Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p47770 Brassica napus HOM05D007337 ORTHO05D004972 5.5e-49 197.2 92 100.0
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 5.4e-20 100.9 92 57.6
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 1.0e-18 96.7 109 49.5
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 3.2e-17 91.7 109 49.5
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 3.2e-17 91.7 109 49.5
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 5.7e-14 80.9 47 74.5
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 6.6e-10 67.4 110 39.1
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.5e-09 65.5 49 57.1
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.3e-09 65.1 49 57.1
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.2e-08 63.2 47 57.4
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-08 62.4 46 60.9
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.1e-08 62.4 51 51.0
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.0e-07 60.1 48 50.0
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.0e-07 60.1 48 50.0
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 1.0e-07 60.1 45 60.0
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-07 60.1 45 60.0
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 1.0e-07 60.1 46 58.7
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.4e-07 59.7 45 60.0
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 1.8e-07 59.3 45 53.3
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.3e-07 58.9 46 52.2
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.3e-07 58.9 46 50.0
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 3.0e-07 58.5 46 54.3
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 3.0e-07 58.5 46 52.2
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 5.2e-07 57.8 45 57.8
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 6.8e-07 57.4 45 55.6
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 6.8e-07 57.4 46 54.3
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 8.9e-07 57.0 45 51.1
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 8.9e-07 57.0 45 55.6
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.2e-06 56.6 46 52.2
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-06 56.6 45 53.3
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-06 56.6 45 53.3
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-06 56.6 46 54.3
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 1.2e-06 56.6 46 54.3
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.0e-06 55.8 42 54.8
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 2.0e-06 55.8 45 51.1
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.0e-06 55.8 46 47.8
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.4e-06 55.1 52 46.2
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 3.4e-06 55.1 45 51.1
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-06 55.1 59 45.8
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-06 55.1 45 51.1
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 3.4e-06 55.1 45 51.1
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 3.4e-06 55.1 59 45.8
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 3.4e-06 55.1 46 50.0
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 3.4e-06 55.1 47 51.1
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 4.4e-06 54.7 45 53.3
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 4.4e-06 54.7 46 50.0
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 4.4e-06 54.7 45 51.1
CARHR222960 Cardamine hirsuta HOM05D007337 ORTHO05D116326 7.5e-06 53.9 59 45.8
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 9.8e-06 53.5 45 53.3


User provided reference genes

Program Settings