Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 1.9e-164 582.4 282 100.0
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 2.4e-148 528.9 257 100.0
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 8.9e-66 254.6 172 77.3
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-65 254.2 144 88.2
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 2.9e-64 249.6 144 87.5
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 3.6e-59 232.6 124 92.7
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.2e-49 201.1 128 71.9
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.7e-46 189.9 259 43.6
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.0e-45 186.4 139 65.5
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 3.9e-45 186.0 134 67.2
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.1e-44 184.5 138 63.8
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 3.3e-44 183.0 142 64.8
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 3.6e-43 179.5 139 63.3
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 3.6e-43 179.5 139 63.3
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 3.1e-42 176.4 135 60.7
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 8.9e-42 174.9 139 61.9
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 2.6e-41 173.3 121 71.9
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 2.6e-41 173.3 130 65.4
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 1.2e-38 164.5 129 62.0
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-38 163.7 119 64.7
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 2.7e-38 163.3 129 62.0
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 4.6e-38 162.5 129 60.5
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 6.0e-38 162.2 128 60.9
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-37 161.4 129 61.2
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.3e-37 161.0 142 60.6
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 3.9e-37 159.5 173 47.4
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 7.3e-36 155.2 135 57.0
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 7.3e-36 155.2 135 57.0
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 7.3e-36 155.2 106 72.6
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.6e-35 154.1 135 54.8
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 1.6e-35 154.1 133 53.4
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.2e-33 147.9 135 57.8
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.4e-33 146.0 165 50.9
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.8e-33 145.6 127 54.3
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 5.8e-33 145.6 138 51.4
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 5.8e-33 145.6 133 52.6
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 1.1e-31 141.4 139 51.1
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.1e-31 141.4 128 54.7
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 1.6e-30 137.5 137 53.3
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 6.0e-30 135.6 107 57.0
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.0e-29 134.8 109 56.0
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.3e-29 134.4 127 51.2
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 1.7e-29 134.0 133 49.6
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 2.3e-29 133.7 127 48.8
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 2.3e-29 133.7 127 48.8
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.3e-29 133.7 108 57.4
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 3.9e-29 132.9 127 48.0
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 2.5e-28 130.2 118 49.2
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 2.5e-28 130.2 118 49.2
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 3.3e-28 129.8 113 49.6
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 3.3e-28 129.8 113 50.4
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.3e-28 129.8 112 57.1
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 5.6e-28 129.0 107 55.1
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 5.6e-28 129.0 107 55.1
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.8e-27 126.7 123 50.4
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 4.8e-27 125.9 103 55.3
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 4.8e-27 125.9 107 53.3
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 4.8e-27 125.9 155 44.5
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.4e-26 123.6 103 58.3
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 5.3e-26 122.5 113 50.4
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 1.5e-25 120.9 118 46.6
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-24 117.9 121 49.6
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-24 117.9 121 49.6
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 3.8e-24 116.3 112 51.8
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 3.8e-24 116.3 112 51.8
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.4e-23 113.6 89 60.7
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 5.5e-23 112.5 113 48.7
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 7.1e-23 112.1 113 51.3
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-22 111.3 132 44.7
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 1.2e-22 111.3 132 44.7
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-22 110.9 120 45.8
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 2.1e-22 110.5 71 73.2
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.0e-21 108.2 132 43.9
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 6.7e-21 105.5 105 50.5
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 2.5e-20 103.6 128 39.1
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 2.5e-20 103.6 138 43.5
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 2.5e-20 103.6 128 39.1
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 5.6e-20 102.4 120 38.3
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 7.4e-20 102.1 118 39.8
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 1.6e-19 100.9 141 35.5
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 1.6e-19 100.9 128 36.7
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 1.6e-19 100.9 120 39.2
