Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 5.4e-150 534.3 262 100.0
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 1.3e-116 423.3 217 96.8
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 6.9e-105 384.4 193 97.9
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 3.4e-104 382.1 190 99.5
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 4.2e-102 375.2 195 95.4
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.2e-101 373.6 195 94.9
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 8.7e-100 367.5 195 91.8
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 5.7e-99 364.8 195 90.8
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.3e-98 363.6 195 91.3
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 1.4e-97 360.1 195 89.7
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 2.4e-97 359.4 195 89.2
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 5.3e-97 358.2 195 89.2
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 5.3e-97 358.2 195 89.2
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 9.0e-97 357.5 195 89.2
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 9.0e-97 357.5 195 89.2
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 3.4e-96 355.5 195 88.7
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 1.7e-95 353.2 195 88.2
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 1.7e-95 353.2 195 88.2
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 1.7e-95 353.2 195 87.7
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 1.1e-89 334.0 192 84.4
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 1.1e-86 323.9 195 81.5
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 3.7e-82 308.9 193 78.8
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 2.4e-81 306.2 193 79.3
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 5.3e-81 305.1 215 68.8
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 9.1e-81 304.3 195 74.9
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 1.5e-80 303.5 215 68.4
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.7e-79 300.1 193 77.7
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.7e-79 300.1 195 73.8
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 1.7e-79 300.1 191 77.0
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 2.2e-79 299.7 193 75.6
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 2.2e-79 299.7 190 75.8
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 2.9e-79 299.3 193 75.6
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 5.0e-79 298.5 192 75.5
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 6.5e-79 298.1 193 76.2
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 8.5e-79 297.7 193 75.6
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.1e-78 297.4 195 76.4
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 1.9e-78 296.6 220 69.1
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 2.5e-78 296.2 195 74.9
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 2.5e-78 296.2 195 74.4
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 3.2e-78 295.8 193 74.6
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 3.2e-78 295.8 195 74.4
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 5.5e-78 295.0 193 74.6
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 5.5e-78 295.0 193 75.1
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 5.5e-78 295.0 222 66.7
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 5.5e-78 295.0 222 67.1
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.2e-77 293.9 195 74.4
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 1.2e-77 293.9 194 75.3
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 2.1e-77 293.1 193 74.1
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 2.1e-77 293.1 183 79.2
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 4.7e-77 292.0 193 73.6
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 4.7e-77 292.0 193 73.6
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 6.1e-77 291.6 195 73.3
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 8.0e-77 291.2 193 74.6
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 1.4e-76 290.4 209 71.3
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 1.8e-76 290.0 196 73.0
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 3.9e-76 288.9 193 74.6
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 3.9e-76 288.9 210 70.5
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 5.2e-76 288.5 193 74.1
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 5.2e-76 288.5 193 73.1
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 6.7e-76 288.1 195 73.3
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 8.8e-76 287.7 193 74.1
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 8.8e-76 287.7 223 67.7
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 1.1e-75 287.3 193 73.1
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 1.5e-75 287.0 193 75.1
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 1.5e-75 287.0 195 70.3
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 3.3e-75 285.8 193 73.1
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 5.7e-75 285.0 193 72.5
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 5.7e-75 285.0 193 73.6
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 7.4e-75 284.6 193 72.0
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 9.7e-75 284.3 195 71.3
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.3e-74 283.9 203 70.4
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 3.7e-74 282.3 193 72.5
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 4.8e-74 282.0 176 76.7
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 6.3e-74 281.6 193 71.0
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.4e-73 280.4 194 73.2
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 2.4e-73 279.6 174 74.7
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 2.4e-73 279.6 201 71.1
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.1e-73 279.3 193 72.0
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 4.1e-73 278.9 193 72.5
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 5.3e-73 278.5 194 71.6
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.3e-73 278.5 193 71.5
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 1.6e-72 276.9 193 69.4
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 2.0e-72 276.6 193 70.5
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 2.6e-72 276.2 183 77.0
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 2.6e-72 276.2 200 69.0
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 4.5e-72 275.4 193 72.0
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 5.9e-72 275.0 190 70.0
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.0e-71 274.2 193 73.1
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.0e-71 274.2 193 73.1
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 3.6e-69 265.8 205 64.4
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.2e-67 260.8 198 65.7
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 2.0e-67 260.0 196 68.4
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 5.7e-67 258.5 219 62.1
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 2.7e-64 249.6 205 62.0
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.0e-63 247.7 209 63.2
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 1.3e-63 247.3 200 62.5
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 3.8e-63 245.7 157 75.8
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 2.5e-62 243.0 180 68.9
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 7.2e-62 241.5 195 65.1
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 9.4e-62 241.1 177 65.5
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.6e-61 240.4 212 61.3
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 2.1e-61 240.0 153 75.8
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 4.7e-61 238.8 214 56.5
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 6.8e-60 235.0 146 76.0
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 4.4e-59 232.3 193 63.2
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.0e-55 221.1 203 56.7
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 2.5e-54 216.5 149 71.8
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 6.8e-52 208.4 148 70.9
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 7.8e-48 194.9 239 48.5
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 1.4e-44 184.1 154 55.2
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 2.1e-37 160.2 168 44.6
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 6.2e-29 132.1 189 42.9
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.2e-28 129.0 77 79.2
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.2e-27 127.9 96 63.5
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 7.8e-24 115.2 89 60.7
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 3.0e-23 113.2 65 80.0
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 3.3e-22 109.8 86 64.0
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 1.4e-20 104.4 77 61.0
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 5.6e-14 82.4 68 61.8
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 1.7e-10 70.9 146 34.9
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 5.4e-09 65.9 58 58.6
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 6.6e-07 58.9 41 61.0


User provided reference genes

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