Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p45210 Brassica napus HOM05D003935 ORTHO05D005096 1.3e-179 632.9 311 100.0
BolC7t45044H Brassica oleracea HOM05D003935 ORTHO05D005096 8.6e-179 630.2 311 99.7
BcaC06g33155 Brassica carinata HOM05D003935 ORTHO05D005096 6.2e-169 597.4 315 94.3
Thhalv10004633m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 7.0e-165 583.9 315 92.1
AL8G38190 Arabidopsis lyrata HOM05D003935 ORTHO05D005096 1.6e-164 582.8 315 91.7
Carub.0008s2219 Capsella rubella HOM05D003935 ORTHO05D005096 2.1e-164 582.4 315 91.4
CARHR275270 Cardamine hirsuta HOM05D003935 ORTHO05D005096 7.8e-164 580.5 315 91.1
Sp2g24700 Schrenkiella parvula HOM05D003935 ORTHO05D005096 5.1e-163 577.8 313 91.7
AT5G61500 Arabidopsis thaliana HOM05D003935 ORTHO05D005096 4.3e-162 574.7 315 90.5
THA.LOC104819415 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 3.1e-160 568.5 314 88.5
Aa31LG11G1910 Aethionema arabicum HOM05D003935 ORTHO05D005096 1.9e-157 559.3 310 89.0
A03p47100 Brassica napus HOM05D003935 ORTHO05D005096 2.7e-156 555.4 311 90.0
THA.LOC104801570 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 1.0e-155 553.5 313 87.2
BraA03t13837Z Brassica rapa HOM05D003935 ORTHO05D005096 1.3e-155 553.1 311 89.7
Sp6g35250 Schrenkiella parvula HOM05D003935 ORTHO05D005096 1.3e-155 553.1 315 86.3
Thhalv10014155m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 8.6e-155 550.4 315 86.0
Glyma.09G231000 Glycine max HOM05D003935 ORTHO05D005096 7.3e-154 547.4 314 85.4
TWI14G1423 Tripterygium wilfordii HOM05D003935 ORTHO05D005096 8.1e-153 543.9 316 84.8
Manes.06G132800 Manihot esculenta HOM05D003935 ORTHO05D005096 2.4e-152 542.3 316 83.9
Lalb_Chr01g0000281 Lupinus albus HOM05D003935 ORTHO05D005096 5.2e-152 541.2 312 83.7
Migut.F00500 Erythranthe guttata HOM05D003935 ORTHO05D005096 8.9e-152 540.4 316 83.2
Glyma.12G005700 Glycine max HOM05D003935 ORTHO05D005096 1.5e-151 539.7 316 85.8
COL.COLO4_12445 Corchorus olitorius HOM05D003935 ORTHO05D005096 2.6e-151 538.9 315 83.2
SGA_v2.0_scaffold44G16558 Striga asiatica HOM05D003935 ORTHO05D005096 2.6e-151 538.9 314 83.8
BcaB05g21604 Brassica carinata HOM05D003935 ORTHO05D005096 3.4e-151 538.5 315 84.4
Duzib133G0969 Durio zibethinus HOM05D003935 ORTHO05D005096 3.4e-151 538.5 315 82.5
VMungo1127G0071 Vigna mungo HOM05D003935 ORTHO05D005096 3.4e-151 538.5 312 83.3
SalBow1G3743 Salvia bowleyana HOM05D003935 ORTHO05D005096 7.6e-151 537.3 316 82.9
GSVIVG01018224001 Vitis vinifera HOM05D003935 ORTHO05D005096 7.6e-151 537.3 316 83.9
Oeu031400.2 Olea europaea HOM05D003935 ORTHO05D005096 9.9e-151 537.0 317 82.0
Potri.001G126500 Populus trichocarpa HOM05D003935 ORTHO05D005096 9.9e-151 537.0 317 83.6
Medtr4g036265 Medicago truncatula HOM05D003935 ORTHO05D005096 1.3e-150 536.6 312 83.0
Thecc.01G388100 Theobroma cacao HOM05D003935 ORTHO05D005096 1.3e-150 536.6 315 82.9
Psat7g207040 Pisum sativum HOM05D003935 ORTHO05D005096 1.7e-150 536.2 312 83.0
CSS0046772 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 2.2e-150 535.8 316 83.9
PGR142G1672 Punica granatum HOM05D003935 ORTHO05D005096 2.2e-150 535.8 314 83.4
MSTRG.27208 Avicennia marina HOM05D003935 ORTHO05D005096 2.9e-150 535.4 313 84.0
