Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p40300 Brassica napus HOM05D000023 ORTHO05D000014 8.7e-102 373.6 186 100.0
BcaC08g44948 Brassica carinata HOM05D000023 ORTHO05D000014 2.1e-92 342.4 181 96.1
C06p25790 Brassica napus HOM05D000023 ORTHO05D000014 2.1e-92 342.4 181 96.1
C02p50440 Brassica napus HOM05D000023 ORTHO05D000014 3.6e-92 341.7 181 92.3
BraA09t37417Z Brassica rapa HOM05D000023 ORTHO05D000014 2.6e-90 335.5 178 94.4
A06p21240 Brassica napus HOM05D000554 ORTHO05D011030 1.7e-73 279.6 181 78.5
A01p38030 Brassica napus HOM05D000023 ORTHO05D000014 2.9e-73 278.9 181 77.3
BolC9t57982H Brassica oleracea HOM05D000023 ORTHO05D000014 1.0e-70 270.4 182 73.1
A05p26100 Brassica napus HOM05D000023 ORTHO05D000014 3.3e-69 265.4 181 76.2
C09p51190 Brassica napus HOM05D000023 ORTHO05D000014 2.8e-68 262.3 181 74.0
BraA06t25311Z Brassica rapa HOM05D000023 ORTHO05D000014 2.6e-66 255.8 181 74.0
BolC3t16229H Brassica oleracea HOM05D000023 ORTHO05D000014 4.5e-66 255.0 135 98.5
BolC6t37741H Brassica oleracea HOM05D000023 ORTHO05D000014 7.9e-63 244.2 129 99.2
BolC2t11123H Brassica oleracea HOM05D000023 ORTHO05D000014 6.7e-62 241.1 130 92.3
A08p11410 Brassica napus HOM05D000023 ORTHO05D000014 7.4e-61 237.7 149 85.9
BolC2t12125H Brassica oleracea HOM05D000023 ORTHO05D000014 9.7e-61 237.3 130 96.2
BolC5t30751H Brassica oleracea HOM05D000023 ORTHO05D000014 4.5e-50 201.8 161 62.1
C03p28870 Brassica napus HOM05D000023 ORTHO05D000014 5.7e-45 184.9 176 61.4
BcaB08g36197 Brassica carinata HOM05D000023 ORTHO05D000014 3.7e-44 182.2 181 57.5
C09p38450 Brassica napus HOM05D000023 ORTHO05D000014 7.7e-34 147.9 98 72.4
BolC9t56699H Brassica oleracea HOM05D000023 ORTHO05D000014 7.7e-34 147.9 98 72.4
BcaB03g15143 Brassica carinata HOM05D000023 ORTHO05D000014 3.6e-31 139.0 159 46.5
A09p32160 Brassica napus HOM05D000023 ORTHO05D000014 4.7e-31 138.7 156 46.8
BraA09t38762Z Brassica rapa HOM05D000023 ORTHO05D000014 4.7e-31 138.7 156 46.8
EL10Ac8g19642 Beta vulgaris HOM05D000023 ORTHO05D000014 1.7e-28 130.2 155 43.9
BolC9t53194H Brassica oleracea HOM05D000023 ORTHO05D000014 2.2e-28 129.8 132 47.0
BraA06t27742Z Brassica rapa HOM05D000023 ORTHO05D000014 6.3e-28 128.3 138 52.2
C05p20530 Brassica napus HOM05D000023 ORTHO05D000014 8.3e-28 127.9 86 69.8
EL10Ac4g08499 Beta vulgaris HOM05D000023 ORTHO05D000014 1.4e-27 127.1 165 40.6
BcaC05g26071 Brassica carinata HOM05D000023 ORTHO05D000014 3.8e-25 119.0 92 73.9
BcaC07g37344 Brassica carinata HOM05D000023 ORTHO05D000014 7.2e-24 114.8 82 65.9
BolC9t57468H Brassica oleracea HOM05D000023 ORTHO05D000014 2.1e-23 113.2 136 51.5
BcaC04g23982 Brassica carinata HOM05D000023 ORTHO05D000014 3.6e-23 112.5 82 61.0
BcaC04g23981 Brassica carinata HOM05D000023 ORTHO05D000014 1.4e-22 110.5 80 61.2
Hma1.2p1_2277F.1_g318670 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.2e-22 108.6 166 36.7
BraA09t39254Z Brassica rapa HOM05D000023 ORTHO05D000014 8.9e-22 107.8 137 52.6
BcaC01g00960 Brassica carinata HOM05D000023 ORTHO05D000014 1.5e-21 107.1 133 41.4
Hund05171 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.0e-21 106.7 180 37.2
HanXRQChr07g0186221 Helianthus annuus HOM05D000023 ORTHO05D000014 4.4e-21 105.5 151 40.4
Thhalv10012187m.g Eutrema salsugineum HOM05D026077 ORTHO05D032958 5.7e-21 105.1 149 36.9
