Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p47900 Brassica napus HOM05D010379 ORTHO05D012419 9.8e-65 250.0 126 100.0
BolC7t45312H Brassica oleracea HOM05D010379 ORTHO05D012419 9.8e-65 250.0 126 100.0
A03p49840 Brassica napus HOM05D010379 ORTHO05D012419 4.9e-64 247.7 126 98.4
BraA03t14079Z Brassica rapa HOM05D010379 ORTHO05D012419 4.9e-64 247.7 126 98.4
Carub.0007s2506 Capsella rubella HOM05D010379 ORTHO05D012419 1.2e-51 206.5 127 84.3
Sp7g15000 Schrenkiella parvula HOM05D010379 ORTHO05D012419 1.2e-51 206.5 124 84.7
AL7G38540 Arabidopsis lyrata HOM05D010379 ORTHO05D012419 1.8e-50 202.6 127 81.9
BcaNung00193 Brassica carinata HOM05D010379 ORTHO05D012419 4.0e-50 201.4 127 81.9
AT4G16447 Arabidopsis thaliana HOM05D010379 ORTHO05D012419 6.8e-50 200.7 127 81.1
A01p21100 Brassica napus HOM05D010379 ORTHO05D012419 1.5e-49 199.5 127 81.1
BraA01t02021Z Brassica rapa HOM05D010379 ORTHO05D012419 1.5e-49 199.5 127 81.1
C01p26370 Brassica napus HOM05D010379 ORTHO05D012419 1.7e-48 196.1 127 79.5
A08p12490 Brassica napus HOM05D010379 ORTHO05D012419 2.2e-48 195.7 128 78.9
BraA08t33240Z Brassica rapa HOM05D010379 ORTHO05D012419 2.2e-48 195.7 128 78.9
BcaC09g50349 Brassica carinata HOM05D010379 ORTHO05D012419 2.9e-48 195.3 127 79.5
BolC1t02584H Brassica oleracea HOM05D010379 ORTHO05D012419 2.9e-48 195.3 127 79.5
Thhalv10026565m.g Eutrema salsugineum HOM05D010379 ORTHO05D012419 3.7e-48 194.9 128 80.5
BolC8t48370H Brassica oleracea HOM05D010379 ORTHO05D012419 4.9e-48 194.5 128 78.9
CARHR222830 Cardamine hirsuta HOM05D010379 ORTHO05D012419 4.9e-48 194.5 128 81.2
BcaC07g37989 Brassica carinata HOM05D010379 ORTHO05D012419 7.3e-44 180.6 117 79.5
THA.LOC104815481 Tarenaya hassleriana HOM05D010379 ORTHO05D012419 2.4e-23 112.5 142 53.5
Aa31LG2G12520 Aethionema arabicum HOM05D010379 ORTHO05D012419 8.1e-19 97.4 140 47.1
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 6.6e-13 77.8 128 41.4
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 3.1e-10 68.9 133 41.4
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 9.0e-10 67.4 129 43.4
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.6e-09 65.9 133 37.6
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 7.6e-09 64.3 142 40.1
Duzib192G0740 Durio zibethinus HOM05D004793 ORTHO05D004423 1.9e-07 59.7 61 55.7
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 1.9e-07 59.7 142 39.4
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.4e-07 59.3 139 36.7
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 4.2e-07 58.5 139 38.1
Ciclev10017072m.g Citrus clementina HOM05D004793 ORTHO05D004423 5.5e-07 58.2 95 48.4
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 7.1e-07 57.8 135 37.8
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.2e-06 57.0 139 36.7
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 1.6e-06 56.6 135 41.5
DCAR_002230 Daucus carota HOM05D004793 ORTHO05D004423 4.6e-06 55.1 145 36.6
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 6.0e-06 54.7 141 36.9
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 7.9e-06 54.3 139 39.6


User provided reference genes

Program Settings