Eucgr.K00175 Eucalyptus grandis HOM05D003935 ORTHO05D005096 3.8e-150 535.0 314 83.1
Lalb_Chr19g0126281 Lupinus albus HOM05D003935 ORTHO05D005096 3.8e-150 535.0 314 82.8
Sopen06g010820 Solanum pennellii HOM05D003935 ORTHO05D005096 6.4e-150 534.3 316 83.5
Duzib138G0818 Durio zibethinus HOM05D003935 ORTHO05D005096 8.4e-150 533.9 315 82.9
Hma1.2p1_1132F.1_g260170 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 8.4e-150 533.9 313 82.1
Solyc06g034160.3 Solanum lycopersicum HOM05D003935 ORTHO05D005096 1.4e-149 533.1 316 83.2
TPR.G3680 Trifolium pratense HOM05D003935 ORTHO05D005096 1.9e-149 532.7 312 82.7
CSS0045715 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 2.4e-149 532.3 316 82.9
Dinv16851 Davidia involucrata HOM05D003935 ORTHO05D005096 3.2e-149 531.9 316 82.9
Gohir.D08G159150 Gossypium hirsutum HOM05D003935 ORTHO05D005096 3.2e-149 531.9 315 82.9
Gorai.004G165200 Gossypium raimondii HOM05D003935 ORTHO05D005096 3.2e-149 531.9 315 82.9
Gohir.A08G137866 Gossypium hirsutum HOM05D003935 ORTHO05D005096 4.2e-149 531.6 315 82.5
Peaxi162Scf00304g01342 Petunia axillaris HOM05D003935 ORTHO05D005096 4.2e-149 531.6 316 82.3
Potri.003G107000 Populus trichocarpa HOM05D003935 ORTHO05D005096 4.2e-149 531.6 318 83.0
CANSAT21G2109 Cannabis sativa HOM05D003935 ORTHO05D005096 5.4e-149 531.2 316 81.6
Nn6g33882 Nelumbo nucifera HOM05D003935 ORTHO05D005096 7.1e-149 530.8 316 82.0
Nitab4.5_0000448g0060 Nicotiana tabacum HOM05D003935 ORTHO05D005096 7.1e-149 530.8 316 83.5
BolC2t06285H Brassica oleracea HOM05D003935 ORTHO05D005096 9.2e-149 530.4 315 83.8
CAN.G330.5 Capsicum annuum HOM05D003935 ORTHO05D005096 9.2e-149 530.4 316 82.9
Cpa.g.sc16.168 Carica papaya HOM05D003935 ORTHO05D005096 9.2e-149 530.4 315 82.2
Phvul.011G006500 Phaseolus vulgaris HOM05D003935 ORTHO05D005096 9.2e-149 530.4 312 82.4
vmacro09915 Vaccinium macrocarpon HOM05D003935 ORTHO05D005096 9.2e-149 530.4 316 83.2
Atru.chr1.845 Acer truncatum HOM05D003935 ORTHO05D005096 1.2e-148 530.0 313 82.1
Cfa012922 Carpinus fangiana HOM05D003935 ORTHO05D005096 2.7e-148 528.9 316 82.6
TAR374G1483 Trochodendron aralioides HOM05D003935 ORTHO05D005096 2.7e-148 528.9 316 81.3
Hma1.2p1_0432F.1_g151940 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 6.0e-148 527.7 314 82.2
Actinidia01047 Actinidia chinensis HOM05D003935 ORTHO05D005096 7.8e-148 527.3 314 83.1
QL04p034713 Quercus lobata HOM05D003935 ORTHO05D005096 1.3e-147 526.6 314 82.5
PGSC0003DMG400021594 Solanum tuberosum HOM05D003935 ORTHO05D005096 1.7e-147 526.2 316 82.3
arahy.Tifrunner.gnm1.ann1.YZL4IN Arachis hypogaea HOM05D003935 ORTHO05D005096 2.3e-147 525.8 310 82.6
Gohir.D07G154200 Gossypium hirsutum HOM05D003935 ORTHO05D005096 3.0e-147 525.4 315 81.0
Gorai.001G176400 Gossypium raimondii HOM05D003935 ORTHO05D005096 3.0e-147 525.4 315 81.0
HanXRQChr15g0485951 Helianthus annuus HOM05D003935 ORTHO05D005096 3.0e-147 525.4 316 80.4
RcHm_v2.0_Chr1g0346321 Rosa chinensis HOM05D003935 ORTHO05D005096 3.0e-147 525.4 311 82.0
Sabra01G0097600 Salix brachista HOM05D003935 ORTHO05D005096 6.6e-147 524.2 315 81.9
AUR62002246 Chenopodium quinoa HOM05D003935 ORTHO05D005096 3.3e-146 521.9 314 81.5
