1
AL7G44730 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 7.2e-07 57.4 79 38.0
BcaC04g23808 Brassica carinata HOM05D000003 ORTHO05D001498 7.2e-07 57.4 91 33.0
BcaC06g35222 Brassica carinata HOM05D000003 ORTHO05D001498 9.4e-07 57.0 92 34.8
C09p25590 Brassica napus HOM05D000003 ORTHO05D019990 9.4e-07 57.0 93 38.7
Sp7g04630 Schrenkiella parvula HOM05D000003 ORTHO05D001498 1.2e-06 56.6 90 34.4
BcaB01g02800 Brassica carinata HOM05D000003 ORTHO05D027722 1.6e-06 56.2 93 30.1
C06p09100 Brassica napus HOM05D009133 ORTHO05D016102 1.6e-06 56.2 82 36.6
BcaC01g05506 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-06 55.8 86 36.0
BcaC09g51035 Brassica carinata HOM05D000003 ORTHO05D000004 2.1e-06 55.8 90 37.8
BcaC09g49335 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-06 55.5 94 35.1
C04p37710 Brassica napus HOM05D000003 ORTHO05D014927 2.7e-06 55.5 71 36.6
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 3.6e-06 55.1 91 31.9
BcaC05g28118 Brassica carinata HOM05D000003 ORTHO05D000004 3.6e-06 55.1 90 38.9
Sp5g28990 Schrenkiella parvula HOM05D000003 ORTHO05D001498 3.6e-06 55.1 82 35.4
BcaC01g04304 Brassica carinata HOM05D000003 ORTHO05D032100 6.1e-06 54.3 95 32.6
BcaC06g35212 Brassica carinata HOM05D000003 ORTHO05D001498 6.1e-06 54.3 92 34.8
BraA06t24122Z Brassica rapa HOM05D000003 ORTHO05D016043 6.1e-06 54.3 77 33.8
BcaB02g10016 Brassica carinata HOM05D000003 ORTHO05D019978 8.0e-06 53.9 70 38.6
A03p66550 Brassica napus HOM05D000003 ORTHO05D016102 8.0e-06 53.9 85 35.3


User provided reference genes

Program Settings