Hund18176 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.5e-21 104.8 175 37.7
Hund22686 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.8e-21 104.4 175 37.7
Hund06285 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-20 104.0 175 37.7
Hund04194 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-20 103.6 175 37.7
Hund04838 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-20 103.6 180 36.1
Hund10386 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-20 103.6 175 37.7
Hund22984 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-20 103.6 175 37.7
Hund23411 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-20 103.6 175 37.7
Hund25526 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-20 103.6 175 37.7
Hund26626 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-20 103.6 175 37.7
Hund31071 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-20 103.6 175 37.7
Hma1.2p1_0490F.1_g164210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.2e-20 103.2 170 35.3
Hund11026 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.2e-20 103.2 180 35.6
Hund18264 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.2e-20 103.2 175 36.6
Hund10515 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.7e-20 102.4 180 36.1
Hund30522 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.7e-20 102.4 175 37.1
Hund12079 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-20 102.1 175 37.1
Hund23957 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-20 102.1 175 37.1
Hund04191 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.3e-20 101.7 175 37.7
Hund00488 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.3e-20 101.3 195 35.9
Hund24696 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.3e-20 101.3 180 35.6
Hund24914 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.3e-20 101.3 198 35.9
Hund13497 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.1e-19 100.9 175 36.6
Hund15093 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.1e-19 100.9 174 37.9
Hund15138 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.1e-19 100.9 175 37.7
Hund31325 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.1e-19 100.9 175 37.1
Hund11626 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.4e-19 100.5 175 36.6
Hund04442 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-19 99.8 180 35.0
Hund13150 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.1e-19 99.4 176 35.8
Hund14805 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.4e-19 98.6 198 35.4
Hund14796 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-18 97.1 182 34.6
Hund31004 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.0e-18 96.7 180 34.4
THA.LOC104820419 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 2.7e-18 96.3 151 37.1
AL7G46890 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 3.5e-18 95.9 116 45.7
BcaC09g49277 Brassica carinata HOM05D000023 ORTHO05D000014 4.5e-18 95.5 127 44.1
BcaC02g10465 Brassica carinata HOM05D000023 ORTHO05D000014 7.8e-18 94.7 102 56.9
Hund01885 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-17 94.0 177 35.0
QL02p096245 Quercus lobata HOM05D000023 ORTHO05D000014 2.5e-16 89.7 160 36.9
Hund01251 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.3e-16 89.0 170 35.3