ClCG06G002480 Citrullus lanatus HOM05D003935 ORTHO05D005096 3.3e-146 521.9 315 80.6
CsaV3_6G008640 Cucumis sativus L. HOM05D003935 ORTHO05D005096 3.3e-146 521.9 315 81.0
MSTRG.8834 Avicennia marina HOM05D003935 ORTHO05D005096 4.3e-146 521.5 314 80.6
MELO3C022280.2 Cucumis melo HOM05D003935 ORTHO05D005096 4.3e-146 521.5 315 80.3
Gohir.A07G148000 Gossypium hirsutum HOM05D003935 ORTHO05D005096 4.3e-146 521.5 315 80.3
MD02G1218100 Malus domestica HOM05D003935 ORTHO05D005096 4.3e-146 521.5 311 81.4
FvH4_7g09530 Fragaria vesca HOM05D003935 ORTHO05D005096 7.3e-146 520.8 314 81.5
FAN06G5089 Fragaria x ananassa HOM05D003935 ORTHO05D005096 7.3e-146 520.8 314 81.5
FAN01G1603 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.2e-145 520.0 314 81.2
FAN03G1633 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.2e-145 520.0 314 81.5
FAN06G4162 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.2e-145 520.0 314 81.5
Lj3g0013928 Lotus japonicus HOM05D003935 ORTHO05D005096 1.6e-145 519.6 316 80.7
Nitab4.5_0000262g0090 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.6e-145 519.6 316 82.9
FAN10G2569 Fragaria x ananassa HOM05D003935 ORTHO05D005096 2.1e-145 519.2 314 81.2
FAN10G4028 Fragaria x ananassa HOM05D003935 ORTHO05D005096 2.1e-145 519.2 314 81.2
Prupe.2G123000 Prunus persica HOM05D003935 ORTHO05D005096 2.1e-145 519.2 311 80.1
Aqoxy7G00829 Aquilegia oxysepala HOM05D003935 ORTHO05D005096 2.8e-145 518.8 314 79.6
CiPaw.14G023500 Carya illinoinensis HOM05D003935 ORTHO05D005096 3.6e-145 518.5 313 80.5
Rhsim09G0190400 Rhododendron simsii HOM05D003935 ORTHO05D005096 3.6e-145 518.5 331 79.2
DCAR_020181 Daucus carota HOM05D003935 ORTHO05D005096 4.7e-145 518.1 315 79.4
Lj1C977G12 Lonicera japonica HOM05D003935 ORTHO05D005096 1.1e-144 516.9 339 76.4
PSO782G0781 Papaver somniferum HOM05D003935 ORTHO05D005096 1.1e-144 516.9 315 81.6
Sed0016106 Sechium edule HOM05D003935 ORTHO05D005096 1.4e-144 516.5 315 80.3
Lsat_1_v5_gn_5_9340 Lactuca sativa HOM05D003935 ORTHO05D005096 4.0e-144 515.0 316 78.5
PSO063G2499 Papaver somniferum HOM05D003935 ORTHO05D005096 4.0e-144 515.0 315 81.3
unitig_37.g12492 Utricularia gibba HOM05D003935 ORTHO05D005096 6.9e-144 514.2 313 81.8
BcaC03g13194 Brassica carinata HOM05D003935 ORTHO05D005096 9.0e-144 513.8 315 82.5
Haze_21276 Corylus avellana HOM05D003935 ORTHO05D005096 1.3e-142 510.0 322 79.2
BcaC06g33158 Brassica carinata HOM05D003935 ORTHO05D005096 1.7e-142 509.6 258 98.4
BraA02t04926Z Brassica rapa HOM05D003935 ORTHO05D005096 4.9e-142 508.1 315 81.9
arahy.Tifrunner.gnm1.ann1.2B4GQV Arachis hypogaea HOM05D003935 ORTHO05D005096 8.4e-142 507.3 306 80.7
Sabra03G0073800 Salix brachista HOM05D003935 ORTHO05D005096 8.4e-142 507.3 384 69.3
HanXRQChr16g0512861 Helianthus annuus HOM05D003935 ORTHO05D005096 1.9e-141 506.1 316 77.8
QL02p025668 Quercus lobata HOM05D003935 ORTHO05D005096 2.4e-141 505.8 314 79.6
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 4.2e-141 505.0 311 81.7
arahy.Tifrunner.gnm1.ann1.16SP4W Arachis hypogaea HOM05D003935 ORTHO05D005096 1.2e-140 503.4 310 79.7
Actinidia13591 Actinidia chinensis HOM05D003935 ORTHO05D005096 3.0e-139 498.8 310 79.7
