Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p40660 Brassica napus HOM05D000096 ORTHO05D015528 5.2e-34 147.1 74 100.0
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 2.1e-27 125.2 74 83.8
BolC8t47719H Brassica oleracea HOM05D000096 ORTHO05D000045 2.4e-26 121.7 74 82.4
A03p36950 Brassica napus HOM05D000096 ORTHO05D000045 4.0e-26 120.9 74 82.4
BolC5t30507H Brassica oleracea HOM05D000096 ORTHO05D015528 4.0e-26 120.9 74 82.4
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 6.9e-26 120.2 74 81.1
C02p57080 Brassica napus HOM05D000096 ORTHO05D015528 1.2e-25 119.4 74 78.4
BolC3t17673H Brassica oleracea HOM05D000096 ORTHO05D000045 5.8e-25 117.1 73 78.1
BraA03t12857Z Brassica rapa HOM05D000096 ORTHO05D000045 5.8e-25 117.1 74 79.7
C09p33530 Brassica napus HOM05D000096 ORTHO05D000045 2.4e-23 111.7 73 74.0
C03p68010 Brassica napus HOM05D000096 ORTHO05D000045 4.2e-23 110.9 74 71.6
C04p40440 Brassica napus HOM05D000096 ORTHO05D000045 9.0e-18 93.2 74 56.8
BolC1t03160H Brassica oleracea HOM05D000096 ORTHO05D015528 9.0e-18 93.2 74 56.8
BolC4t25624H Brassica oleracea HOM05D000096 ORTHO05D000045 9.0e-18 93.2 74 56.8
BolC7t43563H Brassica oleracea HOM05D000096 ORTHO05D000045 9.0e-18 93.2 74 56.8
C01p43790 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-17 92.8 74 56.8
C01p48130 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-16 88.6 73 58.9
C07p15510 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-16 88.6 74 54.1
BolC8t46902H Brassica oleracea HOM05D000096 ORTHO05D000045 2.2e-16 88.6 73 58.9
C09p33210 Brassica napus HOM05D000096 ORTHO05D000045 4.9e-16 87.4 74 52.7
BraA09t39509Z Brassica rapa HOM05D000096 ORTHO05D000045 1.4e-15 85.9 74 51.4
C04p49100 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-15 85.5 74 51.4
C05p18000 Brassica napus HOM05D000096 ORTHO05D027797 3.2e-15 84.7 52 76.9
C05p17960 Brassica napus HOM05D000096 ORTHO05D000045 9.3e-15 83.2 74 50.0
BolC5t30504H Brassica oleracea HOM05D000096 ORTHO05D000045 9.3e-15 83.2 74 50.0
THA.LOC104810215 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 1.5e-12 75.9 73 49.3
BraA07t28252Z Brassica rapa HOM05D000096 ORTHO05D015528 2.5e-12 75.1 48 72.9
THA.LOC104814022 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 6.2e-11 70.5 73 46.6
PSO675G3398 Papaver somniferum HOM05D000096 ORTHO05D000045 1.2e-09 66.2 67 49.3
C03p67800 Brassica napus HOM05D000096 ORTHO05D000045 2.6e-09 65.1 68 50.0
C09p55220 Brassica napus HOM05D000096 ORTHO05D000045 3.4e-09 64.7 70 47.1
C02p26870 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-08 62.0 70 45.7
BolC4t25482H Brassica oleracea HOM05D000096 ORTHO05D000045 3.8e-08 61.2 68 47.1
Aqoxy1G02587 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 1.1e-07 59.7 66 45.5
C04p39080 Brassica napus HOM05D000096 ORTHO05D000045 1.1e-07 59.7 68 47.1
C06p14810 Brassica napus HOM05D000096 ORTHO05D000045 1.4e-07 59.3 70 44.3
BolC6t36659H Brassica oleracea HOM05D000096 ORTHO05D000045 1.4e-07 59.3 70 44.3
CARHR101910 Cardamine hirsuta HOM05D000096 ORTHO05D000045 1.4e-07 59.3 74 43.2
BolC7t42659H Brassica oleracea HOM05D000096 ORTHO05D000045 4.2e-07 57.8 68 39.7
THA.LOC104813375 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 4.2e-07 57.8 47 55.3
CARHR217630 Cardamine hirsuta HOM05D000096 ORTHO05D000045 5.5e-07 57.4 67 41.8
Hma1.2p1_0044F.1_g026040 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 5.5e-07 57.4 67 41.8
COL.COLO4_29959 Corchorus olitorius HOM05D000096 ORTHO05D000045 9.3e-07 56.6 72 38.9
PSO170G3329 Papaver somniferum HOM05D000096 ORTHO05D000045 9.3e-07 56.6 72 44.4
TPR.G14138 Trifolium pratense HOM05D000096 ORTHO05D000045 1.6e-06 55.8 62 41.9
COL.COLO4_06410 Corchorus olitorius HOM05D000096 ORTHO05D000045 2.1e-06 55.5 72 38.9
LjContig00141g0020716 Lotus japonicus HOM05D000096 ORTHO05D000045 2.7e-06 55.1 59 45.8
Medtr6g452450 Medicago truncatula HOM05D000096 ORTHO05D000045 2.7e-06 55.1 67 38.8
TPR.G15489 Trifolium pratense HOM05D000096 ORTHO05D000045 2.7e-06 55.1 66 42.4
Medtr6g008045 Medicago truncatula HOM05D000096 ORTHO05D000045 3.5e-06 54.7 67 40.3
PSO210G7138 Papaver somniferum HOM05D000096 ORTHO05D000045 4.6e-06 54.3 73 41.1
PSO729G0123 Papaver somniferum HOM05D000096 ORTHO05D000045 4.6e-06 54.3 71 40.8
Medtr4g120080 Medicago truncatula HOM05D000096 ORTHO05D000045 6.0e-06 53.9 67 38.8
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 6.0e-06 53.9 68 39.7
Medtr4g096800 Medicago truncatula HOM05D000096 ORTHO05D000045 7.9e-06 53.5 67 38.8


User provided reference genes

Program Settings