QL10p011117 Quercus lobata HOM05D000023 ORTHO05D000014 1.2e-15 87.4 155 38.1
A07p03820 Brassica napus HOM05D000023 ORTHO05D000014 2.1e-15 86.7 91 54.9
QL04p080373 Quercus lobata HOM05D000023 ORTHO05D000014 4.7e-15 85.5 163 37.4
Hund14515 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.0e-15 84.7 176 33.5
MSTRG.23368 Avicennia marina HOM05D000023 ORTHO05D000014 2.3e-14 83.2 174 29.3
AL2G12480 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 6.8e-14 81.6 78 48.7
Hund16692 Selenicereus undatus HOM05D000023 ORTHO05D005162 6.8e-14 81.6 146 37.0
Hund30017 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.8e-14 81.6 146 37.0
SHI21514 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-13 80.1 184 31.0
Hund15523 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.6e-13 79.7 151 34.4
Hund22426 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.6e-13 79.7 151 34.4
C05p32220 Brassica napus HOM05D000023 ORTHO05D000014 2.9e-12 76.3 51 64.7
BolC5t31953H Brassica oleracea HOM05D000023 ORTHO05D000014 2.9e-12 76.3 51 64.7
CSS0005925 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.9e-12 76.3 187 27.8
CSS0049915 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.9e-12 76.3 185 29.2
Sopen10g005310 Solanum pennellii HOM05D000023 ORTHO05D000014 4.9e-12 75.5 172 30.2
Sopen10g007400 Solanum pennellii HOM05D000023 ORTHO05D000014 4.9e-12 75.5 172 30.2
Sopen01g050040 Solanum pennellii HOM05D000023 ORTHO05D000014 1.4e-11 73.9 172 30.2
SHI03890 Sapria himalayana HOM05D000023 ORTHO05D000014 1.9e-11 73.6 102 42.2
THA.LOC104804899 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 1.9e-11 73.6 187 32.1
BcaC07g37282 Brassica carinata HOM05D026077 ORTHO05D000014 9.2e-11 71.2 77 50.6
SHI25011 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 71.2 179 27.9
BcaC05g27302 Brassica carinata HOM05D000023 ORTHO05D000014 1.2e-10 70.9 95 44.2
Sopen01g010490 Solanum pennellii HOM05D000023 ORTHO05D000014 1.6e-10 70.5 175 29.7
Sed0008376 Sechium edule HOM05D000023 ORTHO05D000014 2.0e-10 70.1 170 30.0
SHI30372 Sapria himalayana HOM05D000023 ORTHO05D000014 2.7e-10 69.7 189 29.1
Lj1g0008556 Lotus japonicus HOM05D000023 ORTHO05D000014 3.5e-10 69.3 177 31.6
CSS0016050 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.0e-10 68.6 160 32.5
SHI36418 Sapria himalayana HOM05D000023 ORTHO05D000014 7.8e-10 68.2 175 29.1
CSS0034207 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.7e-09 67.0 178 28.1
CSS0026234 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.3e-09 66.6 159 30.8
MBI06_g04760_MAGBIO Magnolia biondii HOM05D008170 ORTHO05D010746 3.0e-09 66.2 108 38.9
SHI16918 Sapria himalayana HOM05D003924 ORTHO05D005216 5.0e-09 65.5 74 44.6
PGR142G2542 Punica granatum HOM05D000023 ORTHO05D000014 6.6e-09 65.1 163 30.1
Hund08544 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-09 64.7 149 30.2
arahy.Tifrunner.gnm1.ann1.YG44LD Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-08 63.9 173 29.5
Hund20670 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.5e-08 63.9 162 32.1
PGR042G3428 Punica granatum HOM05D000023 ORTHO05D000014 3.3e-08 62.8 186 27.4
PGR044G1170 Punica granatum HOM05D000023 ORTHO05D000014 3.3e-08 62.8 143 32.9
SHI32655 Sapria himalayana HOM05D000023 ORTHO05D024958 3.3e-08 62.8 88 42.0
