Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p40070 Brassica napus HOM05D003473 ORTHO05D003872 5.0e-66 254.2 121 100.0
BolC7t44543H Brassica oleracea HOM05D003473 ORTHO05D003872 5.0e-66 254.2 121 100.0
BcaNung02115 Brassica carinata HOM05D003473 ORTHO05D003872 2.5e-65 251.9 119 100.0
BraA06t26728Z Brassica rapa HOM05D003473 ORTHO05D003872 2.9e-50 201.8 108 89.8
A06p38150 Brassica napus HOM05D003473 ORTHO05D003872 8.5e-50 200.3 108 89.8
BcaC06g30691 Brassica carinata HOM05D003473 ORTHO05D003872 2.5e-49 198.7 108 88.0
BcaNung02116 Brassica carinata HOM05D003473 ORTHO05D003872 7.2e-49 197.2 110 87.3
C07p40060 Brassica napus HOM05D003473 ORTHO05D003872 7.2e-49 197.2 110 87.3
BolC7t44541H Brassica oleracea HOM05D003473 ORTHO05D003872 7.2e-49 197.2 110 87.3
BcaC04g23717 Brassica carinata HOM05D003473 ORTHO05D003872 2.2e-45 185.7 111 79.3
Sp2g19990 Schrenkiella parvula HOM05D003473 ORTHO05D003872 3.7e-45 184.9 110 79.1
A09p05020 Brassica napus HOM05D003473 ORTHO05D003872 4.8e-45 184.5 112 79.5
C09p05430 Brassica napus HOM05D003473 ORTHO05D003872 4.8e-45 184.5 111 78.4
BcaB04g19636 Brassica carinata HOM05D003473 ORTHO05D003872 6.3e-45 184.1 111 77.5
Carub.0006s2613 Capsella rubella HOM05D003473 ORTHO05D003872 6.3e-45 184.1 109 78.9
AT5G28910 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 1.1e-44 183.3 110 78.2
CARHR185420 Cardamine hirsuta HOM05D003473 ORTHO05D003872 5.4e-44 181.0 110 79.1
BolC9t53472H Brassica oleracea HOM05D003473 ORTHO05D003872 1.2e-43 179.9 109 78.0
Carub.0007s3766 Capsella rubella HOM05D003473 ORTHO05D003872 2.0e-43 179.1 110 78.2
Thhalv10003947m.g Eutrema salsugineum HOM05D003473 ORTHO05D003872 2.0e-43 179.1 114 75.4
BraA09t36141Z Brassica rapa HOM05D003473 ORTHO05D003872 3.5e-43 178.3 109 76.1
AL6G40940 Arabidopsis lyrata HOM05D003473 ORTHO05D003872 4.5e-43 177.9 110 76.4
AT5G28960 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 4.5e-43 177.9 111 73.9
Carub.0006s2614 Capsella rubella HOM05D003473 ORTHO05D003872 2.5e-41 172.2 111 73.9
Aa31LG11G8510 Aethionema arabicum HOM05D003473 ORTHO05D003872 6.8e-39 164.1 108 71.3
Lsat_1_v5_gn_2_108280 Lactuca sativa HOM05D003473 ORTHO05D003872 3.1e-36 155.2 113 64.6
Aa31LG5G14900 Aethionema arabicum HOM05D003473 ORTHO05D003872 7.0e-36 154.1 109 67.9
arahy.Tifrunner.gnm1.ann1.F06EBP Arachis hypogaea HOM05D003473 ORTHO05D003872 9.2e-36 153.7 113 63.7
arahy.Tifrunner.gnm1.ann1.T51LW4 Arachis hypogaea HOM05D003473 ORTHO05D003872 9.2e-36 153.7 113 63.7
FvH4_6g01760 Fragaria vesca HOM05D003473 ORTHO05D003872 1.6e-35 152.9 113 60.2
Duzib177G0657 Durio zibethinus HOM05D003473 ORTHO05D003872 2.7e-35 152.1 113 60.2
A03p39790 Brassica napus HOM05D003473 ORTHO05D003872 3.5e-35 151.8 73 95.9
THA.LOC104820771 Tarenaya hassleriana HOM05D003473 ORTHO05D003872 3.5e-35 151.8 114 64.0
QL03p029857 Quercus lobata HOM05D003473 ORTHO05D003872 4.5e-35 151.4 113 61.9
CANSAT54G3011 Cannabis sativa HOM05D003473 ORTHO05D003872 5.9e-35 151.0 113 61.9
Dinv15516 Davidia involucrata HOM05D003473 ORTHO05D003872 1.0e-34 150.2 113 60.2
