Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.9e-173 612.5 316 100.0
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.9e-173 612.5 316 100.0
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.6e-172 609.4 316 99.4
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.6e-172 609.4 316 99.4
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.3e-171 606.3 316 98.4
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 9.0e-168 593.6 316 96.5
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 3.3e-162 575.1 317 93.4
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 6.7e-155 550.8 316 88.6
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 5.3e-152 541.2 316 87.7
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 5.0e-150 534.6 316 85.8
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 8.5e-150 533.9 315 87.3
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.8e-142 508.4 316 83.2
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 2.6e-138 495.7 316 81.0
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.1e-125 453.8 316 74.7
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 6.6e-102 374.8 314 64.0
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 3.3e-101 372.5 314 63.1
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.6e-100 370.2 316 61.4
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.1e-100 369.8 315 61.9
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-99 367.5 314 62.1
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.5e-98 363.6 316 60.4
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.5e-98 363.6 316 61.4
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 7.6e-98 361.3 316 60.4
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 9.9e-98 360.9 316 61.1
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 1.7e-97 360.1 316 60.8
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 4.9e-97 358.6 318 61.0
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.4e-96 356.3 316 61.4
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.1e-96 354.8 319 58.9
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 9.2e-96 354.4 319 58.9
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 1.6e-95 353.6 316 59.8
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 3.5e-95 352.4 319 58.6
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.5e-95 352.4 319 58.6
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.0e-94 350.9 317 59.6
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 2.3e-94 349.7 316 58.5
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.0e-94 349.4 315 58.7
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 3.9e-94 349.0 315 59.7
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.1e-93 347.4 316 59.5
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 3.3e-93 345.9 314 58.3
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.6e-93 345.1 352 54.8
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 7.3e-93 344.7 327 56.3
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 9.6e-93 344.4 315 58.4
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 1.6e-92 343.6 315 57.8
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 1.6e-92 343.6 315 57.8
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 2.8e-92 342.8 317 59.3
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 8.1e-92 341.3 316 58.2
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.1e-91 340.9 316 58.2
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.4e-91 340.5 314 58.3
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 3.1e-91 339.3 316 58.5
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 3.1e-91 339.3 316 57.6
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 3.1e-91 339.3 315 56.5
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 4.0e-91 339.0 316 56.0
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 1.2e-90 337.4 254 66.5
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.2e-90 337.4 316 57.6
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 2.0e-90 336.7 316 57.0
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 2.0e-90 336.7 323 57.6
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 2.0e-90 336.7 327 56.0
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 2.6e-90 336.3 316 57.6
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 3.4e-90 335.9 316 57.9
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 4.4e-90 335.5 317 55.5
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 2.2e-89 333.2 317 54.9
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 2.2e-89 333.2 316 56.0
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 3.8e-89 332.4 315 53.3
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 6.4e-89 331.6 313 57.2
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 1.9e-88 330.1 318 56.6
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 4.2e-88 328.9 318 56.3
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 9.3e-88 327.8 315 54.6
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.1e-87 326.6 312 55.4
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 6.0e-87 325.1 315 54.9
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.0e-86 324.3 317 57.1
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 3.9e-86 322.4 316 56.3
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.5e-85 320.5 314 55.1
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 5.6e-85 318.5 315 53.0
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 7.3e-85 318.2 316 55.4
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 7.3e-85 318.2 316 55.7
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.2e-82 310.8 316 54.1
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.5e-82 310.5 271 59.8
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.4e-82 309.3 314 54.1
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 3.4e-82 309.3 313 53.7
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 3.2e-80 302.8 320 54.4
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 2.7e-79 299.7 316 51.6
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.7e-79 299.7 313 51.1
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 3.0e-78 296.2 317 52.7
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 2.8e-76 289.7 313 54.3
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 4.8e-76 288.9 316 52.2
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.8e-75 287.0 317 53.0
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 1.8e-75 287.0 313 51.1
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 5.3e-75 285.4 267 54.7
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 9.0e-75 284.6 317 52.1
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 1.2e-74 284.3 265 55.1
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 7.6e-74 281.6 304 51.3
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.4e-72 276.6 317 51.4
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 3.5e-71 272.7 258 54.3
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 7.9e-71 271.6 316 50.3
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 1.0e-70 271.2 278 53.6
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.8e-70 270.4 261 53.6
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.3e-69 266.2 206 66.0
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 2.8e-68 263.1 315 47.3
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 8.1e-68 261.5 315 48.6
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 1.4e-64 250.8 204 61.8
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 1.9e-64 250.4 275 50.5
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.8e-60 236.5 316 46.2
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.2e-58 231.1 243 53.9
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.1e-51 208.0 314 42.7
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 6.9e-51 205.3 230 49.1
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.0e-49 201.4 271 45.0
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.1e-48 198.0 299 42.5
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.9e-48 197.2 297 39.7
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 2.2e-44 183.7 264 40.9
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 6.3e-44 182.2 187 53.5
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 9.1e-43 178.3 135 68.9
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 4.5e-42 176.0 144 61.8
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.3e-41 174.5 277 41.9
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 4.7e-39 166.0 262 37.8
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.1e-35 154.8 316 35.8
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 9.1e-35 151.8 123 62.6
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 2.6e-34 150.2 260 37.3
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 1.9e-32 144.1 120 64.2
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.3e-30 137.1 112 66.1
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.7e-28 129.8 106 60.4
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.1e-27 126.3 178 42.7
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.0e-26 124.0 178 42.1
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.0e-25 121.7 196 39.8
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.3e-25 121.3 120 52.5
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 5.0e-25 119.4 124 48.4
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.0e-22 111.7 319 31.0
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 4.8e-20 102.8 157 38.9
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.4e-19 99.4 145 40.0
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.5e-17 92.0 65 64.6
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 5.5e-16 89.4 113 45.1
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 9.4e-16 88.6 111 42.3
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.6e-15 87.8 137 38.7
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 5.9e-10 69.3 120 40.0
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.4e-06 58.2 83 43.4


User provided reference genes

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