Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 3.4e-91 338.2 158 100.0
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 1.3e-90 336.3 158 98.7
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 9.3e-89 330.1 158 96.2
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 9.3e-89 330.1 158 96.2
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 6.3e-85 317.4 158 91.8
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 4.3e-78 294.7 158 84.8
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 1.3e-77 293.1 158 84.8
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 3.8e-74 281.6 163 82.2
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 1.2e-72 276.6 144 86.8
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 7.9e-72 273.9 161 78.9
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 7.9e-72 273.9 161 77.6
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 3.0e-71 271.9 158 79.7
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 9.7e-70 266.9 158 77.8
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 9.7e-70 266.9 158 77.8
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 9.7e-70 266.9 158 77.8
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 9.7e-70 266.9 158 78.5
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 2.8e-69 265.4 158 77.2
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 3.7e-69 265.0 158 77.2
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 4.1e-68 261.5 160 73.8
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 2.9e-58 228.8 155 68.4
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 4.5e-51 204.9 144 68.8
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 5.9e-51 204.5 115 82.6
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.3e-50 203.4 163 59.5
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 1.2e-48 196.8 116 81.0
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 4.5e-35 151.8 135 54.1
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 1.7e-29 133.3 149 43.0
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 1.7e-29 133.3 149 43.0
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 5.4e-28 128.3 149 40.3
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 9.2e-28 127.5 159 45.3
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 1.6e-27 126.7 149 40.3
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 2.0e-27 126.3 149 40.3
CARHR187310 Cardamine hirsuta HOM05D008373 ORTHO05D010873 4.6e-27 125.2 79 69.6
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 5.9e-27 124.8 150 40.7
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 6.6e-26 121.3 150 42.0
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 3.6e-24 115.5 150 40.7
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 4.7e-24 115.2 146 44.5
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 1.0e-23 114.0 150 39.3
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 1.4e-23 113.6 150 39.3
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 1.8e-23 113.2 150 40.7
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 1.8e-23 113.2 150 38.7
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 1.8e-23 113.2 150 38.7
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 2.3e-23 112.8 150 38.7
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 5.2e-23 111.7 150 38.7
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 5.2e-23 111.7 156 38.5
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 2.0e-22 109.8 150 38.0
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 4.9e-21 105.1 148 38.5
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 7.5e-14 81.3 126 36.5
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 2.2e-13 79.7 125 35.2
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 2.2e-13 79.7 107 38.3
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 8.3e-13 77.8 125 32.0
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 1.1e-12 77.4 125 32.0
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 1.1e-12 77.4 125 32.0
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 1.1e-12 77.4 125 32.0
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 1.9e-12 76.6 125 32.0
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 4.1e-12 75.5 125 32.8
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 7.1e-12 74.7 124 31.5
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 2.7e-11 72.8 124 31.5
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 1.7e-10 70.1 152 27.6
FAN15G1242 Fragaria x ananassa HOM05D000070 ORTHO05D003190 8.9e-07 57.8 151 31.8
FvH4_2g19690 Fragaria vesca HOM05D000256 ORTHO05D000119 2.6e-06 56.2 141 33.3
FAN24G1258 Fragaria x ananassa HOM05D009280 ORTHO05D012103 5.8e-06 55.1 141 33.3


User provided reference genes

Program Settings