Dinv25278 Davidia involucrata HOM05D003473 ORTHO05D003872 1.0e-34 150.2 113 60.2
Nn1g02856 Nelumbo nucifera HOM05D003473 ORTHO05D003872 1.0e-34 150.2 113 59.3
FAN14G1733 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.3e-34 149.8 113 59.3
FAN09G4673 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.7e-34 149.4 113 59.3
FAN14G5108 Fragaria x ananassa HOM05D003473 ORTHO05D003872 2.3e-34 149.1 113 58.4
Cpa.g.sc306.6 Carica papaya HOM05D003473 ORTHO05D003872 2.9e-34 148.7 113 60.2
PGR142G0316 Punica granatum HOM05D003473 ORTHO05D003872 2.9e-34 148.7 113 62.8
Carub.0006s2615 Capsella rubella HOM05D003473 ORTHO05D003872 3.8e-34 148.3 99 72.7
FAN05G2419 Fragaria x ananassa HOM05D003473 ORTHO05D003872 3.8e-34 148.3 114 58.8
Medtr1g080320 Medicago truncatula HOM05D003473 ORTHO05D003872 5.0e-34 147.9 113 60.2
TAR362G0719 Trochodendron aralioides HOM05D003473 ORTHO05D003872 5.0e-34 147.9 113 59.3
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 6.6e-34 147.5 113 60.2
Lj5g0017612 Lotus japonicus HOM05D003473 ORTHO05D003872 6.6e-34 147.5 115 59.1
Prupe.6G350700 Prunus persica HOM05D003473 ORTHO05D003872 6.6e-34 147.5 113 59.3
FAN02G1417 Fragaria x ananassa HOM05D003473 ORTHO05D003872 8.6e-34 147.1 113 58.4
Glyma.03G250300 Glycine max HOM05D003473 ORTHO05D003872 8.6e-34 147.1 113 61.9
RcHm_v2.0_Chr3g0449501 Rosa chinensis HOM05D003473 ORTHO05D003872 8.6e-34 147.1 114 58.8
Ciclev10019419m.g Citrus clementina HOM05D003473 ORTHO05D003872 1.5e-33 146.4 114 60.5
VMungo0720G0613 Vigna mungo HOM05D003473 ORTHO05D003872 1.5e-33 146.4 114 59.6
MSTRG.314 Avicennia marina HOM05D003473 ORTHO05D003872 1.9e-33 146.0 109 59.6
Glyma.10G165600 Glycine max HOM05D003473 ORTHO05D003872 1.9e-33 146.0 114 58.8
Manes.08G140000 Manihot esculenta HOM05D003473 ORTHO05D003872 1.9e-33 146.0 113 61.1
Medtr7g115570 Medicago truncatula HOM05D003473 ORTHO05D003872 1.9e-33 146.0 115 60.0
Thecc.05G270100 Theobroma cacao HOM05D003473 ORTHO05D003872 1.9e-33 146.0 113 56.6
Haze_04416 Corylus avellana HOM05D003473 ORTHO05D003872 2.5e-33 145.6 113 60.2
Eucgr.B02153 Eucalyptus grandis HOM05D003473 ORTHO05D003872 2.5e-33 145.6 113 57.5
Potri.019G019800 Populus trichocarpa HOM05D003473 ORTHO05D003872 2.5e-33 145.6 112 60.7
Actinidia38935 Actinidia chinensis HOM05D003473 ORTHO05D003872 3.3e-33 145.2 113 58.4
CiPaw.07G073400 Carya illinoinensis HOM05D003473 ORTHO05D003872 3.3e-33 145.2 113 57.5
FAN05G0941 Fragaria x ananassa HOM05D003473 ORTHO05D003872 3.3e-33 145.2 114 57.9
Glyma.20G223600 Glycine max HOM05D003473 ORTHO05D003872 4.3e-33 144.8 114 58.8
MD12G1249300 Malus domestica HOM05D003473 ORTHO05D003872 4.3e-33 144.8 113 58.4
Aqoxy2G03708 Aquilegia oxysepala HOM05D003473 ORTHO05D003872 5.6e-33 144.4 113 61.1
arahy.Tifrunner.gnm1.ann1.K8P0T6 Arachis hypogaea HOM05D003473 ORTHO05D003872 5.6e-33 144.4 116 58.6
Duzib128G0977 Durio zibethinus HOM05D003473 ORTHO05D003872 5.6e-33 144.4 112 57.1
GSVIVG01023451001 Vitis vinifera HOM05D003473 ORTHO05D003872 5.6e-33 144.4 113 59.3
Cfa006361 Carpinus fangiana HOM05D003473 ORTHO05D003872 7.3e-33 144.1 113 58.4