Cc02_g04470 Coffea canephora HOM05D003935 ORTHO05D005096 8.7e-139 497.3 317 76.3
CDE04G2838 Ceratophyllum demersum HOM05D003935 ORTHO05D005096 2.5e-138 495.7 308 79.5
Ciclev10005442m.g Citrus clementina HOM05D003935 ORTHO05D005096 3.3e-138 495.4 316 77.8
Aa31LG3G18800 Aethionema arabicum HOM05D003935 ORTHO05D005096 1.3e-137 493.4 313 80.8
Rhsim03G0165100 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.3e-137 493.4 336 74.4
arahy.Tifrunner.gnm1.ann1.9TCX0P Arachis hypogaea HOM05D003935 ORTHO05D005096 1.1e-136 490.3 306 79.1
Hund04562 Selenicereus undatus HOM05D003935 ORTHO05D005096 3.8e-134 481.9 311 76.2
Mapoly0003s0208 Marchantia polymorpha HOM05D003935 ORTHO05D005096 8.4e-134 480.7 315 73.3
ECA232G4201 Erigeron canadensis HOM05D003935 ORTHO05D005096 4.2e-133 478.4 296 77.7
EL10Ac3g05885 Beta vulgaris HOM05D003935 ORTHO05D005096 1.8e-131 473.0 286 80.1
Ca_12623_v3 Cicer arietinum L. HOM05D003935 ORTHO05D005096 1.8e-131 473.0 312 76.6
Ah.07g207480 Amaranthus hybridus HOM05D003935 ORTHO05D005096 4.3e-130 468.4 289 78.5
Pp3c8_11900 Physcomitrium patens HOM05D003935 ORTHO05D005096 5.3e-128 461.5 309 71.8
Haze_02753 Corylus avellana HOM05D003935 ORTHO05D005096 9.0e-128 460.7 463 54.6
Sc10g0008570 Simmondsia chinensis HOM05D003935 ORTHO05D005096 8.4e-126 454.1 280 80.0
CiPaw.07G237000 Carya illinoinensis HOM05D003935 ORTHO05D005096 1.9e-125 453.0 327 71.3
Os01g0200000 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 1.6e-124 449.9 311 72.0
Nitab4.5_0001267g0110 Nicotiana tabacum HOM05D003935 ORTHO05D005096 7.9e-124 447.6 283 78.1
Lsat_1_v5_gn_9_51820 Lactuca sativa HOM05D003935 ORTHO05D005096 2.3e-123 446.0 313 71.6
SMO134G0003 Selaginella moellendorffii HOM05D003935 ORTHO05D005096 2.1e-121 439.5 313 70.6
Zm00001eb391210 Zea mays HOM05D003935 ORTHO05D005096 2.1e-116 422.9 308 69.5
ATR0057G070 Amborella trichopoda HOM05D003935 ORTHO05D005096 4.1e-112 408.7 283 70.7
Actinidia24986 Actinidia chinensis HOM05D003935 ORTHO05D005096 2.1e-108 396.4 242 80.6
AUR62015457 Chenopodium quinoa HOM05D003935 ORTHO05D005096 1.1e-90 337.4 215 77.2
MD07G1099100 Malus domestica HOM05D003935 ORTHO05D005096 9.7e-82 307.8 189 77.2
CBR_g28076 Chara braunii HOM05D003935 ORTHO05D000002 3.1e-80 302.8 252 61.1
Cre02.g102350 Chlamydomonas reinhardtii HOM05D003935 ORTHO05D005096 9.8e-74 281.2 307 50.5
MCO14G260 Micromonas commoda HOM05D003935 ORTHO05D005096 1.1e-72 277.7 312 50.0
arahy.Tifrunner.gnm1.ann1.VY970J Arachis hypogaea HOM05D003935 ORTHO05D005096 5.4e-72 275.4 159 84.3
Nitab4.5_0001358g0020 Nicotiana tabacum HOM05D003935 ORTHO05D005096 2.5e-69 266.5 173 73.4
Dinv06578 Davidia involucrata HOM05D003935 ORTHO05D005096 5.5e-69 265.4 177 72.9
AagrBONN_evm.TU.Sc2ySwM_369.216 Anthoceros agrestis HOM05D003935 ORTHO05D005096 5.2e-67 258.8 273 51.6
SEGI_20183 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 1.7e-62 243.8 190 62.6
arahy.Tifrunner.gnm1.ann1.XHAQ77 Arachis hypogaea HOM05D003935 ORTHO05D005096 4.3e-61 239.2 182 69.2
PRCOL_00004022 Prasinoderma coloniale HOM05D003935 ORTHO05D005096 3.6e-60 236.1 297 44.8
Nn051s41922 Nelumbo nucifera HOM05D003935 ORTHO05D005096 2.3e-59 233.4 153 72.5