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 2.1e-19 100.5 120 37.5
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 2.8e-19 100.1 113 41.6
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 2.8e-19 100.1 127 35.4
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 2.8e-19 100.1 120 37.5
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 2.8e-19 100.1 120 37.5
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 2.8e-19 100.1 127 35.4
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 3.7e-19 99.8 119 38.7
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 3.7e-19 99.8 120 37.5
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 3.7e-19 99.8 119 38.7
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 3.7e-19 99.8 158 39.2
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 3.7e-19 99.8 119 38.7
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 4.8e-19 99.4 117 48.7
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 6.2e-19 99.0 116 39.7
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 6.2e-19 99.0 129 38.0
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 8.1e-19 98.6 139 36.7
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 1.1e-18 98.2 110 40.9
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 1.4e-18 97.8 113 40.7
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 1.8e-18 97.4 111 36.9
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 2.4e-18 97.1 120 38.3
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.4e-18 97.1 106 40.6
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 3.1e-18 96.7 120 36.7
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 3.1e-18 96.7 151 40.4
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 3.1e-18 96.7 129 34.9
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 4.0e-18 96.3 126 38.1
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 4.0e-18 96.3 105 47.6
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 5.3e-18 95.9 112 42.0
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 5.3e-18 95.9 105 43.8
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 6.9e-18 95.5 145 35.2
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 9.0e-18 95.1 132 36.4
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 1.2e-17 94.7 141 35.5
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 1.2e-17 94.7 105 41.9
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 1.5e-17 94.4 120 35.8
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 1.5e-17 94.4 113 40.7
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 1.5e-17 94.4 121 38.8
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.5e-17 94.4 111 39.6
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.5e-17 94.4 106 38.7
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 2.0e-17 94.0 108 42.6
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 2.6e-17 93.6 106 39.6
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 2.6e-17 93.6 113 38.1
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 2.6e-17 93.6 113 38.1
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 2.6e-17 93.6 106 39.6
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 2.6e-17 93.6 113 38.1
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 3.4e-17 93.2 110 40.0
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-17 93.2 109 45.9
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 3.4e-17 93.2 109 45.9
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 4.5e-17 92.8 120 39.2
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 4.5e-17 92.8 106 48.1
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 7.6e-17 92.0 76 55.3
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 1.0e-16 91.7 134 41.0
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 1.0e-16 91.7 105 40.0
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 3.8e-16 89.7 115 38.3
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 4.2e-15 86.3 67 55.2
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 1.2e-14 84.7 115 35.7
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 2.7e-14 83.6 123 38.2
Carub.0007s2492 Capsella rubella HOM05D007337 ORTHO05D004972 3.5e-14 83.2 67 56.7
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 2.3e-13 80.5 118 34.7
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 8.7e-13 78.6 101 35.6
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 1.5e-12 77.8 103 35.9
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 1.9e-12 77.4 92 39.1
BcaC03g16910 Brassica carinata HOM05D008086 ORTHO05D004972 2.5e-12 77.0 92 39.1
CARHR215530 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.3e-12 76.6 55 61.8
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-11 74.3 109 36.7
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 1.6e-11 74.3 105 34.3
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 1.1e-10 71.6 87 35.6
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 2.4e-10 70.5 91 37.4
BcaNung00180 Brassica carinata HOM05D007337 ORTHO05D004972 3.1e-10 70.1 57 56.1
Actinidia02125 Actinidia chinensis HOM05D001099 ORTHO05D000958 9.0e-10 68.6 135 28.9
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 9.0e-10 68.6 124 30.6
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 4.5e-09 66.2 134 27.6
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 7.6e-09 65.5 84 45.2
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-08 64.3 65 50.8
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 2.2e-08 63.9 77 41.6
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 2.2e-08 63.9 77 41.6
BraA03t14092Z Brassica rapa HOM05D007337 ORTHO05D004972 6.5e-08 62.4 98 38.8
Sopen08g027190 Solanum pennellii HOM05D001099 ORTHO05D010560 6.5e-08 62.4 167 26.9
Rhsim09G0039000 Rhododendron simsii HOM05D007337 ORTHO05D000958 8.4e-08 62.0 106 30.2
Dinv39137 Davidia involucrata HOM05D001099 ORTHO05D010560 1.1e-07 61.6 99 35.4
PGSC0003DMG400004807 Solanum tuberosum HOM05D001099 ORTHO05D010560 1.4e-07 61.2 103 29.1
Solyc08g078710.3 Solanum lycopersicum HOM05D001099 ORTHO05D010560 1.6e-06 57.8 99 31.3
COL.COLO4_37190 Corchorus olitorius HOM05D007337 ORTHO05D010560 6.1e-06 55.8 105 28.6
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 7.9e-06 55.5 42 57.1


User provided reference genes

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