HPP92_020845 Vanilla planifolia HOM05D003473 ORTHO05D003872 7.3e-33 144.1 113 60.2
MSTRG.8227 Avicennia marina HOM05D003473 ORTHO05D003872 9.5e-33 143.7 112 55.4
HanXRQChr14g0454231 Helianthus annuus HOM05D003473 ORTHO05D003872 9.5e-33 143.7 113 60.2
Lj2C44G25 Lonicera japonica HOM05D003473 ORTHO05D003872 9.5e-33 143.7 114 56.1
MD04G1231000 Malus domestica HOM05D003473 ORTHO05D003872 9.5e-33 143.7 113 57.5
Cc02_g08740 Coffea canephora HOM05D003473 ORTHO05D003872 1.2e-32 143.3 113 57.5
MELO3C008699.2 Cucumis melo HOM05D003473 ORTHO05D003872 1.2e-32 143.3 113 58.4
Lj3g0009325 Lotus japonicus HOM05D003473 ORTHO05D003872 1.2e-32 143.3 109 58.7
Lalb_Chr06g0168251 Lupinus albus HOM05D003473 ORTHO05D003872 1.2e-32 143.3 113 58.4
Sc20g0000670 Simmondsia chinensis HOM05D003473 ORTHO05D003872 1.2e-32 143.3 113 57.5
Lalb_Chr02g0149051 Lupinus albus HOM05D003473 ORTHO05D003872 2.1e-32 142.5 113 57.5
PSO017G4386 Papaver somniferum HOM05D003473 ORTHO05D003872 2.1e-32 142.5 113 57.5
TWI36G0550 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 2.1e-32 142.5 113 58.4
PSO063G4417 Papaver somniferum HOM05D003473 ORTHO05D003872 2.8e-32 142.1 113 58.4
Sed0013546 Sechium edule HOM05D003473 ORTHO05D003872 2.8e-32 142.1 113 56.6
ClCG11G010530 Citrullus lanatus HOM05D003473 ORTHO05D003872 3.6e-32 141.7 113 57.5
Gohir.A11G246500 Gossypium hirsutum HOM05D003473 ORTHO05D003872 3.6e-32 141.7 113 54.9
DCAR_030978 Daucus carota HOM05D003473 ORTHO05D003872 4.7e-32 141.4 115 55.7
Phvul.L001660 Phaseolus vulgaris HOM05D003473 ORTHO05D003872 4.7e-32 141.4 114 57.0
TPR.G22327 Trifolium pratense HOM05D003473 ORTHO05D003872 4.7e-32 141.4 114 57.9
Ca_09457_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 6.1e-32 141.0 115 58.3
Potri.013G047600 Populus trichocarpa HOM05D003473 ORTHO05D003872 6.1e-32 141.0 113 56.6
TPR.G6958 Trifolium pratense HOM05D003473 ORTHO05D003872 6.1e-32 141.0 115 58.3
AUR62004830 Chenopodium quinoa HOM05D003473 ORTHO05D003872 1.0e-31 140.2 115 58.3
MBI07_g22622_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 1.0e-31 140.2 113 56.6
CsaV3_2G009860 Cucumis sativus L. HOM05D003473 ORTHO05D003872 1.4e-31 139.8 113 56.6
Gohir.D11G256800 Gossypium hirsutum HOM05D003473 ORTHO05D003872 1.4e-31 139.8 113 54.0
Gorai.007G275200 Gossypium raimondii HOM05D003473 ORTHO05D003872 1.4e-31 139.8 113 54.0
Sabra13G0043500 Salix brachista HOM05D003473 ORTHO05D003872 1.4e-31 139.8 113 58.4
Nitab4.5_0011129g0030 Nicotiana tabacum HOM05D003473 ORTHO05D003872 1.8e-31 139.4 112 57.1
AUR62040917 Chenopodium quinoa HOM05D003473 ORTHO05D003872 2.3e-31 139.0 115 58.3
ECA238G4809 Erigeron canadensis HOM05D003473 ORTHO05D003872 3.0e-31 138.7 113 55.8
Peaxi162Scf00718g00014 Petunia axillaris HOM05D003473 ORTHO05D003872 3.0e-31 138.7 112 55.4
TWI56G1190 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 3.0e-31 138.7 113 57.5
ATR0736G092 Amborella trichopoda HOM05D003473 ORTHO05D003872 4.0e-31 138.3 113 56.6
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 4.0e-31 138.3 113 57.5
