Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.7e-92 342.0 182 100.0
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 2.8e-89 332.0 182 97.8
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 4.5e-87 324.7 180 96.7
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 4.5e-87 324.7 180 96.7
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.0e-70 270.4 184 80.4
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 4.7e-68 261.5 183 79.8
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 7.7e-63 244.2 187 74.3
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.0e-62 243.8 186 73.7
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.1e-61 240.4 187 74.9
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.9e-61 239.6 178 75.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 9.2e-48 194.1 183 64.5
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 6.6e-46 188.0 180 61.1
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 4.3e-37 158.7 126 64.3
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 4.3e-37 158.7 149 59.7
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 1.6e-36 156.8 193 52.8
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 2.8e-36 156.0 190 51.1
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 3.6e-36 155.6 107 71.0
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 4.7e-36 155.2 176 54.0
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.1e-35 154.1 164 56.1
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 2.3e-35 152.9 108 71.3
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 2.3e-35 152.9 113 69.9
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 3.1e-35 152.5 114 68.4
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 4.0e-35 152.1 99 74.7
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 4.0e-35 152.1 155 54.8
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 5.2e-35 151.8 197 50.3
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 8.9e-35 151.0 149 57.7
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 8.9e-35 151.0 109 73.4
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 8.9e-35 151.0 123 63.4
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 8.9e-35 151.0 108 71.3
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.2e-34 150.6 123 63.4
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 2.0e-34 149.8 108 68.5
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.0e-34 149.8 149 56.4
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.6e-34 149.4 129 57.4
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 2.6e-34 149.4 128 60.2
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.6e-34 149.4 108 70.4
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.4e-34 149.1 148 56.8
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 3.4e-34 149.1 150 55.3
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 3.4e-34 149.1 119 64.7
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.4e-34 149.1 191 51.3
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 4.4e-34 148.7 115 68.7
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 4.4e-34 148.7 123 62.6
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 5.8e-34 148.3 184 50.5
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 5.8e-34 148.3 130 60.8
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 5.8e-34 148.3 174 50.0
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 7.6e-34 147.9 132 57.6
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.7e-33 146.7 117 64.1
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 2.2e-33 146.4 108 63.9
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 2.2e-33 146.4 108 67.6
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 3.8e-33 145.6 108 65.7
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 3.8e-33 145.6 160 51.9
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 4.9e-33 145.2 140 64.3
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 4.9e-33 145.2 111 64.9
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 6.4e-33 144.8 108 67.6
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 6.4e-33 144.8 108 67.6
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 6.4e-33 144.8 108 67.6
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 8.4e-33 144.4 112 67.9
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 8.4e-33 144.4 161 52.2
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 8.4e-33 144.4 161 52.2
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 8.4e-33 144.4 92 75.0
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.1e-32 144.1 105 67.6
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 1.9e-32 143.3 175 49.7
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.9e-32 143.3 108 65.7
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.9e-32 143.3 136 56.6
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.9e-32 143.3 108 63.9
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 3.2e-32 142.5 143 54.5
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 3.2e-32 142.5 112 65.2
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 3.2e-32 142.5 155 50.3
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 5.4e-32 141.7 155 52.3
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 7.1e-32 141.4 94 73.4
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 9.2e-32 141.0 108 63.9
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.6e-31 140.2 188 43.1
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.6e-31 140.2 96 69.8
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.1e-31 139.8 133 57.1
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.1e-31 139.8 186 46.2
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 2.7e-31 139.4 162 49.4
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 4.6e-31 138.7 176 50.0
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 4.6e-31 138.7 126 54.0
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 7.8e-31 137.9 184 48.9
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 7.8e-31 137.9 187 44.9
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.0e-30 137.5 110 65.5
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.0e-30 137.5 110 65.5
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.7e-30 136.7 109 61.5
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 3.0e-30 136.0 139 53.2
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.6e-30 134.8 107 64.5
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.5e-29 133.7 106 63.2
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 2.5e-29 132.9 185 44.3
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 5.6e-29 131.7 189 45.5
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 9.6e-29 131.0 88 78.4
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 2.1e-28 129.8 96 65.6
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 8.1e-28 127.9 89 75.3
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 4.0e-27 125.6 72 84.7
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 8.9e-27 124.4 118 57.6
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.2e-26 124.0 165 48.5
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.2e-26 124.0 106 57.5
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 2.0e-26 123.2 106 56.6
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 4.2e-24 115.5 98 55.1
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 7.1e-24 114.8 94 59.6
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 3.9e-22 109.0 82 56.1
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 5.1e-22 108.6 145 47.6
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 4.8e-20 102.1 98 45.9
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 2.6e-18 96.3 106 48.1
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 9.9e-18 94.4 178 41.0
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.3e-17 94.0 59 78.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-16 89.7 90 48.9
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 7.6e-10 68.2 38 76.3
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 9.9e-10 67.8 112 38.4
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.8e-06 57.0 44 63.6


User provided reference genes

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