Nn1g09078 Nelumbo nucifera HOM05D003935 ORTHO05D005096 2.3e-59 233.4 153 72.5
CsaV3_4G004080 Cucumis sativus L. HOM05D003935 ORTHO05D044846 6.8e-59 231.9 285 47.4
Haze_27326 Corylus avellana HOM05D003935 ORTHO05D005096 4.1e-56 222.6 305 41.0
Nitab4.5_0001358g0040 Nicotiana tabacum HOM05D003935 ORTHO05D001473 2.0e-55 220.3 106 97.2
Os10g0560450 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 1.6e-52 210.7 181 59.7
AL7G47000 Arabidopsis lyrata HOM05D003935 ORTHO05D003430 7.5e-50 201.8 171 66.7
MELO3C032833.2 Cucumis melo HOM05D003935 ORTHO05D044846 1.7e-46 190.7 298 42.3
BcaB05g21605 Brassica carinata HOM05D003935 ORTHO05D005096 5.1e-46 189.1 149 65.8
Zm00001eb216570 Zea mays HOM05D003935 ORTHO05D005096 1.5e-45 187.6 126 70.6
SEGI_13739 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 2.1e-44 183.7 103 83.5
Zm00001eb363440 Zea mays HOM05D003935 ORTHO05D005096 1.4e-43 181.0 109 78.0
Zm00001eb003720 Zea mays HOM05D003935 ORTHO05D005096 5.2e-43 179.1 109 77.1
Zm00001eb078430 Zea mays HOM05D003935 ORTHO05D005096 5.2e-43 179.1 109 77.1
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 6.6e-38 162.2 147 59.9
Rhsim06G0236800 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.6e-36 157.5 140 59.3
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 2.8e-36 156.8 274 33.9
BcaC04g19029 Brassica carinata HOM05D003935 ORTHO05D005096 1.7e-33 147.5 114 74.6
Rhsim11G0131000 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.4e-32 143.7 181 48.1
BcaB01g00746 Brassica carinata HOM05D003935 ORTHO05D005096 8.7e-30 135.2 107 63.6
SEGI_32586 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 2.9e-25 120.2 63 82.5
Rhsim06G0096100 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.2e-23 114.8 118 55.9
A09p20840 Brassica napus HOM05D000772 ORTHO05D003239 3.5e-23 113.2 79 69.6
BraA09t37687Z Brassica rapa HOM05D000772 ORTHO05D003239 3.5e-23 113.2 79 69.6
MD07G1099000 Malus domestica HOM05D003935 ORTHO05D005096 1.5e-21 107.8 55 87.3
CBR_g28077 Chara braunii HOM05D003935 ORTHO05D005096 4.8e-20 102.8 72 63.9
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 4.5e-18 96.3 194 35.6
arahy.Tifrunner.gnm1.ann1.W2J7UU Arachis hypogaea HOM05D003935 ORTHO05D023770 1.9e-16 90.9 52 78.8
C03p26610 Brassica napus HOM05D003935 ORTHO05D023770 5.5e-16 89.4 52 78.8
SalBow2G0135 Salvia bowleyana HOM05D003935 ORTHO05D357983 5.5e-16 89.4 47 85.1
Zm00001eb269920 Zea mays HOM05D001580 ORTHO05D001517 2.1e-15 87.4 52 80.8
BcaC03g17887 Brassica carinata HOM05D003935 ORTHO05D005096 7.9e-15 85.5 43 93.0
Actinidia10778 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.1e-13 81.6 91 57.1
Rhsim12G0075300 Rhododendron simsii HOM05D016728 ORTHO05D338590 1.3e-09 68.2 103 45.6
BcaC09g49081 Brassica carinata HOM05D003935 ORTHO05D091498 2.1e-07 60.8 54 64.8
Zm00001eb395010 Zea mays HOM05D034860 ORTHO05D442630 1.3e-06 58.2 36 63.9
BcaC02g10492 Brassica carinata HOM05D036142 ORTHO05D023770 3.9e-06 56.6 28 92.9
C04p28240 Brassica napus HOM05D036142 ORTHO05D023770 3.9e-06 56.6 28 92.9
BolC4t24369H Brassica oleracea HOM05D036142 ORTHO05D023770 3.9e-06 56.6 28 92.9


User provided reference genes

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