SGA_v2.0_scaffold2G01010 Striga asiatica HOM05D003473 ORTHO05D003872 5.2e-31 137.9 111 56.8
Nitab4.5_0001913g0170 Nicotiana tabacum HOM05D003473 ORTHO05D003872 8.9e-31 137.1 112 57.1
Rhsim09G0135200 Rhododendron simsii HOM05D003473 ORTHO05D003872 8.9e-31 137.1 113 54.0
vmacro10372 Vaccinium macrocarpon HOM05D003473 ORTHO05D003872 8.9e-31 137.1 113 52.2
EL10Ac4g08995 Beta vulgaris HOM05D003473 ORTHO05D003872 1.2e-30 136.7 115 58.3
Psat3g006840 Pisum sativum HOM05D003473 ORTHO05D003872 1.2e-30 136.7 115 55.7
RhsimUnG0083500 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.2e-30 136.7 113 53.1
Rhsim09G0135600 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.5e-30 136.3 113 54.0
COL.COLO4_15495 Corchorus olitorius HOM05D003473 ORTHO05D003872 2.0e-30 136.0 99 61.6
Migut.F01540 Erythranthe guttata HOM05D003473 ORTHO05D003872 2.6e-30 135.6 113 53.1
Solyc06g036640.4 Solanum lycopersicum HOM05D003473 ORTHO05D003872 8.3e-29 130.6 114 54.4
unitig_749.g14016 Utricularia gibba HOM05D003473 ORTHO05D003872 1.1e-28 130.2 113 51.3
CSS0019381 Camellia sinensis var. sinensis HOM05D003473 ORTHO05D003872 1.4e-28 129.8 129 50.4
Sopen06g012690 Solanum pennellii HOM05D003473 ORTHO05D003872 1.4e-28 129.8 114 54.4
CDE08G1169 Ceratophyllum demersum HOM05D003473 ORTHO05D003872 1.8e-28 129.4 113 54.0
DCAR_030022 Daucus carota HOM05D003473 ORTHO05D003872 2.4e-28 129.0 80 67.5
Oeu014528.1 Olea europaea HOM05D003473 ORTHO05D003872 2.4e-28 129.0 113 52.2
CAN.G24.3 Capsicum annuum HOM05D003473 ORTHO05D003872 3.2e-28 128.6 114 55.3
Os02g0809500 Oryza sativa ssp. japonica HOM05D003473 ORTHO05D003872 3.2e-28 128.6 112 53.6
Eucgr.B02425 Eucalyptus grandis HOM05D003473 ORTHO05D003872 7.0e-28 127.5 112 55.4
PGSC0003DMG400028063 Solanum tuberosum HOM05D003473 ORTHO05D003872 1.2e-27 126.7 114 55.3
Ca_10021_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 2.7e-27 125.6 99 60.6
Ca_29585_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 2.7e-27 125.6 99 60.6
SalBow6G1341 Salvia bowleyana HOM05D003473 ORTHO05D003872 2.7e-27 125.6 136 42.6
MBI07_g31076_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 4.6e-27 124.8 102 56.9
MBI07_g26633_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 7.8e-27 124.0 113 52.2
Rhsim09G0136100 Rhododendron simsii HOM05D003473 ORTHO05D003872 7.8e-27 124.0 113 48.7
Rhsim09G0136500 Rhododendron simsii HOM05D003473 ORTHO05D003872 7.8e-27 124.0 113 49.6
SEGI_25367 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 7.8e-27 124.0 113 47.8
Eucgr.B02152 Eucalyptus grandis HOM05D003473 ORTHO05D003872 1.7e-26 122.9 144 45.1
Rhsim09G0136000 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.7e-26 122.9 114 48.2
SMO241G0014 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.3e-26 122.5 115 48.7
Atru.chr2.998 Acer truncatum HOM05D003473 ORTHO05D003872 6.6e-26 120.9 96 58.3
SMO241G0019 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 8.6e-26 120.6 116 48.3
SMO232G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.5e-25 119.0 115 47.8
