Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 4.1e-215 751.1 380 100.0
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 9.4e-212 740.0 380 98.9
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 1.5e-209 732.6 380 98.2
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 1.8e-207 725.7 385 96.6
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 3.1e-207 724.9 389 95.9
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 1.6e-195 686.0 380 91.3
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 1.6e-195 686.0 380 91.3
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 8.3e-192 673.7 380 89.5
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 1.8e-191 672.5 369 91.3
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.7e-174 615.5 387 82.2
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 2.4e-151 539.3 369 77.8
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 3.1e-146 522.3 372 72.3
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 1.7e-144 516.5 370 72.7
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.2e-144 516.2 372 71.0
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.2e-144 516.2 372 71.0
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 2.1e-139 499.6 275 92.0
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 2.1e-139 499.6 275 92.0
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.7e-128 463.4 370 63.5
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 1.7e-99 367.1 204 90.2
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 1.7e-99 367.1 204 90.2
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.1e-92 344.4 388 52.6
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 2.7e-86 323.2 355 52.7
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 3.6e-86 322.8 179 93.3
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 8.8e-77 291.6 387 45.5
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 8.8e-77 291.6 392 45.4
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 8.8e-77 291.6 392 45.4
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 7.5e-76 288.5 391 46.0
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 7.5e-76 288.5 391 46.0
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 7.5e-76 288.5 391 46.0
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 3.8e-72 276.2 384 45.1
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.2e-60 238.0 353 38.5
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 3.5e-41 173.3 195 49.2
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 4.6e-41 172.9 195 48.7
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 5.1e-40 169.5 195 47.7
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 8.6e-40 168.7 193 48.2
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.5e-39 167.9 195 48.2
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.6e-39 166.0 207 43.5
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 5.6e-39 166.0 207 43.5
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 9.5e-39 165.2 198 44.4
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 9.5e-39 165.2 198 44.4
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.1e-38 164.1 205 47.3
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 2.8e-38 163.7 186 47.3
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 6.2e-38 162.5 187 50.3
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 6.2e-38 162.5 173 48.0
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 3.1e-37 160.2 195 47.7
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.2e-36 158.3 209 43.1
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 2.0e-36 157.5 186 46.8
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 3.4e-36 156.8 189 47.6
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 3.4e-36 156.8 186 47.3
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 5.8e-36 156.0 187 48.1
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 7.6e-36 155.6 196 45.4
A03p47330 Brassica napus HOM05D007461 ORTHO05D010345 2.9e-35 153.7 80 96.2
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 4.9e-35 152.9 196 44.9
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 8.4e-35 152.1 187 47.6
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 4.2e-34 149.8 191 44.0
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 2.1e-33 147.5 174 44.3
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 2.7e-33 147.1 195 44.6
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.3e-31 140.2 188 44.7
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 4.8e-30 136.3 180 43.9
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-29 135.2 199 42.2
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 1.8e-29 134.4 183 41.5
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 1.8e-29 134.4 187 42.8
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 3.1e-29 133.7 180 43.9
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 5.3e-29 132.9 363 29.8
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 5.3e-29 132.9 180 43.9
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 5.3e-29 132.9 198 40.4
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 5.3e-29 132.9 195 40.0
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 9.0e-29 132.1 179 42.5
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 2.0e-28 131.0 190 40.0
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 2.0e-28 131.0 190 40.0
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 5.8e-28 129.4 190 39.5
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 7.6e-28 129.0 190 42.1
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 7.6e-28 129.0 190 42.1
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 2.2e-27 127.5 190 38.9
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 2.9e-27 127.1 190 41.1
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 4.9e-27 126.3 188 40.4
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.9e-26 124.4 190 37.4
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 2.4e-26 124.0 199 38.2
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 2.4e-26 124.0 199 38.2
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 9.3e-26 122.1 195 41.0
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 1.2e-25 121.7 190 37.4
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 2.1e-25 120.9 190 37.9
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 2.1e-25 120.9 190 37.9
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 2.7e-25 120.6 201 37.3
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 4.6e-25 119.8 199 37.2
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 4.6e-25 119.8 195 40.5
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 4.6e-25 119.8 199 37.2
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 4.6e-25 119.8 199 37.2
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 7.8e-25 119.0 190 37.4
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 1.7e-24 117.9 187 40.6
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 1.7e-24 117.9 187 40.6
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 6.6e-24 115.9 190 37.4
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-23 115.2 190 37.4
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.6e-22 111.3 199 39.7
Aa31LG2G4430 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.4e-21 108.2 187 35.3
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 2.4e-21 107.5 116 44.8
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.7e-17 94.0 117 42.7
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 5.6e-15 86.3 170 34.1
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 2.8e-14 84.0 118 39.0
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 1.1e-13 82.0 118 39.0
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 2.4e-13 80.9 138 37.7
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 7.6e-12 75.9 167 30.5
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 7.6e-12 75.9 167 30.5
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.0e-11 75.5 190 28.9
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.8e-11 73.6 170 31.8
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 3.8e-11 73.6 146 35.6
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 6.5e-11 72.8 196 29.6
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 5.5e-10 69.7 153 33.3
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 2.1e-09 67.8 160 30.6
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 1.8e-08 64.7 182 30.2
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 2.3e-08 64.3 194 30.4
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 1.9e-07 61.2 159 32.1
BcaB06g27386 Brassica carinata HOM05D008352 ORTHO05D014403 2.5e-07 60.8 148 31.8
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 2.5e-07 60.8 184 29.9
BcaC06g33640 Brassica carinata HOM05D007461 ORTHO05D093415 4.3e-07 60.1 69 46.4
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 4.3e-07 60.1 160 30.6
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 5.7e-07 59.7 155 30.3
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 1.6e-06 58.2 383 21.7
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 1.6e-06 58.2 146 30.1
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 1.6e-06 58.2 146 30.1
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 2.1e-06 57.8 159 29.6
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 2.1e-06 57.8 175 28.6
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 2.8e-06 57.4 163 32.5
THA.LOC104823935 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 8.2e-06 55.8 183 27.3


User provided reference genes

Program Settings