Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p40850 Brassica napus HOM05D042094 ORTHO05D033656 8.1e-42 173.3 88 100.0
BolC7t44610H Brassica oleracea HOM05D042094 ORTHO05D033656 2.2e-31 138.7 67 100.0
Sp5g04400 Schrenkiella parvula HOM05D000521 ORTHO05D000384 1.4e-17 92.8 61 80.3
BcaB02g08261 Brassica carinata HOM05D000521 ORTHO05D000384 3.1e-17 91.7 61 80.3
BcaC02g10010 Brassica carinata HOM05D000521 ORTHO05D000384 3.1e-17 91.7 61 80.3
A04p02560 Brassica napus HOM05D000521 ORTHO05D000384 3.1e-17 91.7 61 80.3
C04p33990 Brassica napus HOM05D000521 ORTHO05D000384 3.1e-17 91.7 61 80.3
BolC4t24966H Brassica oleracea HOM05D000521 ORTHO05D000384 3.1e-17 91.7 61 80.3
BraA04t15983Z Brassica rapa HOM05D000521 ORTHO05D000384 3.1e-17 91.7 61 80.3
Thhalv10005868m.g Eutrema salsugineum HOM05D000521 ORTHO05D000384 2.0e-16 89.0 62 80.6
Carub.0005s2522 Capsella rubella HOM05D000521 ORTHO05D000384 2.2e-15 85.5 62 75.8
CARHR168870 Cardamine hirsuta HOM05D000521 ORTHO05D000384 6.5e-15 84.0 62 75.8
AT3G58480 Arabidopsis thaliana HOM05D000521 ORTHO05D000384 7.2e-14 80.5 62 72.6
AL5G40240 Arabidopsis lyrata HOM05D000521 ORTHO05D000384 9.4e-14 80.1 62 72.6
Aa31LG10G13040 Aethionema arabicum HOM05D000521 ORTHO05D000384 4.6e-13 77.8 58 74.1
THA.LOC104802789 Tarenaya hassleriana HOM05D000521 ORTHO05D000384 3.1e-09 65.1 56 64.3
A09p51040 Brassica napus HOM05D002435 ORTHO05D002550 2.0e-08 62.4 39 79.5
CARHR218410 Cardamine hirsuta HOM05D042094 ORTHO05D033656 2.2e-07 58.9 51 64.7
TWI74G1632 Tripterygium wilfordii HOM05D000521 ORTHO05D000384 5.5e-06 54.3 70 50.0


User provided reference genes

Program Settings