AagrBONN_evm.TU.Sc2ySwM_344.2023 Anthoceros agrestis HOM05D003473 ORTHO05D003872 3.3e-25 118.6 115 49.6
SMO235G0055 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 5.6e-25 117.9 110 47.3
SMO232G0037 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.3e-25 117.5 116 47.4
SMO347G0181 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.3e-25 117.5 110 47.3
SMO351G0391 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.3e-25 117.5 112 47.3
SMO232G0128 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-24 116.7 115 46.1
AagrBONN_evm.TU.Sc2ySwM_344.2742 Anthoceros agrestis HOM05D003473 ORTHO05D003872 1.0e-23 113.6 111 46.8
Rhsim09G0136400 Rhododendron simsii HOM05D003473 ORTHO05D003872 6.8e-23 110.9 131 42.0
AagrBONN_evm.TU.Sc2ySwM_228.1714 Anthoceros agrestis HOM05D003473 ORTHO05D003872 2.0e-22 109.4 113 46.9
AagrBONN_evm.TU.Sc2ySwM_228.1715 Anthoceros agrestis HOM05D003473 ORTHO05D003872 3.4e-22 108.6 115 47.0
SMO116G0126 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.4e-22 108.2 114 44.7
SMO351G0042 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 9.8e-22 107.1 116 44.8
AagrBONN_evm.TU.Sc2ySwM_228.1748 Anthoceros agrestis HOM05D003473 ORTHO05D003872 6.4e-21 104.4 111 45.0
SMO145G0097 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 6.4e-21 104.4 107 46.7
SMO241G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 8.3e-21 104.0 114 42.1
CBR_g57532 Chara braunii HOM05D003473 ORTHO05D003872 1.1e-20 103.6 81 51.9
Sabra19G0032100 Salix brachista HOM05D003473 ORTHO05D003872 1.2e-19 100.1 69 59.4
SMO232G0138 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 3.0e-18 95.5 107 39.3
CBR_g34948 Chara braunii HOM05D003473 ORTHO05D003872 1.9e-17 92.8 74 54.1
AagrBONN_evm.TU.Sc2ySwM_228.1749 Anthoceros agrestis HOM05D003473 ORTHO05D003872 2.5e-17 92.4 68 58.8
Carub.0048s0001 Capsella rubella HOM05D003473 ORTHO05D003872 4.3e-17 91.7 107 48.6
SMO232G0114 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.3e-17 90.9 101 41.6
SMO241G0018 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 8.1e-16 87.4 70 48.6
SGA_v2.0_scaffold18G08388 Striga asiatica HOM05D003473 ORTHO05D003872 3.7e-13 78.6 108 37.0
SGA_v2.0_scaffold26G11350 Striga asiatica HOM05D003473 ORTHO05D003872 3.2e-12 75.5 111 37.8
SMO241G0005 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 3.0e-10 68.9 69 44.9
SGA_v2.0_scaffold90G27648 Striga asiatica HOM05D003473 ORTHO05D003872 8.6e-10 67.4 68 39.7
CBR_g1013 Chara braunii HOM05D003473 ORTHO05D003872 3.3e-09 65.5 84 41.7
CBR_g48364 Chara braunii HOM05D003473 ORTHO05D003872 4.3e-09 65.1 70 40.0
Rhsim09G0136200 Rhododendron simsii HOM05D003473 ORTHO05D003872 4.3e-09 65.1 109 34.9
CBR_g40386 Chara braunii HOM05D003473 ORTHO05D003872 1.2e-08 63.5 68 44.1
CBR_g48367 Chara braunii HOM05D003473 ORTHO05D003872 4.7e-08 61.6 70 37.1
CBR_g23900 Chara braunii HOM05D003473 ORTHO05D003872 1.8e-07 59.7 69 34.8
SGA_v2.0_scaffold158G37446 Striga asiatica HOM05D003473 ORTHO05D003872 1.8e-07 59.7 62 40.3


User provided reference genes

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