Dinv14196 Davidia involucrata HOM05D009083 ORTHO05D005075 5.6e-08 62.0 181 27.6
Nn1g09269 Nelumbo nucifera HOM05D000023 ORTHO05D000014 5.6e-08 62.0 177 29.9
PGR102G0008 Punica granatum HOM05D000023 ORTHO05D000014 7.3e-08 61.6 180 28.3
Lj1P332T15 Lonicera japonica HOM05D000023 ORTHO05D000014 1.2e-07 60.8 162 26.5
Lj9C56T3 Lonicera japonica HOM05D000023 ORTHO05D002750 1.2e-07 60.8 129 31.0
PGR004G2136 Punica granatum HOM05D000023 ORTHO05D000014 1.2e-07 60.8 186 26.9
PGR044G2632 Punica granatum HOM05D000023 ORTHO05D000014 1.2e-07 60.8 141 27.7
Aqoxy5G01955 Aquilegia oxysepala HOM05D009083 ORTHO05D010901 1.6e-07 60.5 118 33.1
Lj8P661T5 Lonicera japonica HOM05D000023 ORTHO05D002750 1.6e-07 60.5 129 30.2
PGR031G2723 Punica granatum HOM05D000023 ORTHO05D000014 1.6e-07 60.5 187 29.4
Glyma.07G171900 Glycine max HOM05D000023 ORTHO05D000014 2.1e-07 60.1 185 28.6
Nitab4.5_0002586g0050 Nicotiana tabacum HOM05D000023 ORTHO05D002750 2.1e-07 60.1 98 35.7
PGR142G0273 Punica granatum HOM05D000023 ORTHO05D000014 2.1e-07 60.1 163 28.8
SHI25354 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-07 60.1 169 26.6
Hund18019 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.1e-07 60.1 122 33.6
MELO3C022886.2 Cucumis melo HOM05D000023 ORTHO05D002750 2.8e-07 59.7 100 37.0
Lj8P655T9 Lonicera japonica HOM05D000023 ORTHO05D002750 3.6e-07 59.3 129 30.2
TWI63G1250 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.6e-07 59.3 165 28.5
SHI15393 Sapria himalayana HOM05D000023 ORTHO05D000014 4.7e-07 58.9 133 32.3
CSS0017113 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.2e-07 58.5 159 27.7
Lj6P498T15 Lonicera japonica HOM05D000023 ORTHO05D002750 6.2e-07 58.5 129 30.2
Lj2C491G6 Lonicera japonica HOM05D000023 ORTHO05D002750 8.0e-07 58.2 129 29.5
Atru.chr12.1140 Acer truncatum HOM05D000023 ORTHO05D009195 1.1e-06 57.8 71 45.1
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-06 57.4 59 49.2
TWI38G0158 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.4e-06 57.4 71 42.3
SHI12076 Sapria himalayana HOM05D007023 ORTHO05D008684 2.3e-06 56.6 135 30.4
SHI12545 Sapria himalayana HOM05D000023 ORTHO05D000014 2.3e-06 56.6 105 37.1
SHI19411 Sapria himalayana HOM05D002606 ORTHO05D000014 2.3e-06 56.6 88 40.9
Sp5g18760 Schrenkiella parvula HOM05D000023 ORTHO05D000014 2.3e-06 56.6 95 34.7
PGR102G0123 Punica granatum HOM05D000023 ORTHO05D000014 3.1e-06 56.2 163 28.2
QL04p050699 Quercus lobata HOM05D000023 ORTHO05D000014 3.1e-06 56.2 94 37.2
Prupe.2G058600 Prunus persica HOM05D000023 ORTHO05D000014 4.0e-06 55.8 71 42.3
SHI05602 Sapria himalayana HOM05D000023 ORTHO05D000014 4.0e-06 55.8 86 38.4
PGR042G1224 Punica granatum HOM05D000023 ORTHO05D000014 5.2e-06 55.5 129 30.2
SGA_v2.0_scaffold327G48774 Striga asiatica HOM05D000023 ORTHO05D000014 5.2e-06 55.5 103 35.9
Zm00001eb398480 Zea mays HOM05D000023 ORTHO05D010901 5.2e-06 55.5 128 28.9
Lj2P444T7 Lonicera japonica HOM05D000023 ORTHO05D002750 8.9e-06 54.7 66 37.9
Lj9P644T38 Lonicera japonica HOM05D000023 ORTHO05D002750 8.9e-06 54.7 161 25.5
Lj9P677T25 Lonicera japonica HOM05D000023 ORTHO05D002750 8.9e-06 54.7 104 31.7
TPR.G8629 Trifolium pratense HOM05D000023 ORTHO05D000014 8.9e-06 54.7 143 30.8


